Planarian EST Database


Dr_sW_007_I19

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_007_I19
         (889 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P06605|TBA3_DROME  Tubulin alpha-3 chain                       546   e-155
sp|P41383|TBA2_PATVU  Tubulin alpha-2/alpha-4 chain               546   e-155
sp|P06603|TBA1_DROME  Tubulin alpha-1 chain                       546   e-155
sp|P68369|TBA1_MOUSE  Tubulin alpha-1 chain (Alpha-tubulin 1...   545   e-155
sp|P05214|TBA3_MOUSE  Tubulin alpha-3/alpha-7 chain (Alpha-t...   545   e-155
sp|P18258|TBA1_PARLI  Tubulin alpha-1 chain                       544   e-154
sp|P68361|TBA1_CRIGR  Tubulin alpha-1 chain (Alpha-tubulin 1...   543   e-154
sp|Q5R1W4|TBAK_PANTR  Tubulin alpha-ubiquitous chain (Alpha-...   543   e-154
sp|P18288|TBAT_ONCMY  Tubulin alpha chain, testis-specific        543   e-154
sp|P36220|TBA_TORMA  Tubulin alpha chain (Alpha T6)               542   e-154
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
          Length = 450

 Score =  546 bits (1407), Expect = e-155
 Identities = 267/283 (94%), Positives = 270/283 (95%)
 Frame = +2

Query: 41  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
           GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17  GNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76

Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
           EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL
Sbjct: 77  EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 136

Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
           IFH            LLMERLSVDYGKKSKLEFAVYPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLE 196

Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
           HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256

Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
           TNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 299
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
          Length = 452

 Score =  546 bits (1407), Expect = e-155
 Identities = 266/283 (93%), Positives = 271/283 (95%)
 Frame = +2

Query: 41  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
           GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76

Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
           EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77  EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQCTGLQGFL 136

Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
           IFH            LLMERLSVDYGKKSKLEFA+YPAPQI+TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 196

Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
           HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256

Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
           TNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPA 299
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
          Length = 450

 Score =  546 bits (1406), Expect = e-155
 Identities = 266/283 (93%), Positives = 270/283 (95%)
 Frame = +2

Query: 41  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
           GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17  GNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76

Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
           EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL
Sbjct: 77  EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 136

Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
           IFH            LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196

Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
           HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256

Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
           TNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 299
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
           M-alpha-1)
 sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
 sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
 sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
          Length = 451

 Score =  545 bits (1405), Expect = e-155
 Identities = 264/283 (93%), Positives = 271/283 (95%)
 Frame = +2

Query: 41  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
           GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV+D
Sbjct: 17  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVID 76

Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
           EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77  EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136

Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
           +FH            LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196

Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
           HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256

Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
           TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
           isotype M-alpha-3/7)
 sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
 sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
          Length = 450

 Score =  545 bits (1404), Expect = e-155
 Identities = 267/283 (94%), Positives = 270/283 (95%)
 Frame = +2

Query: 41  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
           GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76

Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
           EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD CTGLQGFL
Sbjct: 77  EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFL 136

Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
           IFH            LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196

Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
           HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256

Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
           TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
          Length = 452

 Score =  544 bits (1401), Expect = e-154
 Identities = 264/283 (93%), Positives = 271/283 (95%)
 Frame = +2

Query: 41  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
           GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76

Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
           EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRIRKLADQCTGLQGFL
Sbjct: 77  EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQCTGLQGFL 136

Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
           IFH            LLMERLSVDYGKKSKLEFAVYPAPQI+TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLE 196

Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
           HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256

Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
           TNLVPYPRIHFPLATYAPVISAEKAYHEQL+V+EITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPA 299
>sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin I)
 sp|P68363|TBAK_HUMAN Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
           K-alpha-1)
 sp|P05213|TBA2_MOUSE Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin isotype
           M-alpha-2)
 sp|P68360|TBA1_MERUN Tubulin alpha-1 chain (Alpha-tubulin 1)
 sp|Q6P9V9|TBA2_RAT Tubulin alpha-2 chain (Alpha-tubulin 2)
          Length = 451

 Score =  543 bits (1399), Expect = e-154
 Identities = 263/283 (92%), Positives = 270/283 (95%)
 Frame = +2

Query: 41  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
           GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV+D
Sbjct: 17  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVID 76

Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
           EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77  EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136

Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
           +FH            LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196

Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
           HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ 256

Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
           TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
>sp|Q5R1W4|TBAK_PANTR Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
           K-alpha-1)
          Length = 451

 Score =  543 bits (1399), Expect = e-154
 Identities = 263/283 (92%), Positives = 270/283 (95%)
 Frame = +2

Query: 41  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
           GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV+D
Sbjct: 17  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVID 76

Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
           EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77  EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136

Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
           +FH            LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196

Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
           HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ 256

Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
           TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
          Length = 450

 Score =  543 bits (1398), Expect = e-154
 Identities = 264/283 (93%), Positives = 269/283 (95%)
 Frame = +2

Query: 41  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
           GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76

Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
           EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR+RKL+DQCTGLQGFL
Sbjct: 77  EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQCTGLQGFL 136

Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
           IFH            LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196

Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
           HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256

Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
           TNLVPYPRIHFPL TYAPVISAEKAYHE LSVAEITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPA 299
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
          Length = 451

 Score =  542 bits (1396), Expect = e-154
 Identities = 262/283 (92%), Positives = 270/283 (95%)
 Frame = +2

Query: 41  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 220
           GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV+D
Sbjct: 17  GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVID 76

Query: 221 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 400
           EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77  EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136

Query: 401 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 580
           +FH            LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196

Query: 581 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 760
           HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ 256

Query: 761 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 889
           TNLVPYPRIHFPLATYAPVISAEKAYHEQLSV+EITNACFEPA
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPA 299
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,378,200
Number of Sequences: 369166
Number of extensions: 2080456
Number of successful extensions: 6204
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5922
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8886314050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)