Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_J24
(806 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 487 e-137
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 486 e-137
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 486 e-137
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 485 e-137
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 484 e-136
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 483 e-136
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 483 e-136
sp|P02550|TBA_PIG Tubulin alpha chain 482 e-136
sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6) 481 e-135
sp|P08537|TBA_XENLA Tubulin alpha chain 481 e-135
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 487 bits (1253), Expect = e-137
Identities = 239/260 (91%), Positives = 244/260 (93%)
Frame = +3
Query: 3 QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 182
QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL
Sbjct: 11 QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 70
Query: 183 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 362
EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDRIRKLADQCT
Sbjct: 71 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQCT 130
Query: 363 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILT 542
GLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQI+TAVVEPYNSILT
Sbjct: 131 GLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILT 190
Query: 543 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 722
THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV
Sbjct: 191 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 250
Query: 723 DLTEFQTNLVPYPESISHWP 782
DLTEFQTNLVPYP H+P
Sbjct: 251 DLTEFQTNLVPYPR--IHFP 268
Score = 34.3 bits (77), Expect = 0.41
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 761 RIHFPLATYAPVISA 805
RIHFPLATYAPVISA
Sbjct: 264 RIHFPLATYAPVISA 278
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 486 bits (1250), Expect = e-137
Identities = 238/260 (91%), Positives = 244/260 (93%)
Frame = +3
Query: 3 QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 182
QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL
Sbjct: 11 QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 70
Query: 183 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 362
EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRIRKLADQCT
Sbjct: 71 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQCT 130
Query: 363 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILT 542
GLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQI+TAVVEPYNSILT
Sbjct: 131 GLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILT 190
Query: 543 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 722
THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV
Sbjct: 191 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 250
Query: 723 DLTEFQTNLVPYPESISHWP 782
DLTEFQTNLVPYP H+P
Sbjct: 251 DLTEFQTNLVPYPR--IHFP 268
Score = 34.3 bits (77), Expect = 0.41
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 761 RIHFPLATYAPVISA 805
RIHFPLATYAPVISA
Sbjct: 264 RIHFPLATYAPVISA 278
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 486 bits (1250), Expect = e-137
Identities = 239/260 (91%), Positives = 244/260 (93%)
Frame = +3
Query: 3 QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 182
QAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPRAVFVDL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDL 70
Query: 183 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 362
EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT
Sbjct: 71 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 130
Query: 363 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILT 542
GLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQ++TAVVEPYNSILT
Sbjct: 131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILT 190
Query: 543 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 722
THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV
Sbjct: 191 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 250
Query: 723 DLTEFQTNLVPYPESISHWP 782
DLTEFQTNLVPYP H+P
Sbjct: 251 DLTEFQTNLVPYPR--IHFP 268
Score = 32.7 bits (73), Expect = 1.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 761 RIHFPLATYAPVISA 805
RIHFPL TYAPVISA
Sbjct: 264 RIHFPLVTYAPVISA 278
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 485 bits (1249), Expect = e-137
Identities = 238/260 (91%), Positives = 244/260 (93%)
Frame = +3
Query: 3 QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 182
QAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPRAVFVDL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDL 70
Query: 183 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 362
EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT
Sbjct: 71 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 130
Query: 363 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILT 542
GLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILT
Sbjct: 131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILT 190
Query: 543 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 722
THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV
Sbjct: 191 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 250
Query: 723 DLTEFQTNLVPYPESISHWP 782
DLTEFQTNLVPYP H+P
Sbjct: 251 DLTEFQTNLVPYPR--IHFP 268
Score = 32.7 bits (73), Expect = 1.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 761 RIHFPLATYAPVISA 805
RIHFPL TYAPVISA
Sbjct: 264 RIHFPLVTYAPVISA 278
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 484 bits (1246), Expect = e-136
Identities = 237/260 (91%), Positives = 244/260 (93%)
Frame = +3
Query: 3 QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 182
QAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 70
Query: 183 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 362
EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR+RKL+DQCT
Sbjct: 71 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQCT 130
Query: 363 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILT 542
GLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILT
Sbjct: 131 GLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILT 190
Query: 543 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 722
THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV
Sbjct: 191 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 250
Query: 723 DLTEFQTNLVPYPESISHWP 782
DLTEFQTNLVPYP H+P
Sbjct: 251 DLTEFQTNLVPYPR--IHFP 268
Score = 32.7 bits (73), Expect = 1.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 761 RIHFPLATYAPVISA 805
RIHFPL TYAPVISA
Sbjct: 264 RIHFPLVTYAPVISA 278
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 483 bits (1244), Expect = e-136
Identities = 235/260 (90%), Positives = 244/260 (93%)
Frame = +3
Query: 3 QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 182
QAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 70
Query: 183 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 362
EPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCT
Sbjct: 71 EPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCT 130
Query: 363 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILT 542
GLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILT
Sbjct: 131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILT 190
Query: 543 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 722
THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV
Sbjct: 191 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 250
Query: 723 DLTEFQTNLVPYPESISHWP 782
DLTEFQTNLVPYP H+P
Sbjct: 251 DLTEFQTNLVPYPR--IHFP 268
Score = 34.3 bits (77), Expect = 0.41
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 761 RIHFPLATYAPVISA 805
RIHFPLATYAPVISA
Sbjct: 264 RIHFPLATYAPVISA 278
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 483 bits (1243), Expect = e-136
Identities = 238/260 (91%), Positives = 243/260 (93%)
Frame = +3
Query: 3 QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 182
QAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 70
Query: 183 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 362
EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD CT
Sbjct: 71 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCT 130
Query: 363 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILT 542
GLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILT
Sbjct: 131 GLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILT 190
Query: 543 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 722
THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV
Sbjct: 191 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 250
Query: 723 DLTEFQTNLVPYPESISHWP 782
DLTEFQTNLVPYP H+P
Sbjct: 251 DLTEFQTNLVPYPR--IHFP 268
Score = 34.3 bits (77), Expect = 0.41
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 761 RIHFPLATYAPVISA 805
RIHFPLATYAPVISA
Sbjct: 264 RIHFPLATYAPVISA 278
>sp|P02550|TBA_PIG Tubulin alpha chain
Length = 451
Score = 482 bits (1241), Expect = e-136
Identities = 234/260 (90%), Positives = 244/260 (93%)
Frame = +3
Query: 3 QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 182
QAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 70
Query: 183 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 362
EPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCT
Sbjct: 71 EPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCT 130
Query: 363 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILT 542
GLQGF +FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILT
Sbjct: 131 GLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILT 190
Query: 543 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 722
THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV
Sbjct: 191 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 250
Query: 723 DLTEFQTNLVPYPESISHWP 782
DLTEFQTNLVPYP +H+P
Sbjct: 251 DLTEFQTNLVPYPR--AHFP 268
Score = 32.3 bits (72), Expect = 1.6
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 761 RIHFPLATYAPVISA 805
R HFPLATYAPVISA
Sbjct: 264 RAHFPLATYAPVISA 278
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
Length = 451
Score = 481 bits (1238), Expect = e-135
Identities = 234/260 (90%), Positives = 243/260 (93%)
Frame = +3
Query: 3 QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 182
QAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 70
Query: 183 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 362
EPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCT
Sbjct: 71 EPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCT 130
Query: 363 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILT 542
GLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILT
Sbjct: 131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILT 190
Query: 543 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 722
THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNV
Sbjct: 191 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNV 250
Query: 723 DLTEFQTNLVPYPESISHWP 782
DLTEFQTNLVPYP H+P
Sbjct: 251 DLTEFQTNLVPYPR--IHFP 268
Score = 34.3 bits (77), Expect = 0.41
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 761 RIHFPLATYAPVISA 805
RIHFPLATYAPVISA
Sbjct: 264 RIHFPLATYAPVISA 278
>sp|P08537|TBA_XENLA Tubulin alpha chain
Length = 449
Score = 481 bits (1238), Expect = e-135
Identities = 234/260 (90%), Positives = 243/260 (93%)
Frame = +3
Query: 3 QAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 182
QAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDL 70
Query: 183 EPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 362
EPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCT
Sbjct: 71 EPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCT 130
Query: 363 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILT 542
GLQGFL+FH LL+ERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILT
Sbjct: 131 GLQGFLVFHSFGGGTGSGFTSLLLERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILT 190
Query: 543 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 722
THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNV
Sbjct: 191 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNV 250
Query: 723 DLTEFQTNLVPYPESISHWP 782
DLTEFQTNLVPYP H+P
Sbjct: 251 DLTEFQTNLVPYPR--IHFP 268
Score = 34.3 bits (77), Expect = 0.41
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 761 RIHFPLATYAPVISA 805
RIHFPLATYAPVISA
Sbjct: 264 RIHFPLATYAPVISA 278
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,148,088
Number of Sequences: 369166
Number of extensions: 1873099
Number of successful extensions: 5665
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5350
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7666799535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)