Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_B17
(878 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 544 e-154
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 543 e-154
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 543 e-154
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 543 e-154
sp|P52273|TBA_BOMMO Tubulin alpha chain 541 e-154
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 541 e-153
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 541 e-153
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 541 e-153
sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain 541 e-153
sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6) 539 e-153
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 544 bits (1402), Expect = e-154
Identities = 266/283 (93%), Positives = 270/283 (95%)
Frame = +1
Query: 1 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 180
EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH
Sbjct: 90 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGF 149
Query: 181 XXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 360
LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAI
Sbjct: 150 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 209
Query: 361 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 540
YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 210 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 541 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 720
TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN
Sbjct: 270 VTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 329
Query: 721 ASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 849
A+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ
Sbjct: 330 AAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 543 bits (1399), Expect = e-154
Identities = 266/283 (93%), Positives = 270/283 (95%)
Frame = +1
Query: 1 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 180
EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD CTGLQGFLIFH
Sbjct: 90 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGF 149
Query: 181 XXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 360
LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAI
Sbjct: 150 ASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 209
Query: 361 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 540
YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 210 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 541 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 720
ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN
Sbjct: 270 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 329
Query: 721 ASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 849
A+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ
Sbjct: 330 AAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 543 bits (1399), Expect = e-154
Identities = 264/283 (93%), Positives = 271/283 (95%)
Frame = +1
Query: 1 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 180
EQLITGKEDAANNYARGHYT+GKEI+DLVLDRIRKLADQCTGLQGFLIFH
Sbjct: 90 EQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGF 149
Query: 181 XXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 360
LLMERLSVDYGKKSKLEFA+YPAPQI+TAVVEPYNSILTTHTTLEHSDCAFMVDNEAI
Sbjct: 150 SSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 209
Query: 361 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 540
YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 210 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 541 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 720
ATYAPVISAEKAYHEQL+VAEITNACFEPANQMVKCDPRHGKYM+CCMLYRGDVVPKDVN
Sbjct: 270 ATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMSCCMLYRGDVVPKDVN 329
Query: 721 ASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 849
A+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ
Sbjct: 330 AAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 543 bits (1398), Expect = e-154
Identities = 263/283 (92%), Positives = 271/283 (95%)
Frame = +1
Query: 1 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 180
EQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL+FH
Sbjct: 90 EQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGF 149
Query: 181 XXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 360
LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAI
Sbjct: 150 TSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 209
Query: 361 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 540
YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 210 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 541 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 720
ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN
Sbjct: 270 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 329
Query: 721 ASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 849
A+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ
Sbjct: 330 AAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
>sp|P52273|TBA_BOMMO Tubulin alpha chain
Length = 450
Score = 541 bits (1395), Expect = e-154
Identities = 265/283 (93%), Positives = 269/283 (95%)
Frame = +1
Query: 1 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 180
EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH
Sbjct: 90 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGF 149
Query: 181 XXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 360
LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAI
Sbjct: 150 TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 209
Query: 361 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 540
YDICRRNLDIE PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 210 YDICRRNLDIEPPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 541 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 720
TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN
Sbjct: 270 VTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 329
Query: 721 ASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 849
A+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ
Sbjct: 330 AAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 541 bits (1393), Expect = e-153
Identities = 262/283 (92%), Positives = 271/283 (95%)
Frame = +1
Query: 1 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 180
EQLITGKEDAANNYARGHYT+GKE++D+VLDRIRKLADQCTGLQGFLIFH
Sbjct: 90 EQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGF 149
Query: 181 XXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 360
LLMERLSVDYGKKSKLEFAVYPAPQI+TAVVEPYNSILTTHTTLEHSDCAFMVDNEAI
Sbjct: 150 SSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 209
Query: 361 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 540
YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 210 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 541 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 720
ATYAPVISAEKAYHEQL+V+EITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN
Sbjct: 270 ATYAPVISAEKAYHEQLTVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 329
Query: 721 ASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 849
A+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ
Sbjct: 330 AAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 541 bits (1393), Expect = e-153
Identities = 263/283 (92%), Positives = 269/283 (95%)
Frame = +1
Query: 1 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 180
EQLITGKEDAANNYARGHYTIGKEIVDLVLDR+RKL+DQCTGLQGFLIFH
Sbjct: 90 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQCTGLQGFLIFHSFGGGTGSGF 149
Query: 181 XXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 360
LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAI
Sbjct: 150 ASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 209
Query: 361 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 540
YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 210 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 541 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 720
TYAPVISAEKAYHE LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN
Sbjct: 270 VTYAPVISAEKAYHEMLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 329
Query: 721 ASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 849
A+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ
Sbjct: 330 AAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 541 bits (1393), Expect = e-153
Identities = 266/283 (93%), Positives = 269/283 (95%)
Frame = +1
Query: 1 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 180
EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH
Sbjct: 90 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGF 149
Query: 181 XXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 360
LLMERLSVDYGKKSKLEFAVYPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAI
Sbjct: 150 TSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 209
Query: 361 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 540
YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 210 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 541 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 720
TYAPVISAEKAYHEQLSVAEITNACFEPANQMVK DPRHGKYMACCMLYRGDVVPKDVN
Sbjct: 270 VTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPKDVN 329
Query: 721 ASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 849
A+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ
Sbjct: 330 AAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain
Length = 451
Score = 541 bits (1393), Expect = e-153
Identities = 262/283 (92%), Positives = 271/283 (95%)
Frame = +1
Query: 1 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 180
EQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQGFLIFH
Sbjct: 90 EQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGF 149
Query: 181 XXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 360
LLMERLSVDYGKKSKLEF+VYPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAI
Sbjct: 150 TSLLMERLSVDYGKKSKLEFSVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 209
Query: 361 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 540
YDICRRNLDIERP+YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 210 YDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 541 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 720
ATYAPVISAEKAYHEQLSVAEITNACFEPANQ+VKCDPRHGKYMACCMLYRGDVVPKDVN
Sbjct: 270 ATYAPVISAEKAYHEQLSVAEITNACFEPANQLVKCDPRHGKYMACCMLYRGDVVPKDVN 329
Query: 721 ASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 849
A+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ
Sbjct: 330 AAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
>sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6)
Length = 449
Score = 539 bits (1389), Expect = e-153
Identities = 261/283 (92%), Positives = 270/283 (95%)
Frame = +1
Query: 1 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 180
EQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQCTGLQGFL+FH
Sbjct: 90 EQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGF 149
Query: 181 XXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 360
LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAI
Sbjct: 150 TSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 209
Query: 361 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 540
YDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL
Sbjct: 210 YDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 541 ATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVN 720
ATYAPVISAEKAYHEQL+VAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN
Sbjct: 270 ATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN 329
Query: 721 ASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 849
A+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ
Sbjct: 330 AAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,505,385
Number of Sequences: 369166
Number of extensions: 2084563
Number of successful extensions: 5482
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5392
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8742211660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)