Planarian EST Database


Dr_sW_001_O01

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_001_O01
         (852 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P41383|TBA2_PATVU  Tubulin alpha-2/alpha-4 chain               520   e-147
sp|P18258|TBA1_PARLI  Tubulin alpha-1 chain                       519   e-147
sp|P06605|TBA3_DROME  Tubulin alpha-3 chain                       519   e-147
sp|P06603|TBA1_DROME  Tubulin alpha-1 chain                       518   e-147
sp|P18288|TBAT_ONCMY  Tubulin alpha chain, testis-specific        517   e-146
sp|P68369|TBA1_MOUSE  Tubulin alpha-1 chain (Alpha-tubulin 1...   516   e-146
sp|P05214|TBA3_MOUSE  Tubulin alpha-3/alpha-7 chain (Alpha-t...   516   e-146
sp|P36220|TBA_TORMA  Tubulin alpha chain (Alpha T6)               514   e-145
sp|P08537|TBA_XENLA  Tubulin alpha chain                          514   e-145
sp|Q9BQE3|TBA6_HUMAN  Tubulin alpha-6 chain (Alpha-tubulin 6)     514   e-145
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
          Length = 452

 Score =  520 bits (1339), Expect = e-147
 Identities = 252/269 (93%), Positives = 257/269 (95%)
 Frame = +1

Query: 1   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
           MRECISVH+GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1   MRECISVHIGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
           HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLD
Sbjct: 61  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD 120

Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
           RIRKLADQCTGLQGFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQI+TA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTA 180

Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
           VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
           SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 812 TYAPVISAEKAYH 850
           TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
          Length = 452

 Score =  519 bits (1336), Expect = e-147
 Identities = 251/269 (93%), Positives = 257/269 (95%)
 Frame = +1

Query: 1   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
           MRECIS+HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1   MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
           HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLD
Sbjct: 61  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLD 120

Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
           RIRKLADQCTGLQGFLIFH            LLMERLSVDYGKKSKLEFAVYPAPQI+TA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTA 180

Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
           VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
           SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 812 TYAPVISAEKAYH 850
           TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
          Length = 450

 Score =  519 bits (1336), Expect = e-147
 Identities = 252/269 (93%), Positives = 257/269 (95%)
 Frame = +1

Query: 1   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
           MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGK
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 60

Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
           HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
           RIRKLADQCTGLQGFLIFH            LLMERLSVDYGKKSKLEFAVYPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA 180

Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
           VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
           SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 812 TYAPVISAEKAYH 850
           TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
          Length = 450

 Score =  518 bits (1335), Expect = e-147
 Identities = 251/269 (93%), Positives = 257/269 (95%)
 Frame = +1

Query: 1   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
           MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGK
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 60

Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
           HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
           RIRKLADQCTGLQGFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
           VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
           SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 812 TYAPVISAEKAYH 850
           TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
          Length = 450

 Score =  517 bits (1332), Expect = e-146
 Identities = 250/269 (92%), Positives = 257/269 (95%)
 Frame = +1

Query: 1   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
           MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
           HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
           R+RKL+DQCTGLQGFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121 RVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
           VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
           SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 812 TYAPVISAEKAYH 850
           TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
           M-alpha-1)
 sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
 sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
 sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
          Length = 451

 Score =  516 bits (1330), Expect = e-146
 Identities = 248/269 (92%), Positives = 257/269 (95%)
 Frame = +1

Query: 1   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
           MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
           HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
           RIRKLADQCTGLQGFL+FH            LLMERLSVDYGKKSKLEF++YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
           VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
           SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 812 TYAPVISAEKAYH 850
           TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
           isotype M-alpha-3/7)
 sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
 sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
          Length = 450

 Score =  516 bits (1329), Expect = e-146
 Identities = 251/269 (93%), Positives = 256/269 (95%)
 Frame = +1

Query: 1   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
           MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
           HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61  HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
           RIRKLAD CTGLQGFLIFH            LLMERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
           VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
           SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 812 TYAPVISAEKAYH 850
           TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
          Length = 451

 Score =  514 bits (1324), Expect = e-145
 Identities = 247/269 (91%), Positives = 256/269 (95%)
 Frame = +1

Query: 1   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
           MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
           HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
           RIRKLADQCTGLQGFL+FH            LLMERLSVDYGKKSKLEF++YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
           VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
           SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 812 TYAPVISAEKAYH 850
           TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P08537|TBA_XENLA Tubulin alpha chain
          Length = 449

 Score =  514 bits (1324), Expect = e-145
 Identities = 247/269 (91%), Positives = 256/269 (95%)
 Frame = +1

Query: 1   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
           MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
           HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
           RIRKLADQCTGLQGFL+FH            LL+ERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLLERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
           VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
           SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 812 TYAPVISAEKAYH 850
           TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6)
          Length = 449

 Score =  514 bits (1324), Expect = e-145
 Identities = 247/269 (91%), Positives = 256/269 (95%)
 Frame = +1

Query: 1   MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
           MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
           HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
           RIRKLADQCTGLQGFL+FH            LLMERLSVDYGKKSKLEF++YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
           VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
           SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 812 TYAPVISAEKAYH 850
           TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,850,494
Number of Sequences: 369166
Number of extensions: 2017552
Number of successful extensions: 6001
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5681
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)