Planarian EST Database


Dr_sW_023_O19

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_023_O19
         (844 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P06603|TBA1_DROME  Tubulin alpha-1 chain                       540   e-153
sp|P05214|TBA3_MOUSE  Tubulin alpha-3/alpha-7 chain (Alpha-t...   539   e-153
sp|P41383|TBA2_PATVU  Tubulin alpha-2/alpha-4 chain               539   e-153
sp|P68369|TBA1_MOUSE  Tubulin alpha-1 chain (Alpha-tubulin 1...   539   e-153
sp|P52273|TBA_BOMMO  Tubulin alpha chain                          538   e-153
sp|P18258|TBA1_PARLI  Tubulin alpha-1 chain                       537   e-152
sp|P18288|TBAT_ONCMY  Tubulin alpha chain, testis-specific        537   e-152
sp|P06605|TBA3_DROME  Tubulin alpha-3 chain                       537   e-152
sp|Q8T6A5|TBA1_APLCA  Tubulin alpha-1 chain                       537   e-152
sp|P68373|TBA6_MOUSE  Tubulin alpha-6 chain (Alpha-tubulin 6...   535   e-152
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
          Length = 450

 Score =  540 bits (1392), Expect = e-153
 Identities = 265/281 (94%), Positives = 268/281 (95%)
 Frame = +1

Query: 1   RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 180
           RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH            LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKK 164

Query: 181 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 360
           SKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224

Query: 361 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 540
           TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHE 284

Query: 541 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 720
           QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344

Query: 721 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 843
           DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 385
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
           isotype M-alpha-3/7)
 sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
 sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
          Length = 450

 Score =  539 bits (1389), Expect = e-153
 Identities = 265/281 (94%), Positives = 268/281 (95%)
 Frame = +1

Query: 1   RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 180
           RGHYTIGKEIVDLVLDRIRKLAD CTGLQGFLIFH            LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKK 164

Query: 181 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 360
           SKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224

Query: 361 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 540
           TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284

Query: 541 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 720
           QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344

Query: 721 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 843
           DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 385
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
          Length = 452

 Score =  539 bits (1389), Expect = e-153
 Identities = 263/281 (93%), Positives = 269/281 (95%)
 Frame = +1

Query: 1   RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 180
           RGHYT+GKEI+DLVLDRIRKLADQCTGLQGFLIFH            LLMERLSVDYGKK
Sbjct: 105 RGHYTVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 164

Query: 181 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 360
           SKLEFA+YPAPQI+TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224

Query: 361 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 540
           TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284

Query: 541 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 720
           QL+VAEITNACFEPANQMVKCDPRHGKYM+CCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLTVAEITNACFEPANQMVKCDPRHGKYMSCCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344

Query: 721 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 843
           DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 385
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
           M-alpha-1)
 sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
 sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
 sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
          Length = 451

 Score =  539 bits (1388), Expect = e-153
 Identities = 262/281 (93%), Positives = 269/281 (95%)
 Frame = +1

Query: 1   RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 180
           RGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL+FH            LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK 164

Query: 181 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 360
           SKLEF++YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224

Query: 361 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 540
           TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284

Query: 541 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 720
           QLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFV 344

Query: 721 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 843
           DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 385
>sp|P52273|TBA_BOMMO Tubulin alpha chain
          Length = 450

 Score =  538 bits (1385), Expect = e-153
 Identities = 264/281 (93%), Positives = 267/281 (95%)
 Frame = +1

Query: 1   RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 180
           RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH            LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKK 164

Query: 181 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 360
           SKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE PTY
Sbjct: 165 SKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEPPTY 224

Query: 361 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 540
           TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHE 284

Query: 541 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 720
           QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344

Query: 721 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 843
           DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 385
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
          Length = 452

 Score =  537 bits (1383), Expect = e-152
 Identities = 261/281 (92%), Positives = 269/281 (95%)
 Frame = +1

Query: 1   RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 180
           RGHYT+GKE++D+VLDRIRKLADQCTGLQGFLIFH            LLMERLSVDYGKK
Sbjct: 105 RGHYTVGKELIDIVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKK 164

Query: 181 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 360
           SKLEFAVYPAPQI+TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224

Query: 361 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 540
           TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284

Query: 541 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 720
           QL+V+EITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLTVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFV 344

Query: 721 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 843
           DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 385
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
          Length = 450

 Score =  537 bits (1383), Expect = e-152
 Identities = 262/281 (93%), Positives = 267/281 (95%)
 Frame = +1

Query: 1   RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 180
           RGHYTIGKEIVDLVLDR+RKL+DQCTGLQGFLIFH            LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIVDLVLDRVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKK 164

Query: 181 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 360
           SKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224

Query: 361 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 540
           TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHE 284

Query: 541 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 720
            LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 MLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344

Query: 721 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 843
           DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 385
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
          Length = 450

 Score =  537 bits (1383), Expect = e-152
 Identities = 265/281 (94%), Positives = 267/281 (95%)
 Frame = +1

Query: 1   RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 180
           RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH            LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKK 164

Query: 181 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 360
           SKLEFAVYPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224

Query: 361 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 540
           TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHE 284

Query: 541 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 720
           QLSVAEITNACFEPANQMVK DPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344

Query: 721 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 843
           DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 385
>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain
          Length = 451

 Score =  537 bits (1383), Expect = e-152
 Identities = 261/281 (92%), Positives = 269/281 (95%)
 Frame = +1

Query: 1   RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 180
           RGHYT+GKE++DLVLDRIRKLADQCTGLQGFLIFH            LLMERLSVDYGKK
Sbjct: 105 RGHYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKK 164

Query: 181 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 360
           SKLEF+VYPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP+Y
Sbjct: 165 SKLEFSVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSY 224

Query: 361 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 540
           TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 225 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284

Query: 541 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 720
           QLSVAEITNACFEPANQ+VKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLSVAEITNACFEPANQLVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344

Query: 721 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 843
           DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 385
>sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6) (Alpha-tubulin isotype
           M-alpha-6)
 sp|P68365|TBA3_CRIGR Tubulin alpha-3 chain (Alpha-tubulin 3) (Alpha-tubulin III)
          Length = 449

 Score =  535 bits (1379), Expect = e-152
 Identities = 260/281 (92%), Positives = 268/281 (95%)
 Frame = +1

Query: 1   RGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 180
           RGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL+FH            LLMERLSVDYGKK
Sbjct: 105 RGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK 164

Query: 181 SKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 360
           SKLEF++YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY
Sbjct: 165 SKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY 224

Query: 361 TNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 540
           TNLNRLI QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE
Sbjct: 225 TNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE 284

Query: 541 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 720
           QL+VAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFV
Sbjct: 285 QLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFV 344

Query: 721 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 843
           DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 385
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,120,847
Number of Sequences: 369166
Number of extensions: 1933435
Number of successful extensions: 5147
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5052
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8245425915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)