Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_C17
(825 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 559 e-159
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 557 e-158
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 557 e-158
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 556 e-158
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 556 e-158
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 555 e-158
sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain 555 e-158
sp|P52273|TBA_BOMMO Tubulin alpha chain 555 e-158
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 554 e-157
sp|P02550|TBA_PIG Tubulin alpha chain 553 e-157
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 559 bits (1440), Expect = e-159
Identities = 270/274 (98%), Positives = 274/274 (100%)
Frame = +3
Query: 3 RLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 182
RLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 156 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215
Query: 183 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 362
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
Sbjct: 216 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 275
Query: 363 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATI 542
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNA+IATI
Sbjct: 276 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI 335
Query: 543 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 722
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 336 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395
Query: 723 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 824
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 557 bits (1436), Expect = e-158
Identities = 269/274 (98%), Positives = 273/274 (99%)
Frame = +3
Query: 3 RLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 182
RLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 156 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215
Query: 183 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 362
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPV
Sbjct: 216 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 275
Query: 363 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATI 542
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNA+IATI
Sbjct: 276 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI 335
Query: 543 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 722
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 336 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395
Query: 723 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 824
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 557 bits (1435), Expect = e-158
Identities = 269/274 (98%), Positives = 274/274 (100%)
Frame = +3
Query: 3 RLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 182
RLSVDYGKKSKLEFA+YPAPQI+TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 156 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215
Query: 183 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 362
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
Sbjct: 216 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 275
Query: 363 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATI 542
ISAEKAYHEQL+VAEITNACFEPANQMVKCDPRHGKYM+CCMLYRGDVVPKDVNA+IATI
Sbjct: 276 ISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMSCCMLYRGDVVPKDVNAAIATI 335
Query: 543 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 722
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 336 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395
Query: 723 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 824
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 556 bits (1433), Expect = e-158
Identities = 269/274 (98%), Positives = 274/274 (100%)
Frame = +3
Query: 3 RLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 182
RLSVDYGKKSKLEFAVYPAPQI+TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 156 RLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215
Query: 183 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 362
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
Sbjct: 216 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 275
Query: 363 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATI 542
ISAEKAYHEQL+V+EITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNA+IATI
Sbjct: 276 ISAEKAYHEQLTVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 335
Query: 543 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 722
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 336 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395
Query: 723 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 824
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 556 bits (1432), Expect = e-158
Identities = 267/274 (97%), Positives = 274/274 (100%)
Frame = +3
Query: 3 RLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 182
RLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 156 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215
Query: 183 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 362
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
Sbjct: 216 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 275
Query: 363 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATI 542
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNA+IATI
Sbjct: 276 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 335
Query: 543 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 722
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 336 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395
Query: 723 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 824
DLMYAKRAFVHWYVGEGMEEGEFSEARED+AALE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALE 429
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 555 bits (1431), Expect = e-158
Identities = 268/274 (97%), Positives = 272/274 (99%)
Frame = +3
Query: 3 RLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 182
RLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 156 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215
Query: 183 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 362
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPV
Sbjct: 216 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 275
Query: 363 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATI 542
ISAEKAYHE LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNA+IATI
Sbjct: 276 ISAEKAYHEMLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI 335
Query: 543 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 722
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 336 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395
Query: 723 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 824
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain
Length = 451
Score = 555 bits (1431), Expect = e-158
Identities = 268/274 (97%), Positives = 274/274 (100%)
Frame = +3
Query: 3 RLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 182
RLSVDYGKKSKLEF+VYPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 156 RLSVDYGKKSKLEFSVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215
Query: 183 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 362
NLDIERP+YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
Sbjct: 216 NLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 275
Query: 363 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATI 542
ISAEKAYHEQLSVAEITNACFEPANQ+VKCDPRHGKYMACCMLYRGDVVPKDVNA+IATI
Sbjct: 276 ISAEKAYHEQLSVAEITNACFEPANQLVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI 335
Query: 543 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 722
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 336 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395
Query: 723 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 824
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
>sp|P52273|TBA_BOMMO Tubulin alpha chain
Length = 450
Score = 555 bits (1429), Expect = e-158
Identities = 268/274 (97%), Positives = 272/274 (99%)
Frame = +3
Query: 3 RLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 182
RLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 156 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215
Query: 183 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 362
NLDIE PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPV
Sbjct: 216 NLDIEPPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 275
Query: 363 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATI 542
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNA+IATI
Sbjct: 276 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI 335
Query: 543 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 722
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 336 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395
Query: 723 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 824
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 554 bits (1427), Expect = e-157
Identities = 269/274 (98%), Positives = 272/274 (99%)
Frame = +3
Query: 3 RLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 182
RLSVDYGKKSKLEFAVYPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 156 RLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215
Query: 183 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 362
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPV
Sbjct: 216 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 275
Query: 363 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATI 542
ISAEKAYHEQLSVAEITNACFEPANQMVK DPRHGKYMACCMLYRGDVVPKDVNA+IATI
Sbjct: 276 ISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATI 335
Query: 543 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 722
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 336 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395
Query: 723 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 824
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
>sp|P02550|TBA_PIG Tubulin alpha chain
Length = 451
Score = 553 bits (1424), Expect = e-157
Identities = 265/274 (96%), Positives = 273/274 (99%)
Frame = +3
Query: 3 RLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 182
RLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 156 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215
Query: 183 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 362
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPR HFPLATYAPV
Sbjct: 216 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRAHFPLATYAPV 275
Query: 363 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATI 542
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNA+IATI
Sbjct: 276 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 335
Query: 543 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 722
KTKRTIQFVDWCPTGFKVGINY+PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 336 KTKRTIQFVDWCPTGFKVGINYEPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395
Query: 723 DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 824
DLMYAKRAFVHWYVGEGMEEGEFSEARED+AALE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALE 429
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,165,312
Number of Sequences: 369166
Number of extensions: 2202300
Number of successful extensions: 6254
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6008
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7956112725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)