Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_023_F07
(853 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 546 e-155
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 546 e-155
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 545 e-155
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 545 e-155
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 544 e-154
sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain 544 e-154
sp|P52273|TBA_BOMMO Tubulin alpha chain 543 e-154
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 543 e-154
sp|P06605|TBA3_DROME Tubulin alpha-3 chain 543 e-154
sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6... 541 e-154
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 546 bits (1407), Expect = e-155
Identities = 267/283 (94%), Positives = 270/283 (95%)
Frame = +3
Query: 3 LVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQ 182
LVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ
Sbjct: 117 LVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQ 176
Query: 183 IATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 362
++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS
Sbjct: 177 VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 236
Query: 363 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF 542
SITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACF
Sbjct: 237 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACF 296
Query: 543 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 722
EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN
Sbjct: 297 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 356
Query: 723 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 851
YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 357 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 546 bits (1406), Expect = e-155
Identities = 267/283 (94%), Positives = 271/283 (95%)
Frame = +3
Query: 3 LVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQ 182
LVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ
Sbjct: 117 LVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQ 176
Query: 183 IATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 362
I+TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS
Sbjct: 177 ISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 236
Query: 363 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF 542
SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACF
Sbjct: 237 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACF 296
Query: 543 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 722
EPANQMVKCDPRHGKYM+CCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN
Sbjct: 297 EPANQMVKCDPRHGKYMSCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 356
Query: 723 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 851
YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 357 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 545 bits (1404), Expect = e-155
Identities = 267/283 (94%), Positives = 270/283 (95%)
Frame = +3
Query: 3 LVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQ 182
LVLDRIRKLAD CTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ
Sbjct: 117 LVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQ 176
Query: 183 IATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 362
++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS
Sbjct: 177 VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 236
Query: 363 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF 542
SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF
Sbjct: 237 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF 296
Query: 543 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 722
EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN
Sbjct: 297 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 356
Query: 723 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 851
YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 357 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 545 bits (1404), Expect = e-155
Identities = 265/283 (93%), Positives = 271/283 (95%)
Frame = +3
Query: 3 LVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQ 182
LVLDRIRKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ
Sbjct: 117 LVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 176
Query: 183 IATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 362
++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS
Sbjct: 177 VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 236
Query: 363 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF 542
SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF
Sbjct: 237 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF 296
Query: 543 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 722
EPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN
Sbjct: 297 EPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 356
Query: 723 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 851
YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 357 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 544 bits (1402), Expect = e-154
Identities = 266/283 (93%), Positives = 271/283 (95%)
Frame = +3
Query: 3 LVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQ 182
+VLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQ
Sbjct: 117 IVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQ 176
Query: 183 IATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 362
I+TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS
Sbjct: 177 ISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 236
Query: 363 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF 542
SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+V+EITNACF
Sbjct: 237 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACF 296
Query: 543 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 722
EPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN
Sbjct: 297 EPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 356
Query: 723 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 851
YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 357 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain
Length = 451
Score = 544 bits (1402), Expect = e-154
Identities = 266/283 (93%), Positives = 271/283 (95%)
Frame = +3
Query: 3 LVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQ 182
LVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF+VYPAPQ
Sbjct: 117 LVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQ 176
Query: 183 IATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 362
++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVS
Sbjct: 177 VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVS 236
Query: 363 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF 542
SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF
Sbjct: 237 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF 296
Query: 543 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 722
EPANQ+VKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN
Sbjct: 297 EPANQLVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 356
Query: 723 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 851
YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 357 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P52273|TBA_BOMMO Tubulin alpha chain
Length = 450
Score = 543 bits (1400), Expect = e-154
Identities = 266/283 (93%), Positives = 269/283 (95%)
Frame = +3
Query: 3 LVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQ 182
LVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ
Sbjct: 117 LVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQ 176
Query: 183 IATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 362
++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE PTYTNLNRLIGQIVS
Sbjct: 177 VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEPPTYTNLNRLIGQIVS 236
Query: 363 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF 542
SITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACF
Sbjct: 237 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACF 296
Query: 543 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 722
EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN
Sbjct: 297 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 356
Query: 723 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 851
YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 357 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 543 bits (1398), Expect = e-154
Identities = 264/283 (93%), Positives = 269/283 (95%)
Frame = +3
Query: 3 LVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQ 182
LVLDR+RKL+DQCTGLQGFLIFH LLMERLSVDYGKKSKLEFA+YPAPQ
Sbjct: 117 LVLDRVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQ 176
Query: 183 IATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 362
++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS
Sbjct: 177 VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 236
Query: 363 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF 542
SITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHE LSVAEITNACF
Sbjct: 237 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACF 296
Query: 543 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 722
EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN
Sbjct: 297 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 356
Query: 723 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 851
YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 357 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
Length = 450
Score = 543 bits (1398), Expect = e-154
Identities = 267/283 (94%), Positives = 269/283 (95%)
Frame = +3
Query: 3 LVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQ 182
LVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAVYPAPQ
Sbjct: 117 LVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQ 176
Query: 183 IATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 362
++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS
Sbjct: 177 VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 236
Query: 363 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF 542
SITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAPVISAEKAYHEQLSVAEITNACF
Sbjct: 237 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACF 296
Query: 543 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 722
EPANQMVK DPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN
Sbjct: 297 EPANQMVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 356
Query: 723 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 851
YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 357 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6) (Alpha-tubulin isotype
M-alpha-6)
sp|P68365|TBA3_CRIGR Tubulin alpha-3 chain (Alpha-tubulin 3) (Alpha-tubulin III)
Length = 449
Score = 541 bits (1395), Expect = e-154
Identities = 263/283 (92%), Positives = 270/283 (95%)
Frame = +3
Query: 3 LVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQ 182
LVLDRIRKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEF++YPAPQ
Sbjct: 117 LVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQ 176
Query: 183 IATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 362
++TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVS
Sbjct: 177 VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVS 236
Query: 363 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACF 542
SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACF
Sbjct: 237 SITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACF 296
Query: 543 EPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 722
EPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN
Sbjct: 297 EPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 356
Query: 723 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 851
YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 357 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,442,566
Number of Sequences: 369166
Number of extensions: 1984122
Number of successful extensions: 5201
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5100
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)