Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_D08
(927 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 550 e-156
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 548 e-156
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 548 e-156
sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain 548 e-155
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 547 e-155
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 546 e-155
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 546 e-155
sp|P02550|TBA_PIG Tubulin alpha chain 545 e-155
sp|P02552|TBA1_CHICK Tubulin alpha-1 chain 545 e-155
sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1... 545 e-155
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 550 bits (1418), Expect = e-156
Identities = 265/269 (98%), Positives = 269/269 (100%)
Frame = +2
Query: 2 YPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 181
YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI
Sbjct: 172 YPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 231
Query: 182 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 361
GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 291
Query: 362 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGF 541
TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGF
Sbjct: 292 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 351
Query: 542 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 721
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 722 GMEEGEFSEAREDLAALEKDYEEVGIDSV 808
GMEEGEFSEAREDLAALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDLAALEKDYEEVGVDSV 440
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 548 bits (1413), Expect = e-156
Identities = 263/269 (97%), Positives = 269/269 (100%)
Frame = +2
Query: 2 YPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 181
YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI
Sbjct: 172 YPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 231
Query: 182 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 361
GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 291
Query: 362 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGF 541
TNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGF
Sbjct: 292 TNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 351
Query: 542 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 721
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 722 GMEEGEFSEAREDLAALEKDYEEVGIDSV 808
GMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGVDSV 440
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 548 bits (1413), Expect = e-156
Identities = 264/269 (98%), Positives = 269/269 (100%)
Frame = +2
Query: 2 YPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 181
YPAPQI+TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI
Sbjct: 172 YPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 231
Query: 182 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 361
GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEI
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEI 291
Query: 362 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGF 541
TNACFEPANQMVKCDPRHGKYM+CCMLYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGF
Sbjct: 292 TNACFEPANQMVKCDPRHGKYMSCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 351
Query: 542 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 721
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 722 GMEEGEFSEAREDLAALEKDYEEVGIDSV 808
GMEEGEFSEAREDLAALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDLAALEKDYEEVGVDSV 440
>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain
Length = 451
Score = 548 bits (1411), Expect = e-155
Identities = 263/269 (97%), Positives = 269/269 (100%)
Frame = +2
Query: 2 YPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 181
YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP+YTNLNRLI
Sbjct: 172 YPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLI 231
Query: 182 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 361
GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 291
Query: 362 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGF 541
TNACFEPANQ+VKCDPRHGKYMACCMLYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGF
Sbjct: 292 TNACFEPANQLVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 351
Query: 542 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 721
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 722 GMEEGEFSEAREDLAALEKDYEEVGIDSV 808
GMEEGEFSEAREDLAALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDLAALEKDYEEVGVDSV 440
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 547 bits (1409), Expect = e-155
Identities = 263/269 (97%), Positives = 267/269 (99%)
Frame = +2
Query: 2 YPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 181
YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI
Sbjct: 172 YPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 231
Query: 182 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 361
GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE LSVAEI
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEI 291
Query: 362 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGF 541
TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGF
Sbjct: 292 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 351
Query: 542 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 721
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 722 GMEEGEFSEAREDLAALEKDYEEVGIDSV 808
GMEEGEFSEAREDLAALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDLAALEKDYEEVGVDSV 440
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 546 bits (1408), Expect = e-155
Identities = 263/268 (98%), Positives = 267/268 (99%)
Frame = +2
Query: 2 YPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 181
YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI
Sbjct: 172 YPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 231
Query: 182 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 361
GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEI
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEI 291
Query: 362 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGF 541
TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGF
Sbjct: 292 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 351
Query: 542 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 721
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 722 GMEEGEFSEAREDLAALEKDYEEVGIDS 805
GMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 412 GMEEGEFSEAREDLAALEKDYEEVGMDS 439
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 546 bits (1406), Expect = e-155
Identities = 262/268 (97%), Positives = 268/268 (100%)
Frame = +2
Query: 2 YPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 181
YPAPQI+TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI
Sbjct: 172 YPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 231
Query: 182 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 361
GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+V+EI
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEI 291
Query: 362 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGF 541
TNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGF
Sbjct: 292 TNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 351
Query: 542 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 721
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 722 GMEEGEFSEAREDLAALEKDYEEVGIDS 805
GMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 412 GMEEGEFSEAREDLAALEKDYEEVGVDS 439
>sp|P02550|TBA_PIG Tubulin alpha chain
Length = 451
Score = 545 bits (1405), Expect = e-155
Identities = 261/269 (97%), Positives = 268/269 (99%)
Frame = +2
Query: 2 YPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 181
YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI
Sbjct: 172 YPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 231
Query: 182 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 361
GQIVSSITASLRFDGALNVDLTEFQTNLVPYPR HFPLATYAPVISAEKAYHEQLSVAEI
Sbjct: 232 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRAHFPLATYAPVISAEKAYHEQLSVAEI 291
Query: 362 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGF 541
TNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGF
Sbjct: 292 TNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 351
Query: 542 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 721
KVGINY+PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYEPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 722 GMEEGEFSEAREDLAALEKDYEEVGIDSV 808
GMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGVDSV 440
>sp|P02552|TBA1_CHICK Tubulin alpha-1 chain
Length = 412
Score = 545 bits (1404), Expect = e-155
Identities = 262/269 (97%), Positives = 268/269 (99%)
Frame = +2
Query: 2 YPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 181
YPA Q++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI
Sbjct: 133 YPARQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 192
Query: 182 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 361
GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI
Sbjct: 193 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 252
Query: 362 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGF 541
TNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGF
Sbjct: 253 TNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 312
Query: 542 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 721
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 313 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 372
Query: 722 GMEEGEFSEAREDLAALEKDYEEVGIDSV 808
GMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 373 GMEEGEFSEAREDMAALEKDYEEVGVDSV 401
>sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin I)
sp|P68363|TBAK_HUMAN Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
K-alpha-1)
sp|P05213|TBA2_MOUSE Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin isotype
M-alpha-2)
sp|P68360|TBA1_MERUN Tubulin alpha-1 chain (Alpha-tubulin 1)
sp|Q6P9V9|TBA2_RAT Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 451
Score = 545 bits (1403), Expect = e-155
Identities = 261/269 (97%), Positives = 268/269 (99%)
Frame = +2
Query: 2 YPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 181
YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI
Sbjct: 172 YPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI 231
Query: 182 GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 361
QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI
Sbjct: 232 SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI 291
Query: 362 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGF 541
TNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNA+IATIKTKR+IQFVDWCPTGF
Sbjct: 292 TNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGF 351
Query: 542 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 721
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 722 GMEEGEFSEAREDLAALEKDYEEVGIDSV 808
GMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGVDSV 440
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,554,660
Number of Sequences: 369166
Number of extensions: 2150862
Number of successful extensions: 6114
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5862
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9510757740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)