Planaria EST Database

DrC_00380

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00380
         (1510 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P41383|TBA2_PATVU  Tubulin alpha-2/alpha-4 chain               869   0.0  
sp|P05214|TBA3_MOUSE  Tubulin alpha-3/alpha-7 chain (Alpha-t...   867   0.0  
sp|P68369|TBA1_MOUSE  Tubulin alpha-1 chain (Alpha-tubulin 1...   866   0.0  
sp|P06603|TBA1_DROME  Tubulin alpha-1 chain                       866   0.0  
sp|P18258|TBA1_PARLI  Tubulin alpha-1 chain                       865   0.0  
sp|P18288|TBAT_ONCMY  Tubulin alpha chain, testis-specific        865   0.0  
sp|P06605|TBA3_DROME  Tubulin alpha-3 chain                       862   0.0  
sp|P68361|TBA1_CRIGR  Tubulin alpha-1 chain (Alpha-tubulin 1...   862   0.0  
sp|Q8T6A5|TBA1_APLCA  Tubulin alpha-1 chain                       862   0.0  
sp|P52273|TBA_BOMMO  Tubulin alpha chain                          862   0.0  

>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
          Length = 452

 Score =  869 bits (2245), Expect = 0.0
 Identities = 420/440 (95%), Positives = 428/440 (97%)
 Frame = +3

Query: 24   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
            MRECISVH+GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISVHIGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 204  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
            HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD 120

Query: 384  RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
            RIRKLADQCTGLQGFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQI+TA
Sbjct: 121  RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTA 180

Query: 564  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 744  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 923
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300

Query: 924  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1103
            QMVKCDPRHGKYM+CCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMSCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1104 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1283
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1284 AREDLAALEKDYEEVGIDSV 1343
            AREDLAALEKDYEEVG+DSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440

>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
            isotype M-alpha-3/7)
 sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
 sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
          Length = 450

 Score =  867 bits (2241), Expect = 0.0
 Identities = 421/440 (95%), Positives = 427/440 (97%)
 Frame = +3

Query: 24   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
            MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 204  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
            HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 384  RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
            RIRKLAD CTGLQGFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121  RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 564  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 744  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 923
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 924  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1103
            QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1104 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1283
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1284 AREDLAALEKDYEEVGIDSV 1343
            AREDLAALEKDYEEVG+DSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440

>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
            M-alpha-1)
 sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
 sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
 sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
          Length = 451

 Score =  866 bits (2237), Expect = 0.0
 Identities = 416/440 (94%), Positives = 428/440 (97%)
 Frame = +3

Query: 24   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
            MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 204  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 384  RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
            RIRKLADQCTGLQGFL+FH            LLMERLSVDYGKKSKLEF++YPAPQ++TA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 564  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 744  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 923
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 924  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1103
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1104 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1283
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1284 AREDLAALEKDYEEVGIDSV 1343
            ARED+AALEKDYEEVG+DSV
Sbjct: 421  AREDMAALEKDYEEVGVDSV 440

>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
          Length = 450

 Score =  866 bits (2237), Expect = 0.0
 Identities = 419/439 (95%), Positives = 426/439 (97%)
 Frame = +3

Query: 24   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
            MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 60

Query: 204  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
            HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 384  RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
            RIRKLADQCTGLQGFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121  RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 564  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 744  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 923
            SLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 924  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1103
            QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1104 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1283
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1284 AREDLAALEKDYEEVGIDS 1340
            AREDLAALEKDYEEVG+DS
Sbjct: 421  AREDLAALEKDYEEVGMDS 439

>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
          Length = 452

 Score =  865 bits (2235), Expect = 0.0
 Identities = 417/439 (94%), Positives = 427/439 (97%)
 Frame = +3

Query: 24   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
            MRECIS+HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 204  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
            HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLD 120

Query: 384  RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
            RIRKLADQCTGLQGFLIFH            LLMERLSVDYGKKSKLEFAVYPAPQI+TA
Sbjct: 121  RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTA 180

Query: 564  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 744  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 923
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+V+EITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPAN 300

Query: 924  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1103
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1104 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1283
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1284 AREDLAALEKDYEEVGIDS 1340
            AREDLAALEKDYEEVG+DS
Sbjct: 421  AREDLAALEKDYEEVGVDS 439

>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
          Length = 450

 Score =  865 bits (2235), Expect = 0.0
 Identities = 418/440 (95%), Positives = 426/440 (96%)
 Frame = +3

Query: 24   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
            MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 204  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
            HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 384  RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
            R+RKL+DQCTGLQGFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121  RVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 564  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 744  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 923
            SLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE LSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPAN 300

Query: 924  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1103
            QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1104 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1283
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1284 AREDLAALEKDYEEVGIDSV 1343
            AREDLAALEKDYEEVG+DSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440

>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
          Length = 450

 Score =  862 bits (2228), Expect = 0.0
 Identities = 419/439 (95%), Positives = 425/439 (96%)
 Frame = +3

Query: 24   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
            MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 60

Query: 204  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
            HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 384  RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
            RIRKLADQCTGLQGFLIFH            LLMERLSVDYGKKSKLEFAVYPAPQ++TA
Sbjct: 121  RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA 180

Query: 564  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 744  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 923
            SLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 924  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1103
            QMVK DPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1104 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1283
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1284 AREDLAALEKDYEEVGIDS 1340
            AREDLAALEKDYEEVG+DS
Sbjct: 421  AREDLAALEKDYEEVGMDS 439

>sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin I)
 sp|P68363|TBAK_HUMAN Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
            K-alpha-1)
 sp|P05213|TBA2_MOUSE Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin isotype
            M-alpha-2)
 sp|P68360|TBA1_MERUN Tubulin alpha-1 chain (Alpha-tubulin 1)
 sp|Q6P9V9|TBA2_RAT Tubulin alpha-2 chain (Alpha-tubulin 2)
          Length = 451

 Score =  862 bits (2227), Expect = 0.0
 Identities = 414/440 (94%), Positives = 427/440 (97%)
 Frame = +3

Query: 24   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
            MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 204  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 384  RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
            RIRKLADQCTGLQGFL+FH            LLMERLSVDYGKKSKLEF++YPAPQ++TA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 564  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 744  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 923
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 924  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1103
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1104 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1283
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1284 AREDLAALEKDYEEVGIDSV 1343
            ARED+AALEKDYEEVG+DSV
Sbjct: 421  AREDMAALEKDYEEVGVDSV 440

>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain
          Length = 451

 Score =  862 bits (2227), Expect = 0.0
 Identities = 415/440 (94%), Positives = 428/440 (97%)
 Frame = +3

Query: 24   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
            MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 204  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
            HVPRAVFVDLEP+VVDEVR+GTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLD
Sbjct: 61   HVPRAVFVDLEPSVVDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 120

Query: 384  RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
            RIRKLADQCTGLQGFLIFH            LLMERLSVDYGKKSKLEF+VYPAPQ++TA
Sbjct: 121  RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTA 180

Query: 564  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240

Query: 744  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 923
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 924  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1103
            Q+VKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QLVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1104 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1283
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1284 AREDLAALEKDYEEVGIDSV 1343
            AREDLAALEKDYEEVG+DSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440

>sp|P52273|TBA_BOMMO Tubulin alpha chain
          Length = 450

 Score =  862 bits (2226), Expect = 0.0
 Identities = 418/439 (95%), Positives = 425/439 (96%)
 Frame = +3

Query: 24   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
            MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 60

Query: 204  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
            HVPRA+FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61   HVPRALFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 384  RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
            RIRKLADQCTGLQGFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121  RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 564  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE PTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEPPTYTNLNRLIGQIVSSITA 240

Query: 744  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 923
            SLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 924  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1103
            QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1104 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1283
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1284 AREDLAALEKDYEEVGIDS 1340
            AREDLAALEKDYEEVG+DS
Sbjct: 421  AREDLAALEKDYEEVGMDS 439

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,275,286
Number of Sequences: 369166
Number of extensions: 3340967
Number of successful extensions: 9465
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8904
length of database: 68,354,980
effective HSP length: 115
effective length of database: 47,110,455
effective search space used: 18231746085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00380

  1. Dr_sW_028_H04
  2. Dr_sW_010_H24
  3. Dr_sW_024_P07
  4. Dr_sW_003_F12
  5. Dr_sW_026_D02
  6. Dr_sW_010_E12
  7. Dr_sW_013_J22
  8. Dr_sW_013_E21
  9. Dr_sW_001_O01
  10. Dr_sW_024_E07
  11. Dr_sW_001_L24
  12. Dr_sW_010_J24
  13. Dr_sW_008_O24
  14. Dr_sW_009_E21
  15. Dr_sW_004_G13
  16. Dr_sW_013_E20
  17. Dr_sW_026_O07
  18. Dr_sW_007_I19
  19. Dr_sW_003_G03
  20. Dr_sW_008_C05
  21. Dr_sW_006_F20
  22. Dr_sW_001_O02
  23. Dr_sW_010_J09
  24. Dr_sW_017_P09
  25. Dr_sW_020_C08
  26. Dr_sW_022_P20
  27. Dr_sW_016_M20
  28. Dr_sW_018_O18
  29. Dr_sW_002_I05
  30. Dr_sW_009_B17
  31. Dr_sW_027_E17
  32. Dr_sW_023_O19
  33. Dr_sW_004_C02
  34. Dr_sW_003_M16
  35. Dr_sW_023_F07
  36. Dr_sW_020_C17
  37. Dr_sW_014_O20
  38. Dr_sW_023_I05
  39. Dr_sW_007_M20
  40. Dr_sW_013_I22
  41. Dr_sW_019_H10
  42. Dr_sW_005_G03
  43. Dr_sW_025_O23
  44. Dr_sW_012_C24
  45. Dr_sW_014_F09
  46. Dr_sW_010_N15
  47. Dr_sW_007_O10
  48. Dr_sW_021_P14
  49. Dr_sW_007_M24
  50. Dr_sW_018_F18
  51. Dr_sW_017_J20
  52. Dr_sW_026_D08
  53. Dr_sW_016_M23
  54. Dr_sW_013_L22
  55. Dr_sW_007_I13
  56. Dr_sW_016_F20
  57. Dr_sW_013_P22