Planarian EST Database


Dr_sW_024_F13

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_024_F13
         (756 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q71V39|EF1A2_RABIT  Elongation factor 1-alpha 2 (EF-1-alp...   362   e-100
sp|P27592|EF1A_ONCVO  Elongation factor 1-alpha (EF-1-alpha)      362   e-100
sp|P62631|EF1A2_MOUSE  Elongation factor 1-alpha 2 (EF-1-alp...   361   1e-99
sp|P17508|EF1A3_XENLA  Elongation factor 1-alpha, oocyte for...   358   7e-99
sp|P41745|EF1A_ARXAD  Elongation factor 1-alpha (EF-1-alpha)      356   4e-98
sp|P10126|EF1A1_MOUSE  Elongation factor 1-alpha 1 (EF-1-alp...   355   6e-98
sp|P68105|EF1A1_RABIT  Elongation factor 1-alpha 1 (EF-1-alp...   355   6e-98
sp|P28295|EF1A_ABSGL  Elongation factor 1-alpha (EF-1-alpha)      355   6e-98
sp|Q90835|EF1A_CHICK  Elongation factor 1-alpha 1 (EF-1-alph...   355   7e-98
sp|P53013|EF1A_CAEEL  Elongation factor 1-alpha (EF-1-alpha)      355   7e-98
>sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
           A-2) (eEF1A-2) (Statin S1)
 sp|Q05639|EF1A2_HUMAN Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
           A-2) (eEF1A-2) (Statin S1)
          Length = 463

 Score =  362 bits (929), Expect = e-100
 Identities = 175/222 (78%), Positives = 198/222 (89%)
 Frame = +1

Query: 1   KKEEIKTSGKTLLDALVL*GPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGM 180
           +++E   SG +LL+AL    PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETGIL+PGM
Sbjct: 217 ERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGM 276

Query: 181 VVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQ 360
           VVTFAP  +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK+IRRGNVC DSKSDP ++
Sbjct: 277 VVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQE 336

Query: 361 ATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKS 540
           A  F +QVII+NHPG+I AGYSPV+DCHTAHIACKFAEL +KIDRRSGK LED PK  KS
Sbjct: 337 AAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKS 396

Query: 541 GDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 666
           GDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 397 GDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVI 438
>sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha)
          Length = 464

 Score =  362 bits (928), Expect = e-100
 Identities = 173/222 (77%), Positives = 200/222 (90%)
 Frame = +1

Query: 1   KKEEIKTSGKTLLDALVL*GPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGM 180
           +++E   +GKTLL+AL    PP RPT+KPLRLPLQDVYKIGGIGTVPVGRVETGILKPGM
Sbjct: 217 ERKEGTMTGKTLLEALDSVVPPQRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGM 276

Query: 181 VVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQ 360
           +VTFAPQ LTTEVKSVEMHHEAL EALPGDNVGFN+KN+S+K+IRRG+V SDSK+DPA++
Sbjct: 277 IVTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKE 336

Query: 361 ATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKS 540
              F AQVIIMNHPG+I AGY+PVLDCHTAHIACKFAEL +K+DRRSGK +ED PK  KS
Sbjct: 337 TKMFTAQVIIMNHPGQISAGYTPVLDCHTAHIACKFAELKEKVDRRSGKKVEDNPKSLKS 396

Query: 541 GDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 666
           GDAG++ L+P+KP+CVETF+EYPPLGRFAVRDM+QTVAVGVI
Sbjct: 397 GDAGIIDLIPTKPLCVETFTEYPPLGRFAVRDMRQTVAVGVI 438
>sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
           A-2) (eEF1A-2) (Statin S1)
 sp|P62632|EF1A2_RAT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
           A-2) (eEF1A-2) (Statin S1)
          Length = 463

 Score =  361 bits (926), Expect = 1e-99
 Identities = 174/222 (78%), Positives = 198/222 (89%)
 Frame = +1

Query: 1   KKEEIKTSGKTLLDALVL*GPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGM 180
           +++E   SG +LL+AL    PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETGIL+PGM
Sbjct: 217 ERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGM 276

Query: 181 VVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQ 360
           VVTFAP  +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK+IRRGNVC DSK+DP ++
Sbjct: 277 VVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKADPPQE 336

Query: 361 ATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKS 540
           A  F +QVII+NHPG+I AGYSPV+DCHTAHIACKFAEL +KIDRRSGK LED PK  KS
Sbjct: 337 AAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKS 396

Query: 541 GDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 666
           GDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 397 GDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVI 438
>sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1) (EF-1AO1)
          Length = 461

 Score =  358 bits (920), Expect = 7e-99
 Identities = 174/222 (78%), Positives = 194/222 (87%)
 Frame = +1

Query: 1   KKEEIKTSGKTLLDALVL*GPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGM 180
           +++E   SG TLL+AL    PP RPTNKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGM
Sbjct: 217 ERKEGNASGITLLEALDCIIPPQRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM 276

Query: 181 VVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQ 360
           +VTFAP  +TTEVKSVEMHHEAL EALPGDNVGFN+KN+SVK+IRRGNV  DSK+DP  Q
Sbjct: 277 IVTFAPSNVTTEVKSVEMHHEALVEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQ 336

Query: 361 ATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKS 540
           A  F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK  KS
Sbjct: 337 AGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKS 396

Query: 541 GDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 666
           GDA +V ++P KPMCVETFS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 397 GDAAIVEMIPGKPMCVETFSDYPPLGRFAVRDMRQTVAVGVI 438
>sp|P41745|EF1A_ARXAD Elongation factor 1-alpha (EF-1-alpha)
          Length = 459

 Score =  356 bits (913), Expect = 4e-98
 Identities = 171/220 (77%), Positives = 194/220 (88%)
 Frame = +1

Query: 7   EEIKTSGKTLLDALVL*GPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVV 186
           +E K +GKTLL+A+    PPTRP++KPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVV
Sbjct: 217 KEGKATGKTLLEAIDAVDPPTRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVV 276

Query: 187 TFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQAT 366
           TFAP G+TTEVKSVEMHHE L E LPGDNVGFN+KNVSVKEIRRGNV  DSK+DP +   
Sbjct: 277 TFAPAGVTTEVKSVEMHHEQLPEGLPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPKGCD 336

Query: 367 DFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGD 546
            F AQVII NHPG+I AGYSPVLDCHTAHIAC+F EL++KIDRRSGK +ED PK  K+GD
Sbjct: 337 SFTAQVIIFNHPGQISAGYSPVLDCHTAHIACRFDELIEKIDRRSGKKVEDSPKFVKAGD 396

Query: 547 AGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 666
           A +VR++PSKPMCVETF+EYPPLGRFAVRDM+QTVAVGVI
Sbjct: 397 AAIVRMIPSKPMCVETFTEYPPLGRFAVRDMRQTVAVGVI 436
>sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
           A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
 sp|P62630|EF1A1_RAT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
           A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
 sp|P62629|EF1A1_CRIGR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
           A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
          Length = 462

 Score =  355 bits (912), Expect = 6e-98
 Identities = 173/221 (78%), Positives = 195/221 (88%)
 Frame = +1

Query: 4   KEEIKTSGKTLLDALVL*GPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMV 183
           +++   SG TLL+AL    PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMV
Sbjct: 218 RKDGSASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMV 277

Query: 184 VTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQA 363
           VTFAP  +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV  DSK+DP  +A
Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337

Query: 364 TDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSG 543
             F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK  KSG
Sbjct: 338 AGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSG 397

Query: 544 DAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 666
           DA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 398 DAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438
>sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
           A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
 sp|Q5R1X2|EF1A1_PANTR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
           A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
 sp|P68103|EF1A1_BOVIN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
           A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
 sp|P68104|EF1A1_HUMAN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
           A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
 sp|Q66RN5|EF1A1_FELCA Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
           A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
          Length = 462

 Score =  355 bits (912), Expect = 6e-98
 Identities = 173/221 (78%), Positives = 195/221 (88%)
 Frame = +1

Query: 4   KEEIKTSGKTLLDALVL*GPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMV 183
           +++   SG TLL+AL    PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMV
Sbjct: 218 RKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMV 277

Query: 184 VTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQA 363
           VTFAP  +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV  DSK+DP  +A
Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337

Query: 364 TDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSG 543
             F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK  KSG
Sbjct: 338 AGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSG 397

Query: 544 DAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 666
           DA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 398 DAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438
>sp|P28295|EF1A_ABSGL Elongation factor 1-alpha (EF-1-alpha)
          Length = 458

 Score =  355 bits (912), Expect = 6e-98
 Identities = 168/215 (78%), Positives = 194/215 (90%)
 Frame = +1

Query: 22  SGKTLLDALVL*GPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQ 201
           SGKTLLDA+    PP RP++KPLRLPLQDVYKIGGIGTVPVGRVETG++K GMVVTFAP 
Sbjct: 222 SGKTLLDAIDAIDPPQRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVTFAPA 281

Query: 202 GLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQ 381
            +TTEVKSVEMHHE L E LPGDNVGFN+KNVSVK+IRRGNVCSDSK+DPA++A  F AQ
Sbjct: 282 NVTTEVKSVEMHHEQLVEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKEAGSFTAQ 341

Query: 382 VIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVR 561
           VI++NHPG+I AGY+PVLDCHTAHIACKFAEL++KIDRRSGK LED PK  KSGD+ +V+
Sbjct: 342 VIVLNHPGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRSGKKLEDAPKFVKSGDSAIVK 401

Query: 562 LVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 666
           ++PSKPMCVE +++YPPLGRFAVRDM+QTVAVGVI
Sbjct: 402 MIPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVI 436
>sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor Tu)
           (EF-Tu)
          Length = 462

 Score =  355 bits (911), Expect = 7e-98
 Identities = 172/221 (77%), Positives = 195/221 (88%)
 Frame = +1

Query: 4   KEEIKTSGKTLLDALVL*GPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMV 183
           +++   SG TLL+AL    PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMV
Sbjct: 218 RKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMV 277

Query: 184 VTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQA 363
           VTFAP  +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV  DSK+DP  +A
Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337

Query: 364 TDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSG 543
             F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK  KSG
Sbjct: 338 AGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSG 397

Query: 544 DAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 666
           DA +V ++P KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 398 DAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438
>sp|P53013|EF1A_CAEEL Elongation factor 1-alpha (EF-1-alpha)
          Length = 463

 Score =  355 bits (911), Expect = 7e-98
 Identities = 170/222 (76%), Positives = 199/222 (89%)
 Frame = +1

Query: 1   KKEEIKTSGKTLLDALVL*GPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGM 180
           +++E   SGKTLL+AL    PP RPT++PLRLPLQDVYKIGGIGTVPVGRVETGI+KPGM
Sbjct: 217 ERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGM 276

Query: 181 VVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQ 360
           VVTFAPQ +TTEVKSVEMHHE+L EA+PGDNVGFN+KNVSVK+IRRG+VCSDSK DPA++
Sbjct: 277 VVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKE 336

Query: 361 ATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKS 540
           A  F AQVIIMNHPG+I  GY+PVLDCHTAHIACKF EL +K+DRR+GK +EDFPK  KS
Sbjct: 337 ARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKS 396

Query: 541 GDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 666
           GDAG+V L+P+KP+CVE+F++Y PLGRFAVRDM+QTVAVGVI
Sbjct: 397 GDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVI 438
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,760,932
Number of Sequences: 369166
Number of extensions: 1807164
Number of successful extensions: 5692
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5398
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6921714800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)