Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_C06
(748 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alp... 403 e-112
sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alph... 403 e-112
sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alp... 403 e-112
sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alp... 401 e-112
sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alp... 399 e-111
sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic fo... 399 e-111
sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha) 398 e-111
sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alp... 398 e-110
sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte for... 397 e-110
sp|P28295|EF1A_ABSGL Elongation factor 1-alpha (EF-1-alpha) 396 e-110
>sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62630|EF1A1_RAT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62629|EF1A1_CRIGR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 403 bits (1035), Expect = e-112
Identities = 190/248 (76%), Positives = 215/248 (86%)
Frame = +3
Query: 3 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 182
K+GY PD VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ SG TLL+ALD
Sbjct: 180 KIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGS-----ASGTTLLEALDC 234
Query: 183 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 362
+ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEM
Sbjct: 235 ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEM 294
Query: 363 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 542
HHEAL+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I
Sbjct: 295 HHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQIS 354
Query: 543 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 722
AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+
Sbjct: 355 AGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVES 414
Query: 723 FSEYPPLG 746
FS+YPPLG
Sbjct: 415 FSDYPPLG 422
>sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor Tu)
(EF-Tu)
Length = 462
Score = 403 bits (1035), Expect = e-112
Identities = 189/248 (76%), Positives = 216/248 (87%)
Frame = +3
Query: 3 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 182
K+GY PD VAFVPISGWNGDNM+E S+NMPW+KGW++TRK+ SG TLL+ALD
Sbjct: 180 KIGYNPDTVAFVPISGWNGDNMLEPSSNMPWFKGWKVTRKDGN-----ASGTTLLEALDC 234
Query: 183 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 362
+ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEM
Sbjct: 235 ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEM 294
Query: 363 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 542
HHEAL+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I
Sbjct: 295 HHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQIS 354
Query: 543 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 722
AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVE+
Sbjct: 355 AGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMIPGKPMCVES 414
Query: 723 FSEYPPLG 746
FS+YPPLG
Sbjct: 415 FSDYPPLG 422
>sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q5R1X2|EF1A1_PANTR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68103|EF1A1_BOVIN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68104|EF1A1_HUMAN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q66RN5|EF1A1_FELCA Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 403 bits (1035), Expect = e-112
Identities = 190/248 (76%), Positives = 215/248 (86%)
Frame = +3
Query: 3 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 182
K+GY PD VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ SG TLL+ALD
Sbjct: 180 KIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGN-----ASGTTLLEALDC 234
Query: 183 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 362
+ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEM
Sbjct: 235 ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEM 294
Query: 363 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 542
HHEAL+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I
Sbjct: 295 HHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQIS 354
Query: 543 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 722
AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+
Sbjct: 355 AGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVES 414
Query: 723 FSEYPPLG 746
FS+YPPLG
Sbjct: 415 FSDYPPLG 422
>sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 401 bits (1031), Expect = e-112
Identities = 189/248 (76%), Positives = 215/248 (86%)
Frame = +3
Query: 3 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 182
K+GY PD VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ SG TLL+ALD
Sbjct: 180 KIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGN-----ASGTTLLEALDC 234
Query: 183 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 362
+ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPG+VVTFAP +TTEVKSVEM
Sbjct: 235 ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGVVVTFAPVNVTTEVKSVEM 294
Query: 363 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 542
HHEAL+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I
Sbjct: 295 HHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQIS 354
Query: 543 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 722
AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+
Sbjct: 355 AGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVES 414
Query: 723 FSEYPPLG 746
FS+YPPLG
Sbjct: 415 FSDYPPLG 422
>sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|Q05639|EF1A2_HUMAN Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 399 bits (1025), Expect = e-111
Identities = 188/248 (75%), Positives = 215/248 (86%)
Frame = +3
Query: 3 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 182
K+GY P V FVPISGW+GDNM+E S NMPW+KGW++ RK E SG +LL+ALD+
Sbjct: 180 KIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERK-----EGNASGVSLLEALDT 234
Query: 183 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 362
+ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETGIL+PGMVVTFAP +TTEVKSVEM
Sbjct: 235 ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEM 294
Query: 363 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 542
HHEAL+EALPGDNVGFN+KNVSVK+IRRGNVC DSKSDP ++A F +QVII+NHPG+I
Sbjct: 295 HHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQIS 354
Query: 543 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 722
AGYSPV+DCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+
Sbjct: 355 AGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVES 414
Query: 723 FSEYPPLG 746
FS+YPPLG
Sbjct: 415 FSQYPPLG 422
>sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic form (EF-1-alpha-S)
Length = 462
Score = 399 bits (1025), Expect = e-111
Identities = 189/248 (76%), Positives = 215/248 (86%)
Frame = +3
Query: 3 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 182
K+GY PD VAFVPISGWNGDNM+E S NMPW+KGW+ITRK E SG TLL+ALD
Sbjct: 180 KIGYNPDTVAFVPISGWNGDNMLEPSPNMPWFKGWKITRK-----EGSGSGTTLLEALDC 234
Query: 183 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 362
+ PP+RPT+KPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTFAP +TTEVKSVEM
Sbjct: 235 ILPPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPVNVTTEVKSVEM 294
Query: 363 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 542
HHEALTEA+PGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I
Sbjct: 295 HHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQIG 354
Query: 543 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 722
AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVE+
Sbjct: 355 AGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVES 414
Query: 723 FSEYPPLG 746
FS+YPPLG
Sbjct: 415 FSDYPPLG 422
>sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha)
Length = 464
Score = 398 bits (1023), Expect = e-111
Identities = 186/248 (75%), Positives = 217/248 (87%)
Frame = +3
Query: 3 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 182
K+GY P ++ FVPISG+NGDNM+E S NMPW+KGW + RK E +GKTLL+ALDS
Sbjct: 180 KIGYNPKSIPFVPISGFNGDNMLEPSANMPWFKGWSVERK-----EGTMTGKTLLEALDS 234
Query: 183 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 362
+ PP RPT+KPLRLPLQDVYKIGGIGTVPVGRVETGILKPGM+VTFAPQ LTTEVKSVEM
Sbjct: 235 VVPPQRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMIVTFAPQNLTTEVKSVEM 294
Query: 363 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 542
HHEAL EALPGDNVGFN+KN+S+K+IRRG+V SDSK+DPA++ F AQVIIMNHPG+I
Sbjct: 295 HHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKETKMFTAQVIIMNHPGQIS 354
Query: 543 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 722
AGY+PVLDCHTAHIACKFAEL +K+DRRSGK +ED PK KSGDAG++ L+P+KP+CVET
Sbjct: 355 AGYTPVLDCHTAHIACKFAELKEKVDRRSGKKVEDNPKSLKSGDAGIIDLIPTKPLCVET 414
Query: 723 FSEYPPLG 746
F+EYPPLG
Sbjct: 415 FTEYPPLG 422
>sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|P62632|EF1A2_RAT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 398 bits (1022), Expect = e-110
Identities = 187/248 (75%), Positives = 215/248 (86%)
Frame = +3
Query: 3 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 182
K+GY P V FVPISGW+GDNM+E S NMPW+KGW++ RK E SG +LL+ALD+
Sbjct: 180 KIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERK-----EGNASGVSLLEALDT 234
Query: 183 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 362
+ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETGIL+PGMVVTFAP +TTEVKSVEM
Sbjct: 235 ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEM 294
Query: 363 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 542
HHEAL+EALPGDNVGFN+KNVSVK+IRRGNVC DSK+DP ++A F +QVII+NHPG+I
Sbjct: 295 HHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILNHPGQIS 354
Query: 543 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 722
AGYSPV+DCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+
Sbjct: 355 AGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVES 414
Query: 723 FSEYPPLG 746
FS+YPPLG
Sbjct: 415 FSQYPPLG 422
>sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1) (EF-1AO1)
Length = 461
Score = 397 bits (1021), Expect = e-110
Identities = 189/248 (76%), Positives = 211/248 (85%)
Frame = +3
Query: 3 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 182
K+GY P V FVPISGW+GDNM+E STNMPW+KGW+I RK E SG TLL+ALD
Sbjct: 180 KIGYNPATVPFVPISGWHGDNMLEASTNMPWFKGWKIERK-----EGNASGITLLEALDC 234
Query: 183 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 362
+ PP RPTNKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGM+VTFAP +TTEVKSVEM
Sbjct: 235 IIPPQRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPSNVTTEVKSVEM 294
Query: 363 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 542
HHEAL EALPGDNVGFN+KN+SVK+IRRGNV DSK+DP QA F AQVII+NHPG+I
Sbjct: 295 HHEALVEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQAGSFTAQVIILNHPGQIS 354
Query: 543 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 722
AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVET
Sbjct: 355 AGYAPVLDCHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKSGDAAIVEMIPGKPMCVET 414
Query: 723 FSEYPPLG 746
FS+YPPLG
Sbjct: 415 FSDYPPLG 422
>sp|P28295|EF1A_ABSGL Elongation factor 1-alpha (EF-1-alpha)
Length = 458
Score = 396 bits (1017), Expect = e-110
Identities = 183/248 (73%), Positives = 216/248 (87%)
Frame = +3
Query: 3 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 182
K+G+ P +V FVPISGW+GDNM+EESTNMPWYKGW K K SGKTLLDA+D+
Sbjct: 178 KIGFNPKSVPFVPISGWHGDNMLEESTNMPWYKGWNKETKAGAK-----SGKTLLDAIDA 232
Query: 183 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 362
++PP RP++KPLRLPLQDVYKIGGIGTVPVGRVETG++K GMVVTFAP +TTEVKSVEM
Sbjct: 233 IDPPQRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVTFAPANVTTEVKSVEM 292
Query: 363 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 542
HHE L E LPGDNVGFN+KNVSVK+IRRGNVCSDSK+DPA++A F AQVI++NHPG+I
Sbjct: 293 HHEQLVEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKEAGSFTAQVIVLNHPGQIG 352
Query: 543 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 722
AGY+PVLDCHTAHIACKFAEL++KIDRRSGK LED PK KSGD+ +V+++PSKPMCVE
Sbjct: 353 AGYAPVLDCHTAHIACKFAELLEKIDRRSGKKLEDAPKFVKSGDSAIVKMIPSKPMCVEA 412
Query: 723 FSEYPPLG 746
+++YPPLG
Sbjct: 413 YTDYPPLG 420
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,364,014
Number of Sequences: 369166
Number of extensions: 1902646
Number of successful extensions: 6422
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6072
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6776504000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)