Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_J22
(804 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 506 e-143
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 505 e-143
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 505 e-143
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 504 e-143
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 504 e-142
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 504 e-142
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 503 e-142
sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6) 502 e-142
sp|P08537|TBA_XENLA Tubulin alpha chain 502 e-142
sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6) 502 e-142
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 506 bits (1303), Expect = e-143
Identities = 248/268 (92%), Positives = 252/268 (94%)
Frame = +1
Query: 1 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 180
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76
Query: 181 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 360
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQCTGLQGFL 136
Query: 361 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 540
IFH LLMERLSVDYGKKSKLEFA+YPAPQI+TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 196
Query: 541 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 720
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 721 TNLGSISRIHFPLATYAPVISAEKAYHE 804
TNL RIHFPLATYAPVISAEKAYHE
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHE 284
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 505 bits (1300), Expect = e-143
Identities = 247/268 (92%), Positives = 252/268 (94%)
Frame = +1
Query: 1 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 180
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76
Query: 181 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 360
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQCTGLQGFL 136
Query: 361 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 540
IFH LLMERLSVDYGKKSKLEFAVYPAPQI+TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLE 196
Query: 541 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 720
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 721 TNLGSISRIHFPLATYAPVISAEKAYHE 804
TNL RIHFPLATYAPVISAEKAYHE
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHE 284
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 505 bits (1300), Expect = e-143
Identities = 248/268 (92%), Positives = 251/268 (93%)
Frame = +1
Query: 1 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 180
GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76
Query: 181 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 360
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 136
Query: 361 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 540
IFH LLMERLSVDYGKKSKLEFAVYPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 541 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 720
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 721 TNLGSISRIHFPLATYAPVISAEKAYHE 804
TNL RIHFPL TYAPVISAEKAYHE
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHE 284
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 504 bits (1299), Expect = e-143
Identities = 247/268 (92%), Positives = 251/268 (93%)
Frame = +1
Query: 1 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 180
GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76
Query: 181 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 360
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 136
Query: 361 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 540
IFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 541 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 720
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 721 TNLGSISRIHFPLATYAPVISAEKAYHE 804
TNL RIHFPL TYAPVISAEKAYHE
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHE 284
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 504 bits (1298), Expect = e-142
Identities = 245/268 (91%), Positives = 252/268 (94%)
Frame = +1
Query: 1 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 180
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV+D
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVID 76
Query: 181 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 360
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136
Query: 361 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 540
+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 541 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 720
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 721 TNLGSISRIHFPLATYAPVISAEKAYHE 804
TNL RIHFPLATYAPVISAEKAYHE
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHE 284
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 504 bits (1297), Expect = e-142
Identities = 248/268 (92%), Positives = 251/268 (93%)
Frame = +1
Query: 1 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 180
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76
Query: 181 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 360
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD CTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFL 136
Query: 361 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 540
IFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 541 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 720
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 721 TNLGSISRIHFPLATYAPVISAEKAYHE 804
TNL RIHFPLATYAPVISAEKAYHE
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHE 284
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 503 bits (1296), Expect = e-142
Identities = 246/268 (91%), Positives = 251/268 (93%)
Frame = +1
Query: 1 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 180
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 76
Query: 181 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 360
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR+RKL+DQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQCTGLQGFL 136
Query: 361 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 540
IFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 541 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 720
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 721 TNLGSISRIHFPLATYAPVISAEKAYHE 804
TNL RIHFPL TYAPVISAEKAYHE
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHE 284
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
Length = 451
Score = 502 bits (1292), Expect = e-142
Identities = 244/268 (91%), Positives = 251/268 (93%)
Frame = +1
Query: 1 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 180
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV+D
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVID 76
Query: 181 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 360
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136
Query: 361 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 540
+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 541 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 720
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ 256
Query: 721 TNLGSISRIHFPLATYAPVISAEKAYHE 804
TNL RIHFPLATYAPVISAEKAYHE
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHE 284
>sp|P08537|TBA_XENLA Tubulin alpha chain
Length = 449
Score = 502 bits (1292), Expect = e-142
Identities = 244/268 (91%), Positives = 251/268 (93%)
Frame = +1
Query: 1 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 180
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV+D
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVID 76
Query: 181 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 360
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136
Query: 361 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 540
+FH LL+ERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLLERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 541 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 720
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ 256
Query: 721 TNLGSISRIHFPLATYAPVISAEKAYHE 804
TNL RIHFPLATYAPVISAEKAYHE
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHE 284
>sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6)
Length = 449
Score = 502 bits (1292), Expect = e-142
Identities = 244/268 (91%), Positives = 251/268 (93%)
Frame = +1
Query: 1 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 180
GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV+D
Sbjct: 17 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVID 76
Query: 181 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 360
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136
Query: 361 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLE 540
+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 541 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 720
HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ 256
Query: 721 TNLGSISRIHFPLATYAPVISAEKAYHE 804
TNL RIHFPLATYAPVISAEKAYHE
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHE 284
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,953,846
Number of Sequences: 369166
Number of extensions: 1849938
Number of successful extensions: 5532
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5252
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7618580670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)