Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_L24
(852 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 548 e-156
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 546 e-155
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 545 e-155
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 545 e-155
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 544 e-154
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 544 e-154
sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6) 542 e-154
sp|P08537|TBA_XENLA Tubulin alpha chain 542 e-154
sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6) 542 e-154
sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6... 542 e-154
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 548 bits (1411), Expect = e-156
Identities = 266/283 (93%), Positives = 271/283 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECISVH+GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISVHIGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDRI
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQI+TAVV
Sbjct: 123 RKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 851
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 285
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 546 bits (1408), Expect = e-155
Identities = 265/283 (93%), Positives = 271/283 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRI
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQI+TAVV
Sbjct: 123 RKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 851
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 285
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 545 bits (1404), Expect = e-155
Identities = 265/283 (93%), Positives = 270/283 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQ++TAVV
Sbjct: 123 RKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 851
RFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 285
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 545 bits (1403), Expect = e-155
Identities = 264/283 (93%), Positives = 270/283 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVV
Sbjct: 123 RKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 851
RFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQ
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQ 285
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 544 bits (1402), Expect = e-154
Identities = 262/283 (92%), Positives = 271/283 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRI
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVV
Sbjct: 123 RKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 851
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 285
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 544 bits (1401), Expect = e-154
Identities = 265/283 (93%), Positives = 270/283 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLAD CTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVV
Sbjct: 123 RKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 851
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 285
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
Length = 451
Score = 542 bits (1396), Expect = e-154
Identities = 261/283 (92%), Positives = 270/283 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRI
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVV
Sbjct: 123 RKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 851
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 285
>sp|P08537|TBA_XENLA Tubulin alpha chain
Length = 449
Score = 542 bits (1396), Expect = e-154
Identities = 261/283 (92%), Positives = 270/283 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRI
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFL+FH LL+ERLSVDYGKKSKLEFA+YPAPQ++TAVV
Sbjct: 123 RKLADQCTGLQGFLVFHSFGGGTGSGFTSLLLERLSVDYGKKSKLEFAIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 851
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 285
>sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6)
Length = 449
Score = 542 bits (1396), Expect = e-154
Identities = 261/283 (92%), Positives = 270/283 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRI
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVV
Sbjct: 123 RKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 851
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 285
>sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6) (Alpha-tubulin isotype
M-alpha-6)
sp|P68365|TBA3_CRIGR Tubulin alpha-3 chain (Alpha-tubulin 3) (Alpha-tubulin III)
Length = 449
Score = 542 bits (1396), Expect = e-154
Identities = 261/283 (92%), Positives = 270/283 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRI
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVV
Sbjct: 123 RKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 851
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 285
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,822,684
Number of Sequences: 369166
Number of extensions: 1984893
Number of successful extensions: 5851
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5529
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)