Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_O01
(852 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 520 e-147
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 519 e-147
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 519 e-147
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 518 e-147
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 517 e-146
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 516 e-146
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 516 e-146
sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6) 514 e-145
sp|P08537|TBA_XENLA Tubulin alpha chain 514 e-145
sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6) 514 e-145
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 520 bits (1339), Expect = e-147
Identities = 252/269 (93%), Positives = 257/269 (95%)
Frame = +1
Query: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
MRECISVH+GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISVHIGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD 120
Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
RIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQI+TA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTA 180
Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 812 TYAPVISAEKAYH 850
TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 519 bits (1336), Expect = e-147
Identities = 251/269 (93%), Positives = 257/269 (95%)
Frame = +1
Query: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
MRECIS+HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLD 120
Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
RIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQI+TA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTA 180
Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 812 TYAPVISAEKAYH 850
TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 519 bits (1336), Expect = e-147
Identities = 252/269 (93%), Positives = 257/269 (95%)
Frame = +1
Query: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 60
Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
RIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA 180
Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 812 TYAPVISAEKAYH 850
TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 518 bits (1335), Expect = e-147
Identities = 251/269 (93%), Positives = 257/269 (95%)
Frame = +1
Query: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 60
Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
RIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 812 TYAPVISAEKAYH 850
TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 517 bits (1332), Expect = e-146
Identities = 250/269 (92%), Positives = 257/269 (95%)
Frame = +1
Query: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
R+RKL+DQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121 RVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 812 TYAPVISAEKAYH 850
TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 516 bits (1330), Expect = e-146
Identities = 248/269 (92%), Positives = 257/269 (95%)
Frame = +1
Query: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
RIRKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 812 TYAPVISAEKAYH 850
TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 516 bits (1329), Expect = e-146
Identities = 251/269 (93%), Positives = 256/269 (95%)
Frame = +1
Query: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
RIRKLAD CTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 812 TYAPVISAEKAYH 850
TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
Length = 451
Score = 514 bits (1324), Expect = e-145
Identities = 247/269 (91%), Positives = 256/269 (95%)
Frame = +1
Query: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
RIRKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 812 TYAPVISAEKAYH 850
TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|P08537|TBA_XENLA Tubulin alpha chain
Length = 449
Score = 514 bits (1324), Expect = e-145
Identities = 247/269 (91%), Positives = 256/269 (95%)
Frame = +1
Query: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
RIRKLADQCTGLQGFL+FH LL+ERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLLERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 812 TYAPVISAEKAYH 850
TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
>sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6)
Length = 449
Score = 514 bits (1324), Expect = e-145
Identities = 247/269 (91%), Positives = 256/269 (95%)
Frame = +1
Query: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 180
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 181 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 360
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 361 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 540
RIRKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 541 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 720
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 721 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 807
SLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 812 TYAPVISAEKAYH 850
TYAPVISAEKAYH
Sbjct: 271 TYAPVISAEKAYH 283
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,850,494
Number of Sequences: 369166
Number of extensions: 2017552
Number of successful extensions: 6001
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5681
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)