Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_C14
(768 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alp... 417 e-116
sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alph... 417 e-116
sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alp... 417 e-116
sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alp... 416 e-116
sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alp... 413 e-115
sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic fo... 413 e-115
sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha) 412 e-115
sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alp... 412 e-115
sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte for... 412 e-115
sp|P28295|EF1A_ABSGL Elongation factor 1-alpha (EF-1-alpha) 410 e-114
>sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62630|EF1A1_RAT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62629|EF1A1_CRIGR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 417 bits (1072), Expect = e-116
Identities = 197/256 (76%), Positives = 223/256 (87%)
Frame = +1
Query: 1 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 180
K+GY PD VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ SG TLL+ALD
Sbjct: 180 KIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGS-----ASGTTLLEALDC 234
Query: 181 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 360
+ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEM
Sbjct: 235 ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEM 294
Query: 361 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 540
HHEAL+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I
Sbjct: 295 HHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQIS 354
Query: 541 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 720
AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+
Sbjct: 355 AGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVES 414
Query: 721 FSEYPPLGRFAVRDMK 768
FS+YPPLGRFAVRDM+
Sbjct: 415 FSDYPPLGRFAVRDMR 430
>sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor Tu)
(EF-Tu)
Length = 462
Score = 417 bits (1072), Expect = e-116
Identities = 196/256 (76%), Positives = 224/256 (87%)
Frame = +1
Query: 1 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 180
K+GY PD VAFVPISGWNGDNM+E S+NMPW+KGW++TRK+ SG TLL+ALD
Sbjct: 180 KIGYNPDTVAFVPISGWNGDNMLEPSSNMPWFKGWKVTRKDGN-----ASGTTLLEALDC 234
Query: 181 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 360
+ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEM
Sbjct: 235 ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEM 294
Query: 361 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 540
HHEAL+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I
Sbjct: 295 HHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQIS 354
Query: 541 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 720
AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVE+
Sbjct: 355 AGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMIPGKPMCVES 414
Query: 721 FSEYPPLGRFAVRDMK 768
FS+YPPLGRFAVRDM+
Sbjct: 415 FSDYPPLGRFAVRDMR 430
>sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q5R1X2|EF1A1_PANTR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68103|EF1A1_BOVIN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68104|EF1A1_HUMAN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q66RN5|EF1A1_FELCA Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 417 bits (1072), Expect = e-116
Identities = 197/256 (76%), Positives = 223/256 (87%)
Frame = +1
Query: 1 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 180
K+GY PD VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ SG TLL+ALD
Sbjct: 180 KIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGN-----ASGTTLLEALDC 234
Query: 181 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 360
+ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEM
Sbjct: 235 ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEM 294
Query: 361 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 540
HHEAL+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I
Sbjct: 295 HHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQIS 354
Query: 541 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 720
AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+
Sbjct: 355 AGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVES 414
Query: 721 FSEYPPLGRFAVRDMK 768
FS+YPPLGRFAVRDM+
Sbjct: 415 FSDYPPLGRFAVRDMR 430
>sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 416 bits (1068), Expect = e-116
Identities = 196/256 (76%), Positives = 223/256 (87%)
Frame = +1
Query: 1 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 180
K+GY PD VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ SG TLL+ALD
Sbjct: 180 KIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGN-----ASGTTLLEALDC 234
Query: 181 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 360
+ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPG+VVTFAP +TTEVKSVEM
Sbjct: 235 ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGVVVTFAPVNVTTEVKSVEM 294
Query: 361 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 540
HHEAL+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I
Sbjct: 295 HHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQIS 354
Query: 541 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 720
AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+
Sbjct: 355 AGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVES 414
Query: 721 FSEYPPLGRFAVRDMK 768
FS+YPPLGRFAVRDM+
Sbjct: 415 FSDYPPLGRFAVRDMR 430
>sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|Q05639|EF1A2_HUMAN Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 413 bits (1062), Expect = e-115
Identities = 195/256 (76%), Positives = 223/256 (87%)
Frame = +1
Query: 1 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 180
K+GY P V FVPISGW+GDNM+E S NMPW+KGW++ RK E SG +LL+ALD+
Sbjct: 180 KIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERK-----EGNASGVSLLEALDT 234
Query: 181 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 360
+ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETGIL+PGMVVTFAP +TTEVKSVEM
Sbjct: 235 ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEM 294
Query: 361 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 540
HHEAL+EALPGDNVGFN+KNVSVK+IRRGNVC DSKSDP ++A F +QVII+NHPG+I
Sbjct: 295 HHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQIS 354
Query: 541 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 720
AGYSPV+DCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+
Sbjct: 355 AGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVES 414
Query: 721 FSEYPPLGRFAVRDMK 768
FS+YPPLGRFAVRDM+
Sbjct: 415 FSQYPPLGRFAVRDMR 430
>sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic form (EF-1-alpha-S)
Length = 462
Score = 413 bits (1062), Expect = e-115
Identities = 196/256 (76%), Positives = 223/256 (87%)
Frame = +1
Query: 1 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 180
K+GY PD VAFVPISGWNGDNM+E S NMPW+KGW+ITRK E SG TLL+ALD
Sbjct: 180 KIGYNPDTVAFVPISGWNGDNMLEPSPNMPWFKGWKITRK-----EGSGSGTTLLEALDC 234
Query: 181 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 360
+ PP+RPT+KPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTFAP +TTEVKSVEM
Sbjct: 235 ILPPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPVNVTTEVKSVEM 294
Query: 361 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 540
HHEALTEA+PGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I
Sbjct: 295 HHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQIG 354
Query: 541 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 720
AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVE+
Sbjct: 355 AGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVES 414
Query: 721 FSEYPPLGRFAVRDMK 768
FS+YPPLGRFAVRDM+
Sbjct: 415 FSDYPPLGRFAVRDMR 430
>sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha)
Length = 464
Score = 412 bits (1060), Expect = e-115
Identities = 193/256 (75%), Positives = 225/256 (87%)
Frame = +1
Query: 1 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 180
K+GY P ++ FVPISG+NGDNM+E S NMPW+KGW + RK E +GKTLL+ALDS
Sbjct: 180 KIGYNPKSIPFVPISGFNGDNMLEPSANMPWFKGWSVERK-----EGTMTGKTLLEALDS 234
Query: 181 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 360
+ PP RPT+KPLRLPLQDVYKIGGIGTVPVGRVETGILKPGM+VTFAPQ LTTEVKSVEM
Sbjct: 235 VVPPQRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMIVTFAPQNLTTEVKSVEM 294
Query: 361 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 540
HHEAL EALPGDNVGFN+KN+S+K+IRRG+V SDSK+DPA++ F AQVIIMNHPG+I
Sbjct: 295 HHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKETKMFTAQVIIMNHPGQIS 354
Query: 541 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 720
AGY+PVLDCHTAHIACKFAEL +K+DRRSGK +ED PK KSGDAG++ L+P+KP+CVET
Sbjct: 355 AGYTPVLDCHTAHIACKFAELKEKVDRRSGKKVEDNPKSLKSGDAGIIDLIPTKPLCVET 414
Query: 721 FSEYPPLGRFAVRDMK 768
F+EYPPLGRFAVRDM+
Sbjct: 415 FTEYPPLGRFAVRDMR 430
>sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|P62632|EF1A2_RAT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 412 bits (1059), Expect = e-115
Identities = 194/256 (75%), Positives = 223/256 (87%)
Frame = +1
Query: 1 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 180
K+GY P V FVPISGW+GDNM+E S NMPW+KGW++ RK E SG +LL+ALD+
Sbjct: 180 KIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERK-----EGNASGVSLLEALDT 234
Query: 181 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 360
+ PPTRPT+KPLRLPLQDVYKIGGIGTVPVGRVETGIL+PGMVVTFAP +TTEVKSVEM
Sbjct: 235 ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEM 294
Query: 361 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 540
HHEAL+EALPGDNVGFN+KNVSVK+IRRGNVC DSK+DP ++A F +QVII+NHPG+I
Sbjct: 295 HHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILNHPGQIS 354
Query: 541 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 720
AGYSPV+DCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+
Sbjct: 355 AGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVES 414
Query: 721 FSEYPPLGRFAVRDMK 768
FS+YPPLGRFAVRDM+
Sbjct: 415 FSQYPPLGRFAVRDMR 430
>sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1) (EF-1AO1)
Length = 461
Score = 412 bits (1058), Expect = e-115
Identities = 196/256 (76%), Positives = 219/256 (85%)
Frame = +1
Query: 1 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 180
K+GY P V FVPISGW+GDNM+E STNMPW+KGW+I RK E SG TLL+ALD
Sbjct: 180 KIGYNPATVPFVPISGWHGDNMLEASTNMPWFKGWKIERK-----EGNASGITLLEALDC 234
Query: 181 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 360
+ PP RPTNKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGM+VTFAP +TTEVKSVEM
Sbjct: 235 IIPPQRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPSNVTTEVKSVEM 294
Query: 361 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 540
HHEAL EALPGDNVGFN+KN+SVK+IRRGNV DSK+DP QA F AQVII+NHPG+I
Sbjct: 295 HHEALVEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQAGSFTAQVIILNHPGQIS 354
Query: 541 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 720
AGY+PVLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVET
Sbjct: 355 AGYAPVLDCHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKSGDAAIVEMIPGKPMCVET 414
Query: 721 FSEYPPLGRFAVRDMK 768
FS+YPPLGRFAVRDM+
Sbjct: 415 FSDYPPLGRFAVRDMR 430
>sp|P28295|EF1A_ABSGL Elongation factor 1-alpha (EF-1-alpha)
Length = 458
Score = 410 bits (1054), Expect = e-114
Identities = 190/256 (74%), Positives = 224/256 (87%)
Frame = +1
Query: 1 KVGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDS 180
K+G+ P +V FVPISGW+GDNM+EESTNMPWYKGW K K SGKTLLDA+D+
Sbjct: 178 KIGFNPKSVPFVPISGWHGDNMLEESTNMPWYKGWNKETKAGAK-----SGKTLLDAIDA 232
Query: 181 LEPPTRPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEM 360
++PP RP++KPLRLPLQDVYKIGGIGTVPVGRVETG++K GMVVTFAP +TTEVKSVEM
Sbjct: 233 IDPPQRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVTFAPANVTTEVKSVEM 292
Query: 361 HHEALTEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIH 540
HHE L E LPGDNVGFN+KNVSVK+IRRGNVCSDSK+DPA++A F AQVI++NHPG+I
Sbjct: 293 HHEQLVEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKEAGSFTAQVIVLNHPGQIG 352
Query: 541 AGYSPVLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVET 720
AGY+PVLDCHTAHIACKFAEL++KIDRRSGK LED PK KSGD+ +V+++PSKPMCVE
Sbjct: 353 AGYAPVLDCHTAHIACKFAELLEKIDRRSGKKLEDAPKFVKSGDSAIVKMIPSKPMCVEA 412
Query: 721 FSEYPPLGRFAVRDMK 768
+++YPPLGRFAVRDM+
Sbjct: 413 YTDYPPLGRFAVRDMR 428
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.316 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,531,520
Number of Sequences: 369166
Number of extensions: 1959545
Number of successful extensions: 6612
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6261
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7115329200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)