Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_K02
(762 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alph... 392 e-109
sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alp... 392 e-109
sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alp... 392 e-109
sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alp... 390 e-108
sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic fo... 388 e-108
sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte for... 387 e-107
sp|P17507|EF1A2_XENLA Elongation factor 1-alpha, oocyte for... 384 e-106
sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alp... 383 e-106
sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alp... 382 e-106
sp|P02993|EF1A_ARTSA Elongation factor 1-alpha (EF-1-alpha) 379 e-105
>sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor Tu)
(EF-Tu)
Length = 462
Score = 392 bits (1008), Expect = e-109
Identities = 185/240 (77%), Positives = 211/240 (87%)
Frame = +1
Query: 1 GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
GVNKMDSTEPP+S KR+EEI KEV +Y+KK+GY PD VAFVPISGWNGDNM+E S+NMPW
Sbjct: 151 GVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSSNMPW 210
Query: 181 YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
+KGW++TRK+ SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211 FKGWKVTRKDGN-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG 265
Query: 361 RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
RVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV
Sbjct: 266 RVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNV 325
Query: 541 CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSEK 720
DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRS K
Sbjct: 326 AGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGK 385
>sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62630|EF1A1_RAT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62629|EF1A1_CRIGR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 392 bits (1007), Expect = e-109
Identities = 185/240 (77%), Positives = 210/240 (87%)
Frame = +1
Query: 1 GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
GVNKMDSTEPP+S KR+EEI KEV +Y+KK+GY PD VAFVPISGWNGDNM+E S NMPW
Sbjct: 151 GVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPW 210
Query: 181 YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
+KGW++TRK+ SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211 FKGWKVTRKDGS-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG 265
Query: 361 RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
RVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV
Sbjct: 266 RVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNV 325
Query: 541 CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSEK 720
DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRS K
Sbjct: 326 AGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGK 385
>sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q5R1X2|EF1A1_PANTR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68103|EF1A1_BOVIN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68104|EF1A1_HUMAN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q66RN5|EF1A1_FELCA Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 392 bits (1007), Expect = e-109
Identities = 185/240 (77%), Positives = 210/240 (87%)
Frame = +1
Query: 1 GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
GVNKMDSTEPP+S KR+EEI KEV +Y+KK+GY PD VAFVPISGWNGDNM+E S NMPW
Sbjct: 151 GVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPW 210
Query: 181 YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
+KGW++TRK+ SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211 FKGWKVTRKDGN-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG 265
Query: 361 RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
RVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV
Sbjct: 266 RVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNV 325
Query: 541 CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSEK 720
DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRS K
Sbjct: 326 AGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGK 385
>sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 390 bits (1003), Expect = e-108
Identities = 184/240 (76%), Positives = 210/240 (87%)
Frame = +1
Query: 1 GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
GVNKMDSTEPP+S KR+EEI KEV +Y+KK+GY PD VAFVPISGWNGDNM+E S NMPW
Sbjct: 151 GVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPW 210
Query: 181 YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
+KGW++TRK+ SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211 FKGWKVTRKDGN-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG 265
Query: 361 RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
RVETG+LKPG+VVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV
Sbjct: 266 RVETGVLKPGVVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNV 325
Query: 541 CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSEK 720
DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRS K
Sbjct: 326 AGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGK 385
>sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic form (EF-1-alpha-S)
Length = 462
Score = 388 bits (997), Expect = e-108
Identities = 184/240 (76%), Positives = 210/240 (87%)
Frame = +1
Query: 1 GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
G+NKMDSTEPP+S KR+EEI KEV +Y+KK+GY PD VAFVPISGWNGDNM+E S NMPW
Sbjct: 151 GINKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSPNMPW 210
Query: 181 YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
+KGW+ITRK E SG TLL+ALD + PP+RPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211 FKGWKITRK-----EGSGSGTTLLEALDCILPPSRPTDKPLRLPLQDVYKIGGIGTVPVG 265
Query: 361 RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
RVETG++KPGMVVTFAP +TTEVKSVEMHHEALTEA+PGDNVGFN+KNVSVK++RRGNV
Sbjct: 266 RVETGVIKPGMVVTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNV 325
Query: 541 CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSEK 720
DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRS K
Sbjct: 326 AGDSKNDPPMEAGSFTAQVIILNHPGQIGAGYAPVLDCHTAHIACKFAELKEKIDRRSGK 385
>sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1) (EF-1AO1)
Length = 461
Score = 387 bits (995), Expect = e-107
Identities = 186/240 (77%), Positives = 206/240 (85%)
Frame = +1
Query: 1 GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
GVNKMDSTEPPFS KRFEEI KEV +Y+KK+GY P V FVPISGW+GDNM+E STNMPW
Sbjct: 151 GVNKMDSTEPPFSQKRFEEITKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEASTNMPW 210
Query: 181 YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
+KGW+I RK E SG TLL+ALD + PP RPTNKPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211 FKGWKIERK-----EGNASGITLLEALDCIIPPQRPTNKPLRLPLQDVYKIGGIGTVPVG 265
Query: 361 RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
RVETG+LKPGM+VTFAP +TTEVKSVEMHHEAL EALPGDNVGFN+KN+SVK+IRRGNV
Sbjct: 266 RVETGVLKPGMIVTFAPSNVTTEVKSVEMHHEALVEALPGDNVGFNVKNISVKDIRRGNV 325
Query: 541 CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSEK 720
DSK+DP QA F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRS K
Sbjct: 326 AGDSKNDPPMQAGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGK 385
>sp|P17507|EF1A2_XENLA Elongation factor 1-alpha, oocyte form (EF-1-alpha-O) (EF-1AO) (42S
p48)
Length = 461
Score = 384 bits (987), Expect = e-106
Identities = 185/240 (77%), Positives = 205/240 (85%)
Frame = +1
Query: 1 GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
GVNKMDSTEPPFS KRFEEI KEV +Y+KK+GY P V FVPISGW+GDNM+E STNMPW
Sbjct: 151 GVNKMDSTEPPFSQKRFEEITKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEASTNMPW 210
Query: 181 YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
+KGW+I RK E SG TLL+ALD + PP RPT KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211 FKGWKIERK-----EGNASGVTLLEALDCIIPPQRPTAKPLRLPLQDVYKIGGIGTVPVG 265
Query: 361 RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
RVETG+LKPGM+VTFAP +TTEVKSVEMHHEAL EALPGDNVGFN+KN+SVK+IRRGNV
Sbjct: 266 RVETGVLKPGMIVTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNV 325
Query: 541 CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSEK 720
DSK+DP QA F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRS K
Sbjct: 326 AGDSKNDPPMQAGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGK 385
>sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|Q05639|EF1A2_HUMAN Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 383 bits (983), Expect = e-106
Identities = 181/240 (75%), Positives = 210/240 (87%)
Frame = +1
Query: 1 GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
GVNKMDSTEP +S+KR++EI KEV +Y+KK+GY P V FVPISGW+GDNM+E S NMPW
Sbjct: 151 GVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPW 210
Query: 181 YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
+KGW++ RK E SG +LL+ALD++ PPTRPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211 FKGWKVERK-----EGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG 265
Query: 361 RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
RVETGIL+PGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK+IRRGNV
Sbjct: 266 RVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNV 325
Query: 541 CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSEK 720
C DSKSDP ++A F +QVII+NHPG+I AGYSPV+DCHTAHIACKFAEL +KIDRRS K
Sbjct: 326 CGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGK 385
>sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|P62632|EF1A2_RAT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 382 bits (980), Expect = e-106
Identities = 180/240 (75%), Positives = 210/240 (87%)
Frame = +1
Query: 1 GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
GVNKMDSTEP +S+KR++EI KEV +Y+KK+GY P V FVPISGW+GDNM+E S NMPW
Sbjct: 151 GVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPW 210
Query: 181 YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
+KGW++ RK E SG +LL+ALD++ PPTRPT+KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211 FKGWKVERK-----EGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG 265
Query: 361 RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
RVETGIL+PGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK+IRRGNV
Sbjct: 266 RVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNV 325
Query: 541 CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSEK 720
C DSK+DP ++A F +QVII+NHPG+I AGYSPV+DCHTAHIACKFAEL +KIDRRS K
Sbjct: 326 CGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGK 385
>sp|P02993|EF1A_ARTSA Elongation factor 1-alpha (EF-1-alpha)
Length = 462
Score = 379 bits (974), Expect = e-105
Identities = 179/240 (74%), Positives = 207/240 (86%)
Frame = +1
Query: 1 GVNKMDSTEPPFSDKRFEEIKKEVGSYLKKVGYQPDAVAFVPISGWNGDNMIEESTNMPW 180
GVNKMDSTEPPFS+ RFEEIKKEV +Y+KK+GY P AVAFVPISGW+GDNM+E S +PW
Sbjct: 151 GVNKMDSTEPPFSEARFEEIKKEVSAYIKKIGYNPAAVAFVPISGWHGDNMLEASDRLPW 210
Query: 181 YKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVG 360
YKGW I RK K + GKTLLDALD++ PP+RPT KPLRLPLQDVYKIGGIGTVPVG
Sbjct: 211 YKGWNIERKEGKAD-----GKTLLDALDAILPPSRPTEKPLRLPLQDVYKIGGIGTVPVG 265
Query: 361 RVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNV 540
RVETGI+KPGM+VTFAP +TTEVKSVEMHHE+L +A PGDNVGFN+KNVSVKE+RRG V
Sbjct: 266 RVETGIIKPGMIVTFAPANITTEVKSVEMHHESLEQASPGDNVGFNVKNVSVKELRRGYV 325
Query: 541 CSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSEK 720
SDSK++PAR + DF AQVI++NHPG+I GY+PVLDCHTAHIACKFAE+ +K DRR+ K
Sbjct: 326 ASDSKNNPARGSQDFFAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGK 385
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.314 0.133 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,534,999
Number of Sequences: 369166
Number of extensions: 1898452
Number of successful extensions: 5441
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5077
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7018522000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)