Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_E07
(838 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 538 e-153
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 538 e-153
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 536 e-152
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 536 e-152
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 535 e-152
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 535 e-152
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 535 e-152
sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6) 533 e-151
sp|P08537|TBA_XENLA Tubulin alpha chain 533 e-151
sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6) 533 e-151
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 538 bits (1386), Expect = e-153
Identities = 261/279 (93%), Positives = 267/279 (95%)
Frame = +1
Query: 1 ISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 180
IS+H+GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR
Sbjct: 5 ISVHIGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 64
Query: 181 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 360
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDRIRK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRK 124
Query: 361 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 540
LADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQI+TAVVEP
Sbjct: 125 LADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEP 184
Query: 541 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 720
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 721 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 837
DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 283
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 538 bits (1385), Expect = e-153
Identities = 262/279 (93%), Positives = 267/279 (95%)
Frame = +1
Query: 1 ISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 180
ISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR
Sbjct: 5 ISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 64
Query: 181 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 360
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRIRK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRK 124
Query: 361 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 540
LADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQI+TAVVEP
Sbjct: 125 LADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEP 184
Query: 541 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 720
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 721 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 837
DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 283
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 536 bits (1381), Expect = e-152
Identities = 262/279 (93%), Positives = 266/279 (95%)
Frame = +1
Query: 1 ISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 180
ISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPR 64
Query: 181 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 360
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 124
Query: 361 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 540
LADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQ++TAVVEP
Sbjct: 125 LADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEP 184
Query: 541 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 720
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 721 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 837
DGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 283
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 536 bits (1380), Expect = e-152
Identities = 261/279 (93%), Positives = 266/279 (95%)
Frame = +1
Query: 1 ISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 180
ISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPR 64
Query: 181 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 360
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 124
Query: 361 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 540
LADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEP
Sbjct: 125 LADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 184
Query: 541 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 720
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 721 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 837
DGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 283
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 535 bits (1379), Expect = e-152
Identities = 259/279 (92%), Positives = 267/279 (95%)
Frame = +1
Query: 1 ISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 180
ISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 64
Query: 181 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 360
AVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRK 124
Query: 361 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 540
LADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEP
Sbjct: 125 LADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP 184
Query: 541 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 720
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 721 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 837
DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 283
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 535 bits (1378), Expect = e-152
Identities = 262/279 (93%), Positives = 266/279 (95%)
Frame = +1
Query: 1 ISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 180
ISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 64
Query: 181 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 360
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 124
Query: 361 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 540
LAD CTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEP
Sbjct: 125 LADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 184
Query: 541 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 720
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 721 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 837
DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 283
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 535 bits (1377), Expect = e-152
Identities = 260/279 (93%), Positives = 266/279 (95%)
Frame = +1
Query: 1 ISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 180
ISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 64
Query: 181 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 360
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR+RK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRK 124
Query: 361 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 540
L+DQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEP
Sbjct: 125 LSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 184
Query: 541 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 720
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 721 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 837
DGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYH
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH 283
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
Length = 451
Score = 533 bits (1373), Expect = e-151
Identities = 258/279 (92%), Positives = 266/279 (95%)
Frame = +1
Query: 1 ISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 180
ISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 64
Query: 181 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 360
AVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRK 124
Query: 361 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 540
LADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEP
Sbjct: 125 LADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP 184
Query: 541 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 720
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRF 244
Query: 721 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 837
DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 283
>sp|P08537|TBA_XENLA Tubulin alpha chain
Length = 449
Score = 533 bits (1373), Expect = e-151
Identities = 258/279 (92%), Positives = 266/279 (95%)
Frame = +1
Query: 1 ISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 180
ISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 64
Query: 181 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 360
AVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRK 124
Query: 361 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 540
LADQCTGLQGFL+FH LL+ERLSVDYGKKSKLEFA+YPAPQ++TAVVEP
Sbjct: 125 LADQCTGLQGFLVFHSFGGGTGSGFTSLLLERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 184
Query: 541 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 720
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRF 244
Query: 721 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 837
DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 283
>sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6)
Length = 449
Score = 533 bits (1373), Expect = e-151
Identities = 258/279 (92%), Positives = 266/279 (95%)
Frame = +1
Query: 1 ISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 180
ISIHVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR
Sbjct: 5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPR 64
Query: 181 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 360
AVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRK 124
Query: 361 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 540
LADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEP
Sbjct: 125 LADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP 184
Query: 541 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 720
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRF 244
Query: 721 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 837
DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH 283
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,685,035
Number of Sequences: 369166
Number of extensions: 1816575
Number of successful extensions: 5558
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5245
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8148988185
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)