Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_C08
(821 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 520 e-147
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 519 e-147
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 519 e-147
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 518 e-147
sp|P52273|TBA_BOMMO Tubulin alpha chain 517 e-146
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 516 e-146
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 516 e-146
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 516 e-146
sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6) 514 e-146
sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6... 514 e-146
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 520 bits (1339), Expect = e-147
Identities = 256/273 (93%), Positives = 260/273 (95%)
Frame = +2
Query: 2 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 181
VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 127
Query: 182 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNS 361
QCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNS
Sbjct: 128 QCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 187
Query: 362 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 541
ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA
Sbjct: 188 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 247
Query: 542 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 721
LNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP
Sbjct: 248 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 307
Query: 722 RHGKYMACCMLYRGDVVPKDVNASIATIKTKRT 820
RHGKYMACCMLYRGDVVPKDVNA+IATIKTKRT
Sbjct: 308 RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT 340
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 519 bits (1336), Expect = e-147
Identities = 256/273 (93%), Positives = 260/273 (95%)
Frame = +2
Query: 2 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 181
VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 127
Query: 182 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNS 361
CTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNS
Sbjct: 128 LCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 187
Query: 362 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 541
ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA
Sbjct: 188 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 247
Query: 542 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 721
LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP
Sbjct: 248 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 307
Query: 722 RHGKYMACCMLYRGDVVPKDVNASIATIKTKRT 820
RHGKYMACCMLYRGDVVPKDVNA+IATIKTKRT
Sbjct: 308 RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT 340
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 519 bits (1336), Expect = e-147
Identities = 254/273 (93%), Positives = 261/273 (95%)
Frame = +2
Query: 2 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 181
VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDRIRKLAD
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLAD 127
Query: 182 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNS 361
QCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQI+TAVVEPYNS
Sbjct: 128 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNS 187
Query: 362 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 541
ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA
Sbjct: 188 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 247
Query: 542 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 721
LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPANQMVKCDP
Sbjct: 248 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDP 307
Query: 722 RHGKYMACCMLYRGDVVPKDVNASIATIKTKRT 820
RHGKYM+CCMLYRGDVVPKDVNA+IATIKTKRT
Sbjct: 308 RHGKYMSCCMLYRGDVVPKDVNAAIATIKTKRT 340
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 518 bits (1334), Expect = e-147
Identities = 252/273 (92%), Positives = 261/273 (95%)
Frame = +2
Query: 2 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 181
VDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLAD 127
Query: 182 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNS 361
QCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNS
Sbjct: 128 QCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 187
Query: 362 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 541
ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA
Sbjct: 188 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 247
Query: 542 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 721
LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP
Sbjct: 248 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 307
Query: 722 RHGKYMACCMLYRGDVVPKDVNASIATIKTKRT 820
RHGKYMACC+LYRGDVVPKDVNA+IATIKTKRT
Sbjct: 308 RHGKYMACCLLYRGDVVPKDVNAAIATIKTKRT 340
>sp|P52273|TBA_BOMMO Tubulin alpha chain
Length = 450
Score = 517 bits (1332), Expect = e-146
Identities = 255/273 (93%), Positives = 259/273 (94%)
Frame = +2
Query: 2 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 181
VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 127
Query: 182 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNS 361
QCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNS
Sbjct: 128 QCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 187
Query: 362 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 541
ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE PTYTNLNRLIGQIVSSITASLRFDGA
Sbjct: 188 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEPPTYTNLNRLIGQIVSSITASLRFDGA 247
Query: 542 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 721
LNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP
Sbjct: 248 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 307
Query: 722 RHGKYMACCMLYRGDVVPKDVNASIATIKTKRT 820
RHGKYMACCMLYRGDVVPKDVNA+IATIKTKRT
Sbjct: 308 RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT 340
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 516 bits (1330), Expect = e-146
Identities = 252/273 (92%), Positives = 261/273 (95%)
Frame = +2
Query: 2 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 181
VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRIRKLAD
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLAD 127
Query: 182 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNS 361
QCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQI+TAVVEPYNS
Sbjct: 128 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNS 187
Query: 362 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 541
ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA
Sbjct: 188 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 247
Query: 542 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 721
LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+V+EITNACFEPANQMVKCDP
Sbjct: 248 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPANQMVKCDP 307
Query: 722 RHGKYMACCMLYRGDVVPKDVNASIATIKTKRT 820
RHGKYMACC+LYRGDVVPKDVNA+IATIKTKRT
Sbjct: 308 RHGKYMACCLLYRGDVVPKDVNAAIATIKTKRT 340
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 516 bits (1330), Expect = e-146
Identities = 253/273 (92%), Positives = 259/273 (94%)
Frame = +2
Query: 2 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 181
VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR+RKL+D
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSD 127
Query: 182 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNS 361
QCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNS
Sbjct: 128 QCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 187
Query: 362 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 541
ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA
Sbjct: 188 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 247
Query: 542 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 721
LNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE LSVAEITNACFEPANQMVKCDP
Sbjct: 248 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPANQMVKCDP 307
Query: 722 RHGKYMACCMLYRGDVVPKDVNASIATIKTKRT 820
RHGKYMACCMLYRGDVVPKDVNA+IATIKTKRT
Sbjct: 308 RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT 340
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 516 bits (1330), Expect = e-146
Identities = 256/273 (93%), Positives = 259/273 (94%)
Frame = +2
Query: 2 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 181
VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 127
Query: 182 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNS 361
QCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQ++TAVVEPYNS
Sbjct: 128 QCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNS 187
Query: 362 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 541
ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA
Sbjct: 188 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 247
Query: 542 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 721
LNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPANQMVK DP
Sbjct: 248 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDP 307
Query: 722 RHGKYMACCMLYRGDVVPKDVNASIATIKTKRT 820
RHGKYMACCMLYRGDVVPKDVNA+IATIKTKRT
Sbjct: 308 RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT 340
>sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6)
Length = 449
Score = 514 bits (1325), Expect = e-146
Identities = 250/273 (91%), Positives = 260/273 (95%)
Frame = +2
Query: 2 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 181
VDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLAD 127
Query: 182 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNS 361
QCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNS
Sbjct: 128 QCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 187
Query: 362 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 541
ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGA
Sbjct: 188 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGA 247
Query: 542 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 721
LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPANQMVKCDP
Sbjct: 248 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDP 307
Query: 722 RHGKYMACCMLYRGDVVPKDVNASIATIKTKRT 820
RHGKYMACC+LYRGDVVPKDVNA+IATIKTKRT
Sbjct: 308 RHGKYMACCLLYRGDVVPKDVNAAIATIKTKRT 340
>sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6) (Alpha-tubulin isotype
M-alpha-6)
sp|P68365|TBA3_CRIGR Tubulin alpha-3 chain (Alpha-tubulin 3) (Alpha-tubulin III)
Length = 449
Score = 514 bits (1325), Expect = e-146
Identities = 250/273 (91%), Positives = 260/273 (95%)
Frame = +2
Query: 2 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 181
VDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLAD 127
Query: 182 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNS 361
QCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNS
Sbjct: 128 QCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 187
Query: 362 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 541
ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGA
Sbjct: 188 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGA 247
Query: 542 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 721
LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPANQMVKCDP
Sbjct: 248 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDP 307
Query: 722 RHGKYMACCMLYRGDVVPKDVNASIATIKTKRT 820
RHGKYMACC+LYRGDVVPKDVNA+IATIKTKRT
Sbjct: 308 RHGKYMACCLLYRGDVVPKDVNAAIATIKTKRT 340
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,410,995
Number of Sequences: 369166
Number of extensions: 1745987
Number of successful extensions: 4738
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4623
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7907893860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)