Planaria EST Database

DrC_00064

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00064
         (1010 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10126|EF1A1_MOUSE  Elongation factor 1-alpha 1 (EF-1-alp...   478   e-134
sp|Q90835|EF1A_CHICK  Elongation factor 1-alpha 1 (EF-1-alph...   478   e-134
sp|P68105|EF1A1_RABIT  Elongation factor 1-alpha 1 (EF-1-alp...   478   e-134
sp|Q5R4R8|EF1A1_PONPY  Elongation factor 1-alpha 1 (EF-1-alp...   476   e-134
sp|P17508|EF1A3_XENLA  Elongation factor 1-alpha, oocyte for...   475   e-133
sp|P13549|EF1A0_XENLA  Elongation factor 1-alpha, somatic fo...   473   e-133
sp|Q71V39|EF1A2_RABIT  Elongation factor 1-alpha 2 (EF-1-alp...   470   e-132
sp|P17507|EF1A2_XENLA  Elongation factor 1-alpha, oocyte for...   470   e-132
sp|P62631|EF1A2_MOUSE  Elongation factor 1-alpha 2 (EF-1-alp...   469   e-132
sp|Q92005|EF1A_BRARE  Elongation factor 1-alpha (EF-1-alpha)      465   e-131

>sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1)
            (eEF1A-1) (Elongation factor Tu) (EF-Tu)
 sp|P62630|EF1A1_RAT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1)
            (eEF1A-1) (Elongation factor Tu) (EF-Tu)
 sp|P62629|EF1A1_CRIGR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1)
            (eEF1A-1) (Elongation factor Tu) (EF-Tu)
          Length = 462

 Score =  478 bits (1229), Expect = e-134
 Identities = 227/293 (77%), Positives = 257/293 (87%)
 Frame = +1

Query: 1    GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
            GVNKMDSTEPP+S KR+EEI KEV +Y+KK+GY PD VAFVPISGWNGDNM+E S NMPW
Sbjct: 151  GVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPW 210

Query: 181  YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
            +KGW++TRK+        SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211  FKGWKVTRKDGS-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG 265

Query: 361  RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
            RVETG+LKPGMVVTFAP  +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV
Sbjct: 266  RVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNV 325

Query: 541  CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGK 720
              DSK+DP  +A  F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK
Sbjct: 326  AGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGK 385

Query: 721  DLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 879
             LED PK  KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 386  KLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438

>sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor Tu)
            (EF-Tu)
          Length = 462

 Score =  478 bits (1229), Expect = e-134
 Identities = 226/293 (77%), Positives = 258/293 (88%)
 Frame = +1

Query: 1    GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
            GVNKMDSTEPP+S KR+EEI KEV +Y+KK+GY PD VAFVPISGWNGDNM+E S+NMPW
Sbjct: 151  GVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSSNMPW 210

Query: 181  YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
            +KGW++TRK+        SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211  FKGWKVTRKDGN-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG 265

Query: 361  RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
            RVETG+LKPGMVVTFAP  +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV
Sbjct: 266  RVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNV 325

Query: 541  CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGK 720
              DSK+DP  +A  F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK
Sbjct: 326  AGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGK 385

Query: 721  DLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 879
             LED PK  KSGDA +V ++P KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 386  KLEDGPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438

>sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1)
            (eEF1A-1) (Elongation factor Tu) (EF-Tu)
 sp|Q5R1X2|EF1A1_PANTR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1)
            (eEF1A-1) (Elongation factor Tu) (EF-Tu)
 sp|P68103|EF1A1_BOVIN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1)
            (eEF1A-1) (Elongation factor Tu) (EF-Tu)
 sp|P68104|EF1A1_HUMAN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1)
            (eEF1A-1) (Elongation factor Tu) (EF-Tu)
 sp|Q66RN5|EF1A1_FELCA Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1)
            (eEF1A-1) (Elongation factor Tu) (EF-Tu)
          Length = 462

 Score =  478 bits (1229), Expect = e-134
 Identities = 227/293 (77%), Positives = 257/293 (87%)
 Frame = +1

Query: 1    GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
            GVNKMDSTEPP+S KR+EEI KEV +Y+KK+GY PD VAFVPISGWNGDNM+E S NMPW
Sbjct: 151  GVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPW 210

Query: 181  YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
            +KGW++TRK+        SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211  FKGWKVTRKDGN-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG 265

Query: 361  RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
            RVETG+LKPGMVVTFAP  +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV
Sbjct: 266  RVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNV 325

Query: 541  CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGK 720
              DSK+DP  +A  F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK
Sbjct: 326  AGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGK 385

Query: 721  DLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 879
             LED PK  KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 386  KLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438

>sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1)
            (eEF1A-1) (Elongation factor Tu) (EF-Tu)
          Length = 462

 Score =  476 bits (1225), Expect = e-134
 Identities = 226/293 (77%), Positives = 257/293 (87%)
 Frame = +1

Query: 1    GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
            GVNKMDSTEPP+S KR+EEI KEV +Y+KK+GY PD VAFVPISGWNGDNM+E S NMPW
Sbjct: 151  GVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPW 210

Query: 181  YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
            +KGW++TRK+        SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211  FKGWKVTRKDGN-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG 265

Query: 361  RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
            RVETG+LKPG+VVTFAP  +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV
Sbjct: 266  RVETGVLKPGVVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNV 325

Query: 541  CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGK 720
              DSK+DP  +A  F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK
Sbjct: 326  AGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGK 385

Query: 721  DLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 879
             LED PK  KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 386  KLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438

>sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1) (EF-1AO1)
          Length = 461

 Score =  475 bits (1222), Expect = e-133
 Identities = 228/293 (77%), Positives = 253/293 (86%)
 Frame = +1

Query: 1    GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
            GVNKMDSTEPPFS KRFEEI KEV +Y+KK+GY P  V FVPISGW+GDNM+E STNMPW
Sbjct: 151  GVNKMDSTEPPFSQKRFEEITKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEASTNMPW 210

Query: 181  YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
            +KGW+I RK     E   SG TLL+ALD + PP RPTNKPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211  FKGWKIERK-----EGNASGITLLEALDCIIPPQRPTNKPLRLPLQDVYKIGGIGTVPVG 265

Query: 361  RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
            RVETG+LKPGM+VTFAP  +TTEVKSVEMHHEAL EALPGDNVGFN+KN+SVK+IRRGNV
Sbjct: 266  RVETGVLKPGMIVTFAPSNVTTEVKSVEMHHEALVEALPGDNVGFNVKNISVKDIRRGNV 325

Query: 541  CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGK 720
              DSK+DP  QA  F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK
Sbjct: 326  AGDSKNDPPMQAGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGK 385

Query: 721  DLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 879
             LED PK  KSGDA +V ++P KPMCVETFS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 386  KLEDDPKFLKSGDAAIVEMIPGKPMCVETFSDYPPLGRFAVRDMRQTVAVGVI 438

>sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic form (EF-1-alpha-S)
          Length = 462

 Score =  473 bits (1218), Expect = e-133
 Identities = 225/293 (76%), Positives = 257/293 (87%)
 Frame = +1

Query: 1    GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
            G+NKMDSTEPP+S KR+EEI KEV +Y+KK+GY PD VAFVPISGWNGDNM+E S NMPW
Sbjct: 151  GINKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSPNMPW 210

Query: 181  YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
            +KGW+ITRK     E   SG TLL+ALD + PP+RPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211  FKGWKITRK-----EGSGSGTTLLEALDCILPPSRPTDKPLRLPLQDVYKIGGIGTVPVG 265

Query: 361  RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
            RVETG++KPGMVVTFAP  +TTEVKSVEMHHEALTEA+PGDNVGFN+KNVSVK++RRGNV
Sbjct: 266  RVETGVIKPGMVVTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNV 325

Query: 541  CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGK 720
              DSK+DP  +A  F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK
Sbjct: 326  AGDSKNDPPMEAGSFTAQVIILNHPGQIGAGYAPVLDCHTAHIACKFAELKEKIDRRSGK 385

Query: 721  DLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 879
             LED PK  KSGDA +V ++P KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 386  KLEDNPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438

>sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1 A-2)
            (eEF1A-2) (Statin S1)
 sp|Q05639|EF1A2_HUMAN Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1 A-2)
            (eEF1A-2) (Statin S1)
          Length = 463

 Score =  470 bits (1210), Expect = e-132
 Identities = 223/293 (76%), Positives = 257/293 (87%)
 Frame = +1

Query: 1    GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
            GVNKMDSTEP +S+KR++EI KEV +Y+KK+GY P  V FVPISGW+GDNM+E S NMPW
Sbjct: 151  GVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPW 210

Query: 181  YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
            +KGW++ RK     E   SG +LL+ALD++ PPTRPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211  FKGWKVERK-----EGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG 265

Query: 361  RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
            RVETGIL+PGMVVTFAP  +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK+IRRGNV
Sbjct: 266  RVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNV 325

Query: 541  CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGK 720
            C DSKSDP ++A  F +QVII+NHPG+I AGYSPV+DCHTAHIACKFAEL +KIDRRSGK
Sbjct: 326  CGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGK 385

Query: 721  DLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 879
             LED PK  KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 386  KLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVI 438

>sp|P17507|EF1A2_XENLA Elongation factor 1-alpha, oocyte form (EF-1-alpha-O) (EF-1AO) (42S
            p48)
          Length = 461

 Score =  470 bits (1210), Expect = e-132
 Identities = 226/293 (77%), Positives = 252/293 (86%)
 Frame = +1

Query: 1    GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
            GVNKMDSTEPPFS KRFEEI KEV +Y+KK+GY P  V FVPISGW+GDNM+E STNMPW
Sbjct: 151  GVNKMDSTEPPFSQKRFEEITKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEASTNMPW 210

Query: 181  YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
            +KGW+I RK     E   SG TLL+ALD + PP RPT KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211  FKGWKIERK-----EGNASGVTLLEALDCIIPPQRPTAKPLRLPLQDVYKIGGIGTVPVG 265

Query: 361  RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
            RVETG+LKPGM+VTFAP  +TTEVKSVEMHHEAL EALPGDNVGFN+KN+SVK+IRRGNV
Sbjct: 266  RVETGVLKPGMIVTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNV 325

Query: 541  CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGK 720
              DSK+DP  QA  F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK
Sbjct: 326  AGDSKNDPPMQAGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGK 385

Query: 721  DLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 879
             LED PK  KSGDA +V ++P KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 386  KLEDDPKFLKSGDAAIVEMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438

>sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1 A-2)
            (eEF1A-2) (Statin S1)
 sp|P62632|EF1A2_RAT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1 A-2)
            (eEF1A-2) (Statin S1)
          Length = 463

 Score =  469 bits (1207), Expect = e-132
 Identities = 222/293 (75%), Positives = 257/293 (87%)
 Frame = +1

Query: 1    GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
            GVNKMDSTEP +S+KR++EI KEV +Y+KK+GY P  V FVPISGW+GDNM+E S NMPW
Sbjct: 151  GVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPW 210

Query: 181  YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
            +KGW++ RK     E   SG +LL+ALD++ PPTRPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211  FKGWKVERK-----EGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG 265

Query: 361  RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
            RVETGIL+PGMVVTFAP  +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK+IRRGNV
Sbjct: 266  RVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNV 325

Query: 541  CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGK 720
            C DSK+DP ++A  F +QVII+NHPG+I AGYSPV+DCHTAHIACKFAEL +KIDRRSGK
Sbjct: 326  CGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGK 385

Query: 721  DLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 879
             LED PK  KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 386  KLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVI 438

>sp|Q92005|EF1A_BRARE Elongation factor 1-alpha (EF-1-alpha)
          Length = 462

 Score =  465 bits (1197), Expect = e-131
 Identities = 224/293 (76%), Positives = 254/293 (86%)
 Frame = +1

Query: 1    GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
            GVNKMDSTEPP+S  RFEEI KEV +Y+KK+GY P +VAFVPISGW+GDNM+E S+NM W
Sbjct: 151  GVNKMDSTEPPYSQARFEEITKEVSAYIKKIGYNPASVAFVPISGWHGDNMLEASSNMGW 210

Query: 181  YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
            +KGW+I RK     E   SG TLLDALD++ PP+RPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211  FKGWKIERK-----EGNASGTTLLDALDAILPPSRPTDKPLRLPLQDVYKIGGIGTVPVG 265

Query: 361  RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
            RVETG+LKPGMVVTFAP  +TTEVKSVEMHHE+LTEA PGDNVGFN+KNVSVK+IRRGNV
Sbjct: 266  RVETGVLKPGMVVTFAPANVTTEVKSVEMHHESLTEATPGDNVGFNVKNVSVKDIRRGNV 325

Query: 541  CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGK 720
              DSK+DP  +A +F AQVII+NHPG+I  GY+PVLDCHTAHIACKFAEL +KIDRRSGK
Sbjct: 326  AGDSKNDPPMEAANFNAQVIILNHPGQISQGYAPVLDCHTAHIACKFAELKEKIDRRSGK 385

Query: 721  DLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 879
             LED PK  KSGDA +V +VP KPMCVE+FS YPPLGRFAVRDM+QTVAVGVI
Sbjct: 386  KLEDNPKALKSGDAAIVEMVPGKPMCVESFSTYPPLGRFAVRDMRQTVAVGVI 438

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,811,129
Number of Sequences: 369166
Number of extensions: 2371127
Number of successful extensions: 8229
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7775
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10766113875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00064

  1. Dr_sW_021_L19
  2. Dr_sW_006_K22
  3. Dr_sW_014_D21
  4. Dr_sW_025_O24
  5. Dr_sW_023_M13
  6. Dr_sW_015_P14
  7. Dr_sW_025_E20
  8. Dr_sW_002_K02
  9. Dr_sW_012_C06
  10. Dr_sW_014_C14
  11. Dr_sW_027_F23
  12. Dr_sW_007_L17
  13. Dr_sW_018_F20
  14. Dr_sW_027_I05
  15. Dr_sW_007_L18
  16. Dr_sW_024_F13
  17. Dr_sW_016_L21
  18. Dr_sW_001_N17
  19. Dr_sW_014_B22
  20. Dr_sW_022_P05
  21. Dr_sW_009_H07
  22. Dr_sW_017_C07
  23. Dr_sW_005_C02
  24. Dr_sW_011_B11
  25. Dr_sW_010_M09
  26. Dr_sW_005_F01
  27. Dr_sW_019_C24
  28. Dr_sW_023_H15
  29. Dr_sW_009_C21
  30. Dr_sW_025_E21
  31. Dr_sW_013_A01
  32. Dr_sW_021_G09
  33. Dr_sW_004_D21
  34. Dr_sW_004_C22
  35. Dr_sW_005_P05
  36. Dr_sW_001_M11
  37. Dr_sW_001_H23