Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_E12
(875 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 507 e-143
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 506 e-143
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 506 e-143
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 506 e-143
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 505 e-143
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 504 e-142
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 504 e-142
sp|P02550|TBA_PIG Tubulin alpha chain 503 e-142
sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6) 502 e-142
sp|P08537|TBA_XENLA Tubulin alpha chain 502 e-142
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 507 bits (1305), Expect = e-143
Identities = 247/270 (91%), Positives = 254/270 (94%)
Frame = +3
Query: 24 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
MRECIS+H+GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISVHIGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 204 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD 120
Query: 384 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
RIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQI+TA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTA 180
Query: 564 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 744 SLRFDGALNVDLTEFQTNLVPYPESISHWP 833
SLRFDGALNVDLTEFQTNLVPYP H+P
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPR--IHFP 268
Score = 47.4 bits (111), Expect = 5e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 812 RIHFPLATYAPVISAEKAYHE 874
RIHFPLATYAPVISAEKAYHE
Sbjct: 264 RIHFPLATYAPVISAEKAYHE 284
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 506 bits (1304), Expect = e-143
Identities = 248/270 (91%), Positives = 254/270 (94%)
Frame = +3
Query: 24 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 204 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLD 120
Query: 384 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
RIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQI+TA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTA 180
Query: 564 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 744 SLRFDGALNVDLTEFQTNLVPYPESISHWP 833
SLRFDGALNVDLTEFQTNLVPYP H+P
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPR--IHFP 268
Score = 47.4 bits (111), Expect = 5e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 812 RIHFPLATYAPVISAEKAYHE 874
RIHFPLATYAPVISAEKAYHE
Sbjct: 264 RIHFPLATYAPVISAEKAYHE 284
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 506 bits (1304), Expect = e-143
Identities = 249/270 (92%), Positives = 254/270 (94%)
Frame = +3
Query: 24 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
MRECISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 60
Query: 204 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 384 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
RIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA 180
Query: 564 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 744 SLRFDGALNVDLTEFQTNLVPYPESISHWP 833
SLRFDGALNVDLTEFQTNLVPYP H+P
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPR--IHFP 268
Score = 45.8 bits (107), Expect = 2e-04
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2
Query: 812 RIHFPLATYAPVISAEKAYHE 874
RIHFPL TYAPVISAEKAYHE
Sbjct: 264 RIHFPLVTYAPVISAEKAYHE 284
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 506 bits (1303), Expect = e-143
Identities = 248/270 (91%), Positives = 254/270 (94%)
Frame = +3
Query: 24 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
MRECISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 60
Query: 204 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 384 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
RIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 564 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 744 SLRFDGALNVDLTEFQTNLVPYPESISHWP 833
SLRFDGALNVDLTEFQTNLVPYP H+P
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPR--IHFP 268
Score = 45.8 bits (107), Expect = 2e-04
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2
Query: 812 RIHFPLATYAPVISAEKAYHE 874
RIHFPL TYAPVISAEKAYHE
Sbjct: 264 RIHFPLVTYAPVISAEKAYHE 284
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 505 bits (1300), Expect = e-143
Identities = 247/270 (91%), Positives = 254/270 (94%)
Frame = +3
Query: 24 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
MRECISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 204 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 384 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
R+RKL+DQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121 RVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 564 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 744 SLRFDGALNVDLTEFQTNLVPYPESISHWP 833
SLRFDGALNVDLTEFQTNLVPYP H+P
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPR--IHFP 268
Score = 45.8 bits (107), Expect = 2e-04
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2
Query: 812 RIHFPLATYAPVISAEKAYHE 874
RIHFPL TYAPVISAEKAYHE
Sbjct: 264 RIHFPLVTYAPVISAEKAYHE 284
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 504 bits (1298), Expect = e-142
Identities = 245/270 (90%), Positives = 254/270 (94%)
Frame = +3
Query: 24 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
MRECISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 204 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 384 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
RIRKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 564 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 744 SLRFDGALNVDLTEFQTNLVPYPESISHWP 833
SLRFDGALNVDLTEFQTNLVPYP H+P
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPR--IHFP 268
Score = 47.4 bits (111), Expect = 5e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 812 RIHFPLATYAPVISAEKAYHE 874
RIHFPLATYAPVISAEKAYHE
Sbjct: 264 RIHFPLATYAPVISAEKAYHE 284
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 504 bits (1297), Expect = e-142
Identities = 248/270 (91%), Positives = 253/270 (93%)
Frame = +3
Query: 24 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
MRECISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 204 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 384 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
RIRKLAD CTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 564 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 744 SLRFDGALNVDLTEFQTNLVPYPESISHWP 833
SLRFDGALNVDLTEFQTNLVPYP H+P
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPR--IHFP 268
Score = 47.4 bits (111), Expect = 5e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 812 RIHFPLATYAPVISAEKAYHE 874
RIHFPLATYAPVISAEKAYHE
Sbjct: 264 RIHFPLATYAPVISAEKAYHE 284
>sp|P02550|TBA_PIG Tubulin alpha chain
Length = 451
Score = 503 bits (1295), Expect = e-142
Identities = 244/270 (90%), Positives = 254/270 (94%)
Frame = +3
Query: 24 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
MRECISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 204 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 384 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
RIRKLADQCTGLQGF +FH LLMERLSVDYGKKSKLEF++YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 564 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 744 SLRFDGALNVDLTEFQTNLVPYPESISHWP 833
SLRFDGALNVDLTEFQTNLVPYP +H+P
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPR--AHFP 268
Score = 45.4 bits (106), Expect = 2e-04
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2
Query: 812 RIHFPLATYAPVISAEKAYHE 874
R HFPLATYAPVISAEKAYHE
Sbjct: 264 RAHFPLATYAPVISAEKAYHE 284
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
Length = 451
Score = 502 bits (1292), Expect = e-142
Identities = 244/270 (90%), Positives = 253/270 (93%)
Frame = +3
Query: 24 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
MRECISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 204 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 384 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
RIRKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 564 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 744 SLRFDGALNVDLTEFQTNLVPYPESISHWP 833
SLRFDGALNVDLTEFQTNLVPYP H+P
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPR--IHFP 268
Score = 47.4 bits (111), Expect = 5e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 812 RIHFPLATYAPVISAEKAYHE 874
RIHFPLATYAPVISAEKAYHE
Sbjct: 264 RIHFPLATYAPVISAEKAYHE 284
>sp|P08537|TBA_XENLA Tubulin alpha chain
Length = 449
Score = 502 bits (1292), Expect = e-142
Identities = 244/270 (90%), Positives = 253/270 (93%)
Frame = +3
Query: 24 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 203
MRECISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 204 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 383
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 384 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATA 563
RIRKLADQCTGLQGFL+FH LL+ERLSVDYGKKSKLEFA+YPAPQ++TA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLLERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 564 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 743
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 744 SLRFDGALNVDLTEFQTNLVPYPESISHWP 833
SLRFDGALNVDLTEFQTNLVPYP H+P
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPR--IHFP 268
Score = 47.4 bits (111), Expect = 5e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 812 RIHFPLATYAPVISAEKAYHE 874
RIHFPLATYAPVISAEKAYHE
Sbjct: 264 RIHFPLATYAPVISAEKAYHE 284
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,666,472
Number of Sequences: 369166
Number of extensions: 2022374
Number of successful extensions: 6085
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5767
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8694177530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)