Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_M24
(843 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 484 e-137
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 483 e-136
sp|P02552|TBA1_CHICK Tubulin alpha-1 chain 483 e-136
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 482 e-136
sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain 482 e-136
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 481 e-135
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 481 e-135
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 479 e-135
sp|P02550|TBA_PIG Tubulin alpha chain 479 e-135
sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1... 479 e-135
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 484 bits (1247), Expect = e-137
Identities = 234/237 (98%), Positives = 237/237 (100%)
Frame = +1
Query: 49 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 228
VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP
Sbjct: 204 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 263
Query: 229 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 408
RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV
Sbjct: 264 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 323
Query: 409 VPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVRRAVCMLSNTTA 588
VPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV+RAVCMLSNTTA
Sbjct: 324 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA 383
Query: 589 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIDSV 759
IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DSV
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 440
Score = 36.6 bits (83), Expect = 0.089
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFM 47
LTTHTTLEHSDCAFM
Sbjct: 189 LTTHTTLEHSDCAFM 203
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 483 bits (1242), Expect = e-136
Identities = 232/237 (97%), Positives = 237/237 (100%)
Frame = +1
Query: 49 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 228
VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP
Sbjct: 204 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 263
Query: 229 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 408
RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDV
Sbjct: 264 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDV 323
Query: 409 VPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVRRAVCMLSNTTA 588
VPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV+RAVCMLSNTTA
Sbjct: 324 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA 383
Query: 589 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIDSV 759
IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSV 440
Score = 36.6 bits (83), Expect = 0.089
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFM 47
LTTHTTLEHSDCAFM
Sbjct: 189 LTTHTTLEHSDCAFM 203
>sp|P02552|TBA1_CHICK Tubulin alpha-1 chain
Length = 412
Score = 483 bits (1242), Expect = e-136
Identities = 232/237 (97%), Positives = 237/237 (100%)
Frame = +1
Query: 49 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 228
VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP
Sbjct: 165 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 224
Query: 229 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 408
RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDV
Sbjct: 225 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDV 284
Query: 409 VPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVRRAVCMLSNTTA 588
VPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV+RAVCMLSNTTA
Sbjct: 285 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA 344
Query: 589 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIDSV 759
IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 345 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSV 401
Score = 36.6 bits (83), Expect = 0.089
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFM 47
LTTHTTLEHSDCAFM
Sbjct: 150 LTTHTTLEHSDCAFM 164
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 482 bits (1241), Expect = e-136
Identities = 232/237 (97%), Positives = 237/237 (100%)
Frame = +1
Query: 49 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 228
VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP
Sbjct: 204 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 263
Query: 229 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 408
RIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPANQMVKCDPRHGKYM+CCMLYRGDV
Sbjct: 264 RIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMSCCMLYRGDV 323
Query: 409 VPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVRRAVCMLSNTTA 588
VPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV+RAVCMLSNTTA
Sbjct: 324 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA 383
Query: 589 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIDSV 759
IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DSV
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 440
Score = 36.6 bits (83), Expect = 0.089
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFM 47
LTTHTTLEHSDCAFM
Sbjct: 189 LTTHTTLEHSDCAFM 203
>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain
Length = 451
Score = 482 bits (1240), Expect = e-136
Identities = 232/237 (97%), Positives = 237/237 (100%)
Frame = +1
Query: 49 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 228
VDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP
Sbjct: 204 VDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 263
Query: 229 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 408
RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ+VKCDPRHGKYMACCMLYRGDV
Sbjct: 264 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQLVKCDPRHGKYMACCMLYRGDV 323
Query: 409 VPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVRRAVCMLSNTTA 588
VPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV+RAVCMLSNTTA
Sbjct: 324 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA 383
Query: 589 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIDSV 759
IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DSV
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 440
Score = 36.6 bits (83), Expect = 0.089
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFM 47
LTTHTTLEHSDCAFM
Sbjct: 189 LTTHTTLEHSDCAFM 203
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 481 bits (1238), Expect = e-135
Identities = 232/237 (97%), Positives = 235/237 (99%)
Frame = +1
Query: 49 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 228
VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP
Sbjct: 204 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 263
Query: 229 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 408
RIHFPL TYAPVISAEKAYHE LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV
Sbjct: 264 RIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 323
Query: 409 VPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVRRAVCMLSNTTA 588
VPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV+RAVCMLSNTTA
Sbjct: 324 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA 383
Query: 589 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIDSV 759
IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DSV
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 440
Score = 36.6 bits (83), Expect = 0.089
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFM 47
LTTHTTLEHSDCAFM
Sbjct: 189 LTTHTTLEHSDCAFM 203
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 481 bits (1237), Expect = e-135
Identities = 232/236 (98%), Positives = 235/236 (99%)
Frame = +1
Query: 49 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 228
VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP
Sbjct: 204 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 263
Query: 229 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 408
RIHFPL TYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV
Sbjct: 264 RIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 323
Query: 409 VPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVRRAVCMLSNTTA 588
VPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV+RAVCMLSNTTA
Sbjct: 324 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA 383
Query: 589 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIDS 756
IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 439
Score = 36.6 bits (83), Expect = 0.089
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFM 47
LTTHTTLEHSDCAFM
Sbjct: 189 LTTHTTLEHSDCAFM 203
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 479 bits (1234), Expect = e-135
Identities = 230/236 (97%), Positives = 236/236 (100%)
Frame = +1
Query: 49 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 228
VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP
Sbjct: 204 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 263
Query: 229 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 408
RIHFPLATYAPVISAEKAYHEQL+V+EITNACFEPANQMVKCDPRHGKYMACC+LYRGDV
Sbjct: 264 RIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDV 323
Query: 409 VPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVRRAVCMLSNTTA 588
VPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV+RAVCMLSNTTA
Sbjct: 324 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA 383
Query: 589 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIDS 756
IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Score = 36.6 bits (83), Expect = 0.089
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFM 47
LTTHTTLEHSDCAFM
Sbjct: 189 LTTHTTLEHSDCAFM 203
>sp|P02550|TBA_PIG Tubulin alpha chain
Length = 451
Score = 479 bits (1234), Expect = e-135
Identities = 230/237 (97%), Positives = 236/237 (99%)
Frame = +1
Query: 49 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 228
VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP
Sbjct: 204 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 263
Query: 229 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 408
R HFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDV
Sbjct: 264 RAHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDV 323
Query: 409 VPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVRRAVCMLSNTTA 588
VPKDVNA+IATIKTKRTIQFVDWCPTGFKVGINY+PPTVVPGGDLAKV+RAVCMLSNTTA
Sbjct: 324 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYEPPTVVPGGDLAKVQRAVCMLSNTTA 383
Query: 589 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIDSV 759
IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSV 440
Score = 36.6 bits (83), Expect = 0.089
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFM 47
LTTHTTLEHSDCAFM
Sbjct: 189 LTTHTTLEHSDCAFM 203
>sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin I)
sp|P68363|TBAK_HUMAN Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
K-alpha-1)
sp|P05213|TBA2_MOUSE Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin isotype
M-alpha-2)
sp|P68360|TBA1_MERUN Tubulin alpha-1 chain (Alpha-tubulin 1)
sp|Q6P9V9|TBA2_RAT Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 451
Score = 479 bits (1232), Expect = e-135
Identities = 230/237 (97%), Positives = 236/237 (99%)
Frame = +1
Query: 49 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 228
VDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGALNVDLTEFQTNLVPYP
Sbjct: 204 VDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYP 263
Query: 229 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 408
RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDV
Sbjct: 264 RIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDV 323
Query: 409 VPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVRRAVCMLSNTTA 588
VPKDVNA+IATIKTKR+IQFVDWCPTGFKVGINYQPPTVVPGGDLAKV+RAVCMLSNTTA
Sbjct: 324 VPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA 383
Query: 589 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIDSV 759
IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSV 440
Score = 36.6 bits (83), Expect = 0.089
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 3 LTTHTTLEHSDCAFM 47
LTTHTTLEHSDCAFM
Sbjct: 189 LTTHTTLEHSDCAFM 203
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,975,626
Number of Sequences: 369166
Number of extensions: 1942135
Number of successful extensions: 5723
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5474
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8245425915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)