Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_004_G13
(872 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 558 e-159
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 556 e-158
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 556 e-158
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 556 e-158
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 556 e-158
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 555 e-158
sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1... 553 e-157
sp|Q5R1W4|TBAK_PANTR Tubulin alpha-ubiquitous chain (Alpha-... 553 e-157
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 553 e-157
sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6) 552 e-157
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 558 bits (1438), Expect = e-159
Identities = 272/290 (93%), Positives = 278/290 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECISVH+GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISVHIGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDRI
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQI+TAVV
Sbjct: 123 RKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 872
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEIT
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 292
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 556 bits (1434), Expect = e-158
Identities = 272/290 (93%), Positives = 277/290 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQ++TAVV
Sbjct: 123 RKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 872
RFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEIT
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 292
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 556 bits (1433), Expect = e-158
Identities = 271/290 (93%), Positives = 277/290 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVV
Sbjct: 123 RKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 872
RFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEIT
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 292
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 556 bits (1432), Expect = e-158
Identities = 270/290 (93%), Positives = 278/290 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRI
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQI+TAVV
Sbjct: 123 RKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 872
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+V+EIT
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEIT 292
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 556 bits (1432), Expect = e-158
Identities = 269/290 (92%), Positives = 278/290 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRI
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVV
Sbjct: 123 RKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 872
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 292
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 555 bits (1431), Expect = e-158
Identities = 272/290 (93%), Positives = 277/290 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLAD CTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVV
Sbjct: 123 RKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 872
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 292
>sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin I)
sp|P68363|TBAK_HUMAN Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
K-alpha-1)
sp|P05213|TBA2_MOUSE Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin isotype
M-alpha-2)
sp|P68360|TBA1_MERUN Tubulin alpha-1 chain (Alpha-tubulin 1)
sp|Q6P9V9|TBA2_RAT Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 451
Score = 553 bits (1426), Expect = e-157
Identities = 268/290 (92%), Positives = 277/290 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRI
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVV
Sbjct: 123 RKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 872
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 292
>sp|Q5R1W4|TBAK_PANTR Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
K-alpha-1)
Length = 451
Score = 553 bits (1426), Expect = e-157
Identities = 268/290 (92%), Positives = 277/290 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRI
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVV
Sbjct: 123 RKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 872
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 292
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 553 bits (1425), Expect = e-157
Identities = 269/290 (92%), Positives = 276/290 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR+
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRV 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKL+DQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVV
Sbjct: 123 RKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 872
RFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE LSVAEIT
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEIT 292
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
Length = 451
Score = 552 bits (1423), Expect = e-157
Identities = 267/290 (92%), Positives = 277/290 (95%)
Frame = +3
Query: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 182
ECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 183 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 362
PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRI
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRI 122
Query: 363 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVV 542
RKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVV
Sbjct: 123 RKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 182
Query: 543 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 722
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASL
Sbjct: 183 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASL 242
Query: 723 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 872
RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSV+EIT
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEIT 292
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,875,708
Number of Sequences: 369166
Number of extensions: 2050649
Number of successful extensions: 6087
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5765
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8646143400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)