Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_L17
(798 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alp... 377 e-104
sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alp... 376 e-104
sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha) 375 e-104
sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alp... 371 e-102
sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alp... 371 e-102
sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alph... 371 e-102
sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte for... 371 e-102
sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic fo... 370 e-102
sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alp... 370 e-102
sp|P53013|EF1A_CAEEL Elongation factor 1-alpha (EF-1-alpha) 369 e-102
>sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|Q05639|EF1A2_HUMAN Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 377 bits (969), Expect = e-104
Identities = 182/239 (76%), Positives = 207/239 (86%)
Frame = +1
Query: 16 APTCPGINGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGI 195
+P P GW++ RK E SG +LL+ALD++ PPTRPT+KPLRLPLQDVYKIGGI
Sbjct: 205 SPNMPWFKGWKVERK-----EGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGI 259
Query: 196 GTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKE 375
GTVPVGRVETGIL+PGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK+
Sbjct: 260 GTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKD 319
Query: 376 IRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKI 555
IRRGNVC DSKSDP ++A F +QVII+NHPG+I AGYSPV+DCHTAHIACKFAEL +KI
Sbjct: 320 IRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKI 379
Query: 556 DRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 732
DRRSGK LED PK KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 380 DRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVI 438
>sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|P62632|EF1A2_RAT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 376 bits (966), Expect = e-104
Identities = 181/239 (75%), Positives = 207/239 (86%)
Frame = +1
Query: 16 APTCPGINGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGI 195
+P P GW++ RK E SG +LL+ALD++ PPTRPT+KPLRLPLQDVYKIGGI
Sbjct: 205 SPNMPWFKGWKVERK-----EGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGI 259
Query: 196 GTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKE 375
GTVPVGRVETGIL+PGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK+
Sbjct: 260 GTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKD 319
Query: 376 IRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKI 555
IRRGNVC DSK+DP ++A F +QVII+NHPG+I AGYSPV+DCHTAHIACKFAEL +KI
Sbjct: 320 IRRGNVCGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKI 379
Query: 556 DRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 732
DRRSGK LED PK KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 380 DRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVI 438
>sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha)
Length = 464
Score = 375 bits (963), Expect = e-104
Identities = 180/235 (76%), Positives = 206/235 (87%)
Frame = +1
Query: 28 PGINGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVP 207
P GW + RK E +GKTLL+ALDS+ PP RPT+KPLRLPLQDVYKIGGIGTVP
Sbjct: 209 PWFKGWSVERK-----EGTMTGKTLLEALDSVVPPQRPTDKPLRLPLQDVYKIGGIGTVP 263
Query: 208 VGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRG 387
VGRVETGILKPGM+VTFAPQ LTTEVKSVEMHHEAL EALPGDNVGFN+KN+S+K+IRRG
Sbjct: 264 VGRVETGILKPGMIVTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRG 323
Query: 388 NVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRS 567
+V SDSK+DPA++ F AQVIIMNHPG+I AGY+PVLDCHTAHIACKFAEL +K+DRRS
Sbjct: 324 SVASDSKNDPAKETKMFTAQVIIMNHPGQISAGYTPVLDCHTAHIACKFAELKEKVDRRS 383
Query: 568 GKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 732
GK +ED PK KSGDAG++ L+P+KP+CVETF+EYPPLGRFAVRDM+QTVAVGVI
Sbjct: 384 GKKVEDNPKSLKSGDAGIIDLIPTKPLCVETFTEYPPLGRFAVRDMRQTVAVGVI 438
>sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62630|EF1A1_RAT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62629|EF1A1_CRIGR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 371 bits (953), Expect = e-102
Identities = 180/235 (76%), Positives = 203/235 (86%)
Frame = +1
Query: 28 PGINGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVP 207
P GW++TRK+ SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVP
Sbjct: 209 PWFKGWKVTRKDGS-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVP 263
Query: 208 VGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRG 387
VGRVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRG
Sbjct: 264 VGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRG 323
Query: 388 NVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRS 567
NV DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRS
Sbjct: 324 NVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRS 383
Query: 568 GKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 732
GK LED PK KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 384 GKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438
>sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q5R1X2|EF1A1_PANTR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68103|EF1A1_BOVIN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68104|EF1A1_HUMAN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q66RN5|EF1A1_FELCA Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 371 bits (953), Expect = e-102
Identities = 180/235 (76%), Positives = 203/235 (86%)
Frame = +1
Query: 28 PGINGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVP 207
P GW++TRK+ SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVP
Sbjct: 209 PWFKGWKVTRKDGN-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVP 263
Query: 208 VGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRG 387
VGRVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRG
Sbjct: 264 VGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRG 323
Query: 388 NVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRS 567
NV DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRS
Sbjct: 324 NVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRS 383
Query: 568 GKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 732
GK LED PK KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 384 GKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438
>sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor Tu)
(EF-Tu)
Length = 462
Score = 371 bits (952), Expect = e-102
Identities = 179/235 (76%), Positives = 203/235 (86%)
Frame = +1
Query: 28 PGINGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVP 207
P GW++TRK+ SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVP
Sbjct: 209 PWFKGWKVTRKDGN-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVP 263
Query: 208 VGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRG 387
VGRVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRG
Sbjct: 264 VGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRG 323
Query: 388 NVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRS 567
NV DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRS
Sbjct: 324 NVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRS 383
Query: 568 GKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 732
GK LED PK KSGDA +V ++P KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 384 GKKLEDGPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438
>sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1) (EF-1AO1)
Length = 461
Score = 371 bits (952), Expect = e-102
Identities = 181/235 (77%), Positives = 200/235 (85%)
Frame = +1
Query: 28 PGINGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVP 207
P GW+I RK E SG TLL+ALD + PP RPTNKPLRLPLQDVYKIGGIGTVP
Sbjct: 209 PWFKGWKIERK-----EGNASGITLLEALDCIIPPQRPTNKPLRLPLQDVYKIGGIGTVP 263
Query: 208 VGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRG 387
VGRVETG+LKPGM+VTFAP +TTEVKSVEMHHEAL EALPGDNVGFN+KN+SVK+IRRG
Sbjct: 264 VGRVETGVLKPGMIVTFAPSNVTTEVKSVEMHHEALVEALPGDNVGFNVKNISVKDIRRG 323
Query: 388 NVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRS 567
NV DSK+DP QA F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRS
Sbjct: 324 NVAGDSKNDPPMQAGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRS 383
Query: 568 GKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 732
GK LED PK KSGDA +V ++P KPMCVETFS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 384 GKKLEDDPKFLKSGDAAIVEMIPGKPMCVETFSDYPPLGRFAVRDMRQTVAVGVI 438
>sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic form (EF-1-alpha-S)
Length = 462
Score = 370 bits (951), Expect = e-102
Identities = 180/239 (75%), Positives = 205/239 (85%)
Frame = +1
Query: 16 APTCPGINGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGI 195
+P P GW+ITRK E SG TLL+ALD + PP+RPT+KPLRLPLQDVYKIGGI
Sbjct: 205 SPNMPWFKGWKITRK-----EGSGSGTTLLEALDCILPPSRPTDKPLRLPLQDVYKIGGI 259
Query: 196 GTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKE 375
GTVPVGRVETG++KPGMVVTFAP +TTEVKSVEMHHEALTEA+PGDNVGFN+KNVSVK+
Sbjct: 260 GTVPVGRVETGVIKPGMVVTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKD 319
Query: 376 IRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKI 555
+RRGNV DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KI
Sbjct: 320 VRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQIGAGYAPVLDCHTAHIACKFAELKEKI 379
Query: 556 DRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 732
DRRSGK LED PK KSGDA +V ++P KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 380 DRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438
>sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 370 bits (949), Expect = e-102
Identities = 179/235 (76%), Positives = 203/235 (86%)
Frame = +1
Query: 28 PGINGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVP 207
P GW++TRK+ SG TLL+ALD + PPTRPT+KPLRLPLQDVYKIGGIGTVP
Sbjct: 209 PWFKGWKVTRKDGN-----ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVP 263
Query: 208 VGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRG 387
VGRVETG+LKPG+VVTFAP +TTEVKSVEMHHEAL+EALPGDNVGFN+KNVSVK++RRG
Sbjct: 264 VGRVETGVLKPGVVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRG 323
Query: 388 NVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRS 567
NV DSK+DP +A F AQVII+NHPG+I AGY+PVLDCHTAHIACKFAEL +KIDRRS
Sbjct: 324 NVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRS 383
Query: 568 GKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 732
GK LED PK KSGDA +V +VP KPMCVE+FS+YPPLGRFAVRDM+QTVAVGVI
Sbjct: 384 GKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVI 438
>sp|P53013|EF1A_CAEEL Elongation factor 1-alpha (EF-1-alpha)
Length = 463
Score = 369 bits (946), Expect = e-102
Identities = 177/235 (75%), Positives = 205/235 (87%)
Frame = +1
Query: 28 PGINGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPTNKPLRLPLQDVYKIGGIGTVP 207
P GW + RK E SGKTLL+ALDS+ PP RPT++PLRLPLQDVYKIGGIGTVP
Sbjct: 209 PWFKGWAVERK-----EGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVP 263
Query: 208 VGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGFNIKNVSVKEIRRG 387
VGRVETGI+KPGMVVTFAPQ +TTEVKSVEMHHE+L EA+PGDNVGFN+KNVSVK+IRRG
Sbjct: 264 VGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRG 323
Query: 388 NVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLDCHTAHIACKFAELMKKIDRRS 567
+VCSDSK DPA++A F AQVIIMNHPG+I GY+PVLDCHTAHIACKF EL +K+DRR+
Sbjct: 324 SVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRT 383
Query: 568 GKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLGRFAVRDMKQTVAVGVI 732
GK +EDFPK KSGDAG+V L+P+KP+CVE+F++Y PLGRFAVRDM+QTVAVGVI
Sbjct: 384 GKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVI 438
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,996,422
Number of Sequences: 369166
Number of extensions: 1912677
Number of successful extensions: 6588
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6278
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7522142940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)