Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_L21
(784 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha) 380 e-105
sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alp... 378 e-104
sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alp... 377 e-104
sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alp... 376 e-104
sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alp... 376 e-104
sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte for... 375 e-104
sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alph... 375 e-104
sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alp... 375 e-104
sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic fo... 373 e-103
sp|P53013|EF1A_CAEEL Elongation factor 1-alpha (EF-1-alpha) 372 e-103
>sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha)
Length = 464
Score = 380 bits (976), Expect = e-105
Identities = 184/243 (75%), Positives = 211/243 (86%)
Frame = +2
Query: 2 GWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRV 181
GW + RK E +GKTLL+ALDS+ PP RPT+KPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GWSVERK-----EGTMTGKTLLEALDSVVPPQRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267
Query: 182 ETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCS 361
ETGILKPGM+VTFAPQ LTTEVKSVEMHHEAL EALPGDNVGFN+KN+S+K+IRRG+V S
Sbjct: 268 ETGILKPGMIVTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVAS 327
Query: 362 DSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDL 541
DSK+DPA++ F AQVIIMNHPG+I AGY+PVLDCHTAHIACKFAEL +K+DRRSGK +
Sbjct: 328 DSKNDPAKETKMFTAQVIIMNHPGQISAGYTPVLDCHTAHIACKFAELKEKVDRRSGKKV 387
Query: 542 EDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKHTVAVGVIKEVTKNAVE 721
ED PK KSGDAG++ L+P+KP+CVETF+EYPPLGRFAVRDM+ TVAVGVIK V K+
Sbjct: 388 EDNPKSLKSGDAGIIDLIPTKPLCVETFTEYPPLGRFAVRDMRQTVAVGVIKNVDKSEGV 447
Query: 722 GKV 730
GKV
Sbjct: 448 GKV 450
>sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|Q05639|EF1A2_HUMAN Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 378 bits (970), Expect = e-104
Identities = 186/245 (75%), Positives = 211/245 (86%), Gaps = 1/245 (0%)
Frame = +2
Query: 2 GWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRV 181
GW++ RK E SG +LL+ALD++ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GWKVERK-----EGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267
Query: 182 ETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCS 361
ETGIL+PGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK+IRRGNVC
Sbjct: 268 ETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCG 327
Query: 362 DSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDL 541
DSKSDP ++A F +QVII+NHPG+I AGYSPV+DCHTAHIACKFAEL +KIDRRSGK L
Sbjct: 328 DSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKL 387
Query: 542 EDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKHTVAVGVIKEV-TKNAV 718
ED PK KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+ TVAVGVIK V K+
Sbjct: 388 EDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKKSGG 447
Query: 719 EGKVT 733
GKVT
Sbjct: 448 AGKVT 452
>sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|P62632|EF1A2_RAT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 377 bits (967), Expect = e-104
Identities = 185/245 (75%), Positives = 211/245 (86%), Gaps = 1/245 (0%)
Frame = +2
Query: 2 GWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRV 181
GW++ RK E SG +LL+ALD++ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GWKVERK-----EGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267
Query: 182 ETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCS 361
ETGIL+PGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK+IRRGNVC
Sbjct: 268 ETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCG 327
Query: 362 DSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDL 541
DSK+DP ++A F +QVII+NHPG+I AGYSPV+DCHTAHIACKFAEL +KIDRRSGK L
Sbjct: 328 DSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKL 387
Query: 542 EDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKHTVAVGVIKEV-TKNAV 718
ED PK KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+ TVAVGVIK V K+
Sbjct: 388 EDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKKSGG 447
Query: 719 EGKVT 733
GKVT
Sbjct: 448 AGKVT 452
>sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62630|EF1A1_RAT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62629|EF1A1_CRIGR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 376 bits (966), Expect = e-104
Identities = 186/245 (75%), Positives = 209/245 (85%), Gaps = 1/245 (0%)
Frame = +2
Query: 2 GWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRV 181
GW++TRK+ SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GWKVTRKDGS-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267
Query: 182 ETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCS 361
ETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV
Sbjct: 268 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 327
Query: 362 DSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDL 541
DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK L
Sbjct: 328 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 387
Query: 542 EDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKHTVAVGVIKEVTKNAV- 718
ED PK KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+ TVAVGVIK V K A
Sbjct: 388 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAG 447
Query: 719 EGKVT 733
GKVT
Sbjct: 448 AGKVT 452
>sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q5R1X2|EF1A1_PANTR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68103|EF1A1_BOVIN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68104|EF1A1_HUMAN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q66RN5|EF1A1_FELCA Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 376 bits (966), Expect = e-104
Identities = 186/245 (75%), Positives = 209/245 (85%), Gaps = 1/245 (0%)
Frame = +2
Query: 2 GWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRV 181
GW++TRK+ SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GWKVTRKDGN-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267
Query: 182 ETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCS 361
ETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV
Sbjct: 268 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 327
Query: 362 DSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDL 541
DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK L
Sbjct: 328 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 387
Query: 542 EDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKHTVAVGVIKEVTKNAV- 718
ED PK KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+ TVAVGVIK V K A
Sbjct: 388 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAG 447
Query: 719 EGKVT 733
GKVT
Sbjct: 448 AGKVT 452
>sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1) (EF-1AO1)
Length = 461
Score = 375 bits (963), Expect = e-104
Identities = 187/245 (76%), Positives = 206/245 (84%), Gaps = 1/245 (0%)
Frame = +2
Query: 2 GWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRV 181
GW+I RK E SG TLL+ALD + PP RPTNKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GWKIERK-----EGNASGITLLEALDCIIPPQRPTNKPLRLPLQDVYKIGGIGTVPVGRV 267
Query: 182 ETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCS 361
ETG+LKPGM+VTFAP +TTEVKSVEMHHEAL EALPGDNVGFN+KN+SVK+IRRGNV
Sbjct: 268 ETGVLKPGMIVTFAPSNVTTEVKSVEMHHEALVEALPGDNVGFNVKNISVKDIRRGNVAG 327
Query: 362 DSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDL 541
DSK+DP QA F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK L
Sbjct: 328 DSKNDPPMQAGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGKKL 387
Query: 542 EDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKHTVAVGVIKEVTKN-AV 718
ED PK KSGDA +V ++P KPMCVETFS+YPPLGRFAVRDM+ TVAVGVIK V K A
Sbjct: 388 EDDPKFLKSGDAAIVEMIPGKPMCVETFSDYPPLGRFAVRDMRQTVAVGVIKGVDKKLAS 447
Query: 719 EGKVT 733
GKVT
Sbjct: 448 SGKVT 452
>sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor Tu)
(EF-Tu)
Length = 462
Score = 375 bits (962), Expect = e-104
Identities = 185/245 (75%), Positives = 209/245 (85%), Gaps = 1/245 (0%)
Frame = +2
Query: 2 GWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRV 181
GW++TRK+ SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GWKVTRKDGN-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267
Query: 182 ETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCS 361
ETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV
Sbjct: 268 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 327
Query: 362 DSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDL 541
DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK L
Sbjct: 328 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 387
Query: 542 EDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKHTVAVGVIKEVTKNA-V 718
ED PK KSGDA +V ++P KPMCVE+FS+YPPLGRFAVRDM+ TVAVGVIK V K A
Sbjct: 388 EDGPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAGG 447
Query: 719 EGKVT 733
GKVT
Sbjct: 448 AGKVT 452
>sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 375 bits (962), Expect = e-104
Identities = 185/245 (75%), Positives = 209/245 (85%), Gaps = 1/245 (0%)
Frame = +2
Query: 2 GWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRV 181
GW++TRK+ SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GWKVTRKDGN-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267
Query: 182 ETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCS 361
ETG+LKPG+VVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRGNV
Sbjct: 268 ETGVLKPGVVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 327
Query: 362 DSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDL 541
DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK L
Sbjct: 328 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 387
Query: 542 EDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKHTVAVGVIKEVTKNAV- 718
ED PK KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+ TVAVGVIK V K A
Sbjct: 388 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAG 447
Query: 719 EGKVT 733
GKVT
Sbjct: 448 AGKVT 452
>sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic form (EF-1-alpha-S)
Length = 462
Score = 373 bits (958), Expect = e-103
Identities = 185/245 (75%), Positives = 209/245 (85%), Gaps = 1/245 (0%)
Frame = +2
Query: 2 GWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRV 181
GW+ITRK E SG TLL+ALD + PP+RPT+KPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GWKITRK-----EGSGSGTTLLEALDCILPPSRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267
Query: 182 ETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCS 361
ETG++KPGMVVTFAP +TTEVKSVEMHHEALTEA+PGDNVGFN+KNVSVK++RRGNV
Sbjct: 268 ETGVIKPGMVVTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAG 327
Query: 362 DSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDL 541
DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRSGK L
Sbjct: 328 DSKNDPPMEAGSFTAQVIILNHPGQIGAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 387
Query: 542 EDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKHTVAVGVIKEVTKNAV- 718
ED PK KSGDA +V ++P KPMCVE+FS+YPPLGRFAVRDM+ TVAVGVIK V K A
Sbjct: 388 EDNPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVEKKAAG 447
Query: 719 EGKVT 733
GKVT
Sbjct: 448 SGKVT 452
>sp|P53013|EF1A_CAEEL Elongation factor 1-alpha (EF-1-alpha)
Length = 463
Score = 372 bits (956), Expect = e-103
Identities = 182/245 (74%), Positives = 211/245 (86%), Gaps = 1/245 (0%)
Frame = +2
Query: 2 GWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRV 181
GW + RK E SGKTLL+ALDS+ PP RPT++PLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GWAVERK-----EGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRV 267
Query: 182 ETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCS 361
ETGI+KPGMVVTFAPQ +TTEVKSVEMHHE+L EA+PGDNVGFN+KNVSVK+IRRG+VCS
Sbjct: 268 ETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCS 327
Query: 362 DSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDL 541
DSK DPA++A F AQVIIMNHPG+I GY+PVLDCHTAHIACKF EL +K+DRR+GK +
Sbjct: 328 DSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKV 387
Query: 542 EDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKHTVAVGVIKEVTK-NAV 718
EDFPK KSGDAG+V L+P+KP+CVE+F++Y PLGRFAVRDM+ TVAVGVIK V K +
Sbjct: 388 EDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGS 447
Query: 719 EGKVT 733
GKVT
Sbjct: 448 SGKVT 452
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,616,070
Number of Sequences: 369166
Number of extensions: 1860295
Number of successful extensions: 6168
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5834
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7357347200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)