Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_I05
(835 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 534 e-151
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 533 e-151
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 533 e-151
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 532 e-151
sp|P52273|TBA_BOMMO Tubulin alpha chain 531 e-151
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 530 e-150
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 530 e-150
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 530 e-150
sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain 530 e-150
sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6) 529 e-150
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 534 bits (1375), Expect = e-151
Identities = 261/277 (94%), Positives = 264/277 (95%)
Frame = +3
Query: 3 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 182
RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKK 164
Query: 183 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 362
SKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224
Query: 363 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 542
TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHE 284
Query: 543 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 722
QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 723 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 833
DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 533 bits (1372), Expect = e-151
Identities = 261/277 (94%), Positives = 264/277 (95%)
Frame = +3
Query: 3 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 182
RGHYTIGKEIVDLVLDRIRKLAD CTGLQGFLIFH LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKK 164
Query: 183 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 362
SKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224
Query: 363 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 542
TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284
Query: 543 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 722
QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 723 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 833
DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 533 bits (1372), Expect = e-151
Identities = 259/277 (93%), Positives = 265/277 (95%)
Frame = +3
Query: 3 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 182
RGHYT+GKEI+DLVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKK
Sbjct: 105 RGHYTVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 164
Query: 183 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 362
SKLEFA+YPAPQI+TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224
Query: 363 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 542
TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284
Query: 543 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 722
QL+VAEITNACFEPANQMVKCDPRHGKYM+CCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLTVAEITNACFEPANQMVKCDPRHGKYMSCCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 723 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 833
DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 532 bits (1371), Expect = e-151
Identities = 258/277 (93%), Positives = 265/277 (95%)
Frame = +3
Query: 3 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 182
RGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL+FH LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK 164
Query: 183 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 362
SKLEF++YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224
Query: 363 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 542
TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284
Query: 543 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 722
QLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 723 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 833
DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
>sp|P52273|TBA_BOMMO Tubulin alpha chain
Length = 450
Score = 531 bits (1368), Expect = e-151
Identities = 260/277 (93%), Positives = 263/277 (94%)
Frame = +3
Query: 3 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 182
RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKK 164
Query: 183 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 362
SKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE PTY
Sbjct: 165 SKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEPPTY 224
Query: 363 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 542
TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHE 284
Query: 543 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 722
QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 723 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 833
DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 530 bits (1366), Expect = e-150
Identities = 257/277 (92%), Positives = 265/277 (95%)
Frame = +3
Query: 3 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 182
RGHYT+GKE++D+VLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKK
Sbjct: 105 RGHYTVGKELIDIVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 164
Query: 183 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 362
SKLEFAVYPAPQI+TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224
Query: 363 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 542
TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284
Query: 543 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 722
QL+V+EITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLTVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 723 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 833
DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 530 bits (1366), Expect = e-150
Identities = 258/277 (93%), Positives = 263/277 (94%)
Frame = +3
Query: 3 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 182
RGHYTIGKEIVDLVLDR+RKL+DQCTGLQGFLIFH LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIVDLVLDRVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKK 164
Query: 183 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 362
SKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224
Query: 363 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 542
TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHE 284
Query: 543 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 722
LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 MLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 723 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 833
DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 530 bits (1366), Expect = e-150
Identities = 261/277 (94%), Positives = 263/277 (94%)
Frame = +3
Query: 3 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 182
RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKK 164
Query: 183 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 362
SKLEFAVYPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224
Query: 363 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 542
TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHE 284
Query: 543 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 722
QLSVAEITNACFEPANQMVK DPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 723 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 833
DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain
Length = 451
Score = 530 bits (1366), Expect = e-150
Identities = 257/277 (92%), Positives = 265/277 (95%)
Frame = +3
Query: 3 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 182
RGHYT+GKE++DLVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKK
Sbjct: 105 RGHYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKK 164
Query: 183 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 362
SKLEF+VYPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP+Y
Sbjct: 165 SKLEFSVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSY 224
Query: 363 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 542
TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284
Query: 543 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 722
QLSVAEITNACFEPANQ+VKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLSVAEITNACFEPANQLVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 723 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 833
DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
>sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6)
Length = 449
Score = 529 bits (1362), Expect = e-150
Identities = 256/277 (92%), Positives = 264/277 (95%)
Frame = +3
Query: 3 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 182
RGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL+FH LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK 164
Query: 183 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 362
SKLEF++YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224
Query: 363 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 542
TNLNRLI QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 225 TNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284
Query: 543 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 722
QL+VAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 723 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 833
DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,422,104
Number of Sequences: 369166
Number of extensions: 1895175
Number of successful extensions: 5074
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4982
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8100769320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)