Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_I19
(889 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 546 e-155
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 546 e-155
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 546 e-155
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 545 e-155
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 545 e-155
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 544 e-154
sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1... 543 e-154
sp|Q5R1W4|TBAK_PANTR Tubulin alpha-ubiquitous chain (Alpha-... 543 e-154
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 543 e-154
sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6) 542 e-154
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 546 bits (1407), Expect = e-155
Identities = 267/283 (94%), Positives = 270/283 (95%)
Frame = +2
Query: 41 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76
Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 136
Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
IFH LLMERLSVDYGKKSKLEFAVYPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
TNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 299
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 546 bits (1407), Expect = e-155
Identities = 266/283 (93%), Positives = 271/283 (95%)
Frame = +2
Query: 41 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76
Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQCTGLQGFL 136
Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
IFH LLMERLSVDYGKKSKLEFA+YPAPQI+TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 196
Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
TNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPA 299
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 546 bits (1406), Expect = e-155
Identities = 266/283 (93%), Positives = 270/283 (95%)
Frame = +2
Query: 41 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76
Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 136
Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
IFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
TNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 299
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 545 bits (1405), Expect = e-155
Identities = 264/283 (93%), Positives = 271/283 (95%)
Frame = +2
Query: 41 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV+D
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVID 76
Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136
Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 545 bits (1404), Expect = e-155
Identities = 267/283 (94%), Positives = 270/283 (95%)
Frame = +2
Query: 41 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76
Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD CTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFL 136
Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
IFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 544 bits (1401), Expect = e-154
Identities = 264/283 (93%), Positives = 271/283 (95%)
Frame = +2
Query: 41 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76
Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQCTGLQGFL 136
Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
IFH LLMERLSVDYGKKSKLEFAVYPAPQI+TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLE 196
Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
TNLVPYPRIHFPLATYAPVISAEKAYHEQL+V+EITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPA 299
>sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin I)
sp|P68363|TBAK_HUMAN Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
K-alpha-1)
sp|P05213|TBA2_MOUSE Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin isotype
M-alpha-2)
sp|P68360|TBA1_MERUN Tubulin alpha-1 chain (Alpha-tubulin 1)
sp|Q6P9V9|TBA2_RAT Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 451
Score = 543 bits (1399), Expect = e-154
Identities = 263/283 (92%), Positives = 270/283 (95%)
Frame = +2
Query: 41 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV+D
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVID 76
Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136
Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ 256
Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
>sp|Q5R1W4|TBAK_PANTR Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
K-alpha-1)
Length = 451
Score = 543 bits (1399), Expect = e-154
Identities = 263/283 (92%), Positives = 270/283 (95%)
Frame = +2
Query: 41 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV+D
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVID 76
Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136
Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ 256
Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 543 bits (1398), Expect = e-154
Identities = 264/283 (93%), Positives = 269/283 (95%)
Frame = +2
Query: 41 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76
Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR+RKL+DQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQCTGLQGFL 136
Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
IFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
TNLVPYPRIHFPL TYAPVISAEKAYHE LSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPA 299
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
Length = 451
Score = 542 bits (1396), Expect = e-154
Identities = 262/283 (92%), Positives = 270/283 (95%)
Frame = +2
Query: 41 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV+D
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVID 76
Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136
Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ 256
Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
TNLVPYPRIHFPLATYAPVISAEKAYHEQLSV+EITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPA 299
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,378,200
Number of Sequences: 369166
Number of extensions: 2080456
Number of successful extensions: 6204
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5922
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8886314050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)