Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_E21
(706 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alp... 354 1e-97
sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alp... 353 2e-97
sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha) 353 3e-97
sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte for... 350 3e-96
sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alp... 347 1e-95
sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alp... 347 1e-95
sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alph... 347 2e-95
sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alp... 346 4e-95
sp|P41745|EF1A_ARXAD Elongation factor 1-alpha (EF-1-alpha) 345 5e-95
sp|P28295|EF1A_ABSGL Elongation factor 1-alpha (EF-1-alpha) 345 5e-95
>sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|Q05639|EF1A2_HUMAN Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 354 bits (909), Expect = 1e-97
Identities = 168/202 (83%), Positives = 186/202 (92%)
Frame = +2
Query: 11 PPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHH 190
PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETGIL+PGMVVTFAP +TTEVKSVEMHH
Sbjct: 237 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHH 296
Query: 191 EALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAG 370
EAL+EALPGDNVGFN+KNVSVK+IRRGNVC DSKSDP ++A F +QVII+NHPG+I AG
Sbjct: 297 EALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAG 356
Query: 371 YSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFS 550
YSPV+DCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS
Sbjct: 357 YSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFS 416
Query: 551 EYPPLGRFAVRDMKQTVAVGVI 616
+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 417 QYPPLGRFAVRDMRQTVAVGVI 438
>sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|P62632|EF1A2_RAT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 353 bits (906), Expect = 2e-97
Identities = 167/202 (82%), Positives = 186/202 (92%)
Frame = +2
Query: 11 PPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHH 190
PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETGIL+PGMVVTFAP +TTEVKSVEMHH
Sbjct: 237 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHH 296
Query: 191 EALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAG 370
EAL+EALPGDNVGFN+KNVSVK+IRRGNVC DSK+DP ++A F +QVII+NHPG+I AG
Sbjct: 297 EALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILNHPGQISAG 356
Query: 371 YSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFS 550
YSPV+DCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS
Sbjct: 357 YSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFS 416
Query: 551 EYPPLGRFAVRDMKQTVAVGVI 616
+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 417 QYPPLGRFAVRDMRQTVAVGVI 438
>sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha)
Length = 464
Score = 353 bits (905), Expect = 3e-97
Identities = 166/205 (80%), Positives = 189/205 (92%)
Frame = +2
Query: 2 SLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVE 181
S+ PP RPT+KPLRLPLQDVYKIGGIGTVPVGRVETGILKPGM+VTFAPQ LTTEVKSVE
Sbjct: 234 SVVPPQRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMIVTFAPQNLTTEVKSVE 293
Query: 182 MHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEI 361
MHHEAL EALPGDNVGFN+KN+S+K+IRRG+V SDSK+DPA++ F AQVIIMNHPG+I
Sbjct: 294 MHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKETKMFTAQVIIMNHPGQI 353
Query: 362 HAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVE 541
AGY+PVLDCHTAHIACKFAEL +K+DRRSGK +ED PK KSGDAG++ L+P+KP+CVE
Sbjct: 354 SAGYTPVLDCHTAHIACKFAELKEKVDRRSGKKVEDNPKSLKSGDAGIIDLIPTKPLCVE 413
Query: 542 TFSEYPPLGRFAVRDMKQTVAVGVI 616
TF+EYPPLGRFAVRDM+QTVAVGVI
Sbjct: 414 TFTEYPPLGRFAVRDMRQTVAVGVI 438
>sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1) (EF-1AO1)
Length = 461
Score = 350 bits (897), Expect = 3e-96
Identities = 166/202 (82%), Positives = 182/202 (90%)
Frame = +2
Query: 11 PPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHH 190
PP RPTNKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGM+VTFAP +TTEVKSVEMHH
Sbjct: 237 PPQRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPSNVTTEVKSVEMHH 296
Query: 191 EALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAG 370
EAL EALPGDNVGFN+KN+SVK+IRRGNV DSK+DP QA F AQVII+NHPG+I AG
Sbjct: 297 EALVEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQAGSFTAQVIILNHPGQISAG 356
Query: 371 YSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFS 550
Y+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVETFS
Sbjct: 357 YAPVLDCHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKSGDAAIVEMIPGKPMCVETFS 416
Query: 551 EYPPLGRFAVRDMKQTVAVGVI 616
+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 417 DYPPLGRFAVRDMRQTVAVGVI 438
>sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62630|EF1A1_RAT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62629|EF1A1_CRIGR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 347 bits (891), Expect = 1e-95
Identities = 166/202 (82%), Positives = 184/202 (91%)
Frame = +2
Query: 11 PPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHH 190
PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEMHH
Sbjct: 237 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHH 296
Query: 191 EALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAG 370
EAL+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AG
Sbjct: 297 EALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAG 356
Query: 371 YSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFS 550
Y+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS
Sbjct: 357 YAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFS 416
Query: 551 EYPPLGRFAVRDMKQTVAVGVI 616
+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 417 DYPPLGRFAVRDMRQTVAVGVI 438
>sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q5R1X2|EF1A1_PANTR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68103|EF1A1_BOVIN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68104|EF1A1_HUMAN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q66RN5|EF1A1_FELCA Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 347 bits (891), Expect = 1e-95
Identities = 166/202 (82%), Positives = 184/202 (91%)
Frame = +2
Query: 11 PPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHH 190
PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEMHH
Sbjct: 237 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHH 296
Query: 191 EALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAG 370
EAL+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AG
Sbjct: 297 EALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAG 356
Query: 371 YSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFS 550
Y+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS
Sbjct: 357 YAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFS 416
Query: 551 EYPPLGRFAVRDMKQTVAVGVI 616
+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 417 DYPPLGRFAVRDMRQTVAVGVI 438
>sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor Tu)
(EF-Tu)
Length = 462
Score = 347 bits (890), Expect = 2e-95
Identities = 165/202 (81%), Positives = 184/202 (91%)
Frame = +2
Query: 11 PPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHH 190
PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEMHH
Sbjct: 237 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHH 296
Query: 191 EALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAG 370
EAL+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AG
Sbjct: 297 EALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAG 356
Query: 371 YSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFS 550
Y+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVE+FS
Sbjct: 357 YAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMIPGKPMCVESFS 416
Query: 551 EYPPLGRFAVRDMKQTVAVGVI 616
+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 417 DYPPLGRFAVRDMRQTVAVGVI 438
>sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 346 bits (887), Expect = 4e-95
Identities = 165/202 (81%), Positives = 184/202 (91%)
Frame = +2
Query: 11 PPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHH 190
PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPG+VVTFAP +TTEVKSVEMHH
Sbjct: 237 PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGVVVTFAPVNVTTEVKSVEMHH 296
Query: 191 EALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAG 370
EAL+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AG
Sbjct: 297 EALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAG 356
Query: 371 YSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFS 550
Y+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS
Sbjct: 357 YAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFS 416
Query: 551 EYPPLGRFAVRDMKQTVAVGVI 616
+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 417 DYPPLGRFAVRDMRQTVAVGVI 438
>sp|P41745|EF1A_ARXAD Elongation factor 1-alpha (EF-1-alpha)
Length = 459
Score = 345 bits (886), Expect = 5e-95
Identities = 163/205 (79%), Positives = 185/205 (90%)
Frame = +2
Query: 2 SLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVE 181
+++PPTRP++KPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTFAP G+TTEVKSVE
Sbjct: 232 AVDPPTRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPAGVTTEVKSVE 291
Query: 182 MHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEI 361
MHHE L E LPGDNVGFN+KNVSVKEIRRGNV DSK+DP + F AQVII NHPG+I
Sbjct: 292 MHHEQLPEGLPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPKGCDSFTAQVIIFNHPGQI 351
Query: 362 HAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVE 541
AGYSPVLDCHTAHIAC+F EL++KIDRRSGK +ED PK K+GDA +VR++PSKPMCVE
Sbjct: 352 SAGYSPVLDCHTAHIACRFDELIEKIDRRSGKKVEDSPKFVKAGDAAIVRMIPSKPMCVE 411
Query: 542 TFSEYPPLGRFAVRDMKQTVAVGVI 616
TF+EYPPLGRFAVRDM+QTVAVGVI
Sbjct: 412 TFTEYPPLGRFAVRDMRQTVAVGVI 436
>sp|P28295|EF1A_ABSGL Elongation factor 1-alpha (EF-1-alpha)
Length = 458
Score = 345 bits (886), Expect = 5e-95
Identities = 160/205 (78%), Positives = 188/205 (91%)
Frame = +2
Query: 2 SLEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVE 181
+++PP RP++KPLRLPLQDVYKIGGIGTVPVGRVETG++K GMVVTFAP +TTEVKSVE
Sbjct: 232 AIDPPQRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVTFAPANVTTEVKSVE 291
Query: 182 MHHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEI 361
MHHE L E LPGDNVGFN+KNVSVK+IRRGNVCSDSK+DPA++A F AQVI++NHPG+I
Sbjct: 292 MHHEQLVEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKEAGSFTAQVIVLNHPGQI 351
Query: 362 HAGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVE 541
AGY+PVLDCHTAHIACKFAEL++KIDRRSGK LED PK KSGD+ +V+++PSKPMCVE
Sbjct: 352 GAGYAPVLDCHTAHIACKFAELLEKIDRRSGKKLEDAPKFVKSGDSAIVKMIPSKPMCVE 411
Query: 542 TFSEYPPLGRFAVRDMKQTVAVGVI 616
+++YPPLGRFAVRDM+QTVAVGVI
Sbjct: 412 AYTDYPPLGRFAVRDMRQTVAVGVI 436
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,892,951
Number of Sequences: 369166
Number of extensions: 1643155
Number of successful extensions: 5499
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5205
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6170718545
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)