Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_G03
(902 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 583 e-166
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 581 e-165
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 580 e-165
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 580 e-165
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 580 e-165
sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1... 578 e-165
sp|Q5R1W4|TBAK_PANTR Tubulin alpha-ubiquitous chain (Alpha-... 578 e-165
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 578 e-165
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 577 e-164
sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6) 577 e-164
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 583 bits (1502), Expect = e-166
Identities = 283/300 (94%), Positives = 288/300 (96%)
Frame = +1
Query: 1 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 180
GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD
Sbjct: 10 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 181 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 360
LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDRIRKLADQC
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQC 129
Query: 361 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 540
TGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQI+TAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSIL 189
Query: 541 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 720
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 721 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 900
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRH 309
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 581 bits (1497), Expect = e-165
Identities = 282/300 (94%), Positives = 287/300 (95%)
Frame = +1
Query: 1 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 180
GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPRAVFVD
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 181 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 360
LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129
Query: 361 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 540
TGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 189
Query: 541 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 720
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 721 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 900
VDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 309
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 580 bits (1496), Expect = e-165
Identities = 281/300 (93%), Positives = 288/300 (96%)
Frame = +1
Query: 1 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 180
GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD
Sbjct: 10 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 181 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 360
LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRIRKLADQC
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQC 129
Query: 361 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 540
TGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQI+TAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSIL 189
Query: 541 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 720
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 721 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 900
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+V+EITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPANQMVKCDPRH 309
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 580 bits (1496), Expect = e-165
Identities = 280/300 (93%), Positives = 288/300 (96%)
Frame = +1
Query: 1 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 180
GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 181 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 360
LEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQC
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQC 129
Query: 361 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 540
TGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 189
Query: 541 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 720
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 721 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 900
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 309
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 580 bits (1495), Expect = e-165
Identities = 283/300 (94%), Positives = 287/300 (95%)
Frame = +1
Query: 1 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 180
GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 181 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 360
LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD C
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLC 129
Query: 361 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 540
TGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 189
Query: 541 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 720
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 721 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 900
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 309
>sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin I)
sp|P68363|TBAK_HUMAN Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
K-alpha-1)
sp|P05213|TBA2_MOUSE Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin isotype
M-alpha-2)
sp|P68360|TBA1_MERUN Tubulin alpha-1 chain (Alpha-tubulin 1)
sp|Q6P9V9|TBA2_RAT Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 451
Score = 578 bits (1490), Expect = e-165
Identities = 279/300 (93%), Positives = 287/300 (95%)
Frame = +1
Query: 1 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 180
GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 181 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 360
LEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQC
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQC 129
Query: 361 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 540
TGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 189
Query: 541 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 720
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
Query: 721 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 900
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 309
>sp|Q5R1W4|TBAK_PANTR Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
K-alpha-1)
Length = 451
Score = 578 bits (1490), Expect = e-165
Identities = 279/300 (93%), Positives = 287/300 (95%)
Frame = +1
Query: 1 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 180
GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 181 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 360
LEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQC
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQC 129
Query: 361 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 540
TGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 189
Query: 541 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 720
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
Query: 721 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 900
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 309
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 578 bits (1489), Expect = e-165
Identities = 280/300 (93%), Positives = 286/300 (95%)
Frame = +1
Query: 1 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 180
GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 181 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 360
LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR+RKL+DQC
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQC 129
Query: 361 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 540
TGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 189
Query: 541 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 720
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 721 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 900
VDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE LSVAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPANQMVKCDPRH 309
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 577 bits (1488), Expect = e-164
Identities = 282/300 (94%), Positives = 286/300 (95%)
Frame = +1
Query: 1 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 180
GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAGKHVPRAVFVD
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 181 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 360
LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129
Query: 361 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 540
TGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSIL 189
Query: 541 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 720
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 721 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 900
VDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPANQMVK DPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRH 309
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
Length = 451
Score = 577 bits (1487), Expect = e-164
Identities = 278/300 (92%), Positives = 287/300 (95%)
Frame = +1
Query: 1 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 180
GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 69
Query: 181 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 360
LEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLDRIRKLADQC
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQC 129
Query: 361 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSIL 540
TGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSIL
Sbjct: 130 TGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 189
Query: 541 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 720
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
Query: 721 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 900
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSV+EITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRH 309
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,019,993
Number of Sequences: 369166
Number of extensions: 2156188
Number of successful extensions: 6301
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5975
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9126484700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)