Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_E17
(941 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 605 e-173
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 604 e-172
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 604 e-172
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 603 e-172
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 602 e-172
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 602 e-172
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 602 e-172
sp|P52273|TBA_BOMMO Tubulin alpha chain 601 e-172
sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6) 600 e-171
sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6... 600 e-171
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 605 bits (1560), Expect = e-173
Identities = 296/313 (94%), Positives = 300/313 (95%)
Frame = +2
Query: 2 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 181
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 124
Query: 182 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 361
LADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEP
Sbjct: 125 LADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 184
Query: 362 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 541
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 542 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 721
DGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPANQMVK
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 304
Query: 722 CDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 901
CDPRHGKYMACCMLYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP
Sbjct: 305 CDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 364
Query: 902 GGDLAKVQRAVCM 940
GGDLAKVQRAVCM
Sbjct: 365 GGDLAKVQRAVCM 377
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 604 bits (1557), Expect = e-172
Identities = 296/313 (94%), Positives = 300/313 (95%)
Frame = +2
Query: 2 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 181
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 124
Query: 182 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 361
LAD CTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEP
Sbjct: 125 LADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 184
Query: 362 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 541
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 542 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 721
DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 304
Query: 722 CDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 901
CDPRHGKYMACCMLYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP
Sbjct: 305 CDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 364
Query: 902 GGDLAKVQRAVCM 940
GGDLAKVQRAVCM
Sbjct: 365 GGDLAKVQRAVCM 377
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 604 bits (1557), Expect = e-172
Identities = 294/313 (93%), Positives = 301/313 (96%)
Frame = +2
Query: 2 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 181
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDRIRK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRK 124
Query: 182 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 361
LADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQI+TAVVEP
Sbjct: 125 LADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEP 184
Query: 362 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 541
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 542 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 721
DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPANQMVK
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVK 304
Query: 722 CDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 901
CDPRHGKYM+CCMLYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP
Sbjct: 305 CDPRHGKYMSCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 364
Query: 902 GGDLAKVQRAVCM 940
GGDLAKVQRAVCM
Sbjct: 365 GGDLAKVQRAVCM 377
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 603 bits (1555), Expect = e-172
Identities = 292/313 (93%), Positives = 301/313 (96%)
Frame = +2
Query: 2 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 181
AVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRK 124
Query: 182 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 361
LADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEP
Sbjct: 125 LADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP 184
Query: 362 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 541
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 542 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 721
DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 304
Query: 722 CDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 901
CDPRHGKYMACC+LYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP
Sbjct: 305 CDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 364
Query: 902 GGDLAKVQRAVCM 940
GGDLAKVQRAVCM
Sbjct: 365 GGDLAKVQRAVCM 377
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 602 bits (1551), Expect = e-172
Identities = 292/313 (93%), Positives = 301/313 (96%)
Frame = +2
Query: 2 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 181
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRIRK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRK 124
Query: 182 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 361
LADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQI+TAVVEP
Sbjct: 125 LADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEP 184
Query: 362 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 541
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 542 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 721
DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+V+EITNACFEPANQMVK
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPANQMVK 304
Query: 722 CDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 901
CDPRHGKYMACC+LYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP
Sbjct: 305 CDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 364
Query: 902 GGDLAKVQRAVCM 940
GGDLAKVQRAVCM
Sbjct: 365 GGDLAKVQRAVCM 377
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 602 bits (1551), Expect = e-172
Identities = 293/313 (93%), Positives = 299/313 (95%)
Frame = +2
Query: 2 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 181
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR+RK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRK 124
Query: 182 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 361
L+DQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEP
Sbjct: 125 LSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 184
Query: 362 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 541
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 542 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 721
DGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE LSVAEITNACFEPANQMVK
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPANQMVK 304
Query: 722 CDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 901
CDPRHGKYMACCMLYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP
Sbjct: 305 CDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 364
Query: 902 GGDLAKVQRAVCM 940
GGDLAKVQRAVCM
Sbjct: 365 GGDLAKVQRAVCM 377
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 602 bits (1551), Expect = e-172
Identities = 296/313 (94%), Positives = 299/313 (95%)
Frame = +2
Query: 2 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 181
AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK
Sbjct: 65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 124
Query: 182 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 361
LADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQ++TAVVEP
Sbjct: 125 LADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEP 184
Query: 362 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 541
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 244
Query: 542 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 721
DGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPANQMVK
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 304
Query: 722 CDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 901
DPRHGKYMACCMLYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP
Sbjct: 305 VDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 364
Query: 902 GGDLAKVQRAVCM 940
GGDLAKVQRAVCM
Sbjct: 365 GGDLAKVQRAVCM 377
>sp|P52273|TBA_BOMMO Tubulin alpha chain
Length = 450
Score = 601 bits (1550), Expect = e-172
Identities = 294/313 (93%), Positives = 299/313 (95%)
Frame = +2
Query: 2 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 181
A+FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK
Sbjct: 65 ALFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 124
Query: 182 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 361
LADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEP
Sbjct: 125 LADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 184
Query: 362 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 541
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE PTYTNLNRLIGQIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEPPTYTNLNRLIGQIVSSITASLRF 244
Query: 542 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 721
DGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPANQMVK
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 304
Query: 722 CDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 901
CDPRHGKYMACCMLYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP
Sbjct: 305 CDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 364
Query: 902 GGDLAKVQRAVCM 940
GGDLAKVQRAVCM
Sbjct: 365 GGDLAKVQRAVCM 377
>sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6)
Length = 449
Score = 600 bits (1546), Expect = e-171
Identities = 290/313 (92%), Positives = 300/313 (95%)
Frame = +2
Query: 2 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 181
AVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRK 124
Query: 182 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 361
LADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEP
Sbjct: 125 LADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP 184
Query: 362 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 541
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRF 244
Query: 542 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 721
DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPANQMVK
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVK 304
Query: 722 CDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 901
CDPRHGKYMACC+LYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP
Sbjct: 305 CDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 364
Query: 902 GGDLAKVQRAVCM 940
GGDLAKVQRAVCM
Sbjct: 365 GGDLAKVQRAVCM 377
>sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6) (Alpha-tubulin isotype
M-alpha-6)
sp|P68365|TBA3_CRIGR Tubulin alpha-3 chain (Alpha-tubulin 3) (Alpha-tubulin III)
Length = 449
Score = 600 bits (1546), Expect = e-171
Identities = 290/313 (92%), Positives = 300/313 (95%)
Frame = +2
Query: 2 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 181
AVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRK 124
Query: 182 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEP 361
LADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEP
Sbjct: 125 LADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP 184
Query: 362 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRF 541
YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRF 244
Query: 542 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 721
DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPANQMVK
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVK 304
Query: 722 CDPRHGKYMACCMLYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 901
CDPRHGKYMACC+LYRGDVVPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP
Sbjct: 305 CDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 364
Query: 902 GGDLAKVQRAVCM 940
GGDLAKVQRAVCM
Sbjct: 365 GGDLAKVQRAVCM 377
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,236,033
Number of Sequences: 369166
Number of extensions: 2076232
Number of successful extensions: 5492
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5367
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9750928390
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)