Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_I05
(871 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alp... 423 e-118
sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alph... 423 e-118
sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alp... 423 e-118
sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alp... 421 e-117
sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alp... 419 e-117
sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic fo... 419 e-117
sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha) 418 e-117
sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alp... 418 e-116
sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte for... 417 e-116
sp|P28295|EF1A_ABSGL Elongation factor 1-alpha (EF-1-alpha) 417 e-116
>sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62630|EF1A1_RAT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62629|EF1A1_CRIGR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 423 bits (1087), Expect = e-118
Identities = 202/259 (77%), Positives = 227/259 (87%)
Frame = +3
Query: 6 PDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPT 185
PD VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ SG TLL+ALD + PPT
Sbjct: 185 PDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGS-----ASGTTLLEALDCILPPT 239
Query: 186 RPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEAL 365
RPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL
Sbjct: 240 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEAL 299
Query: 366 TEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSP 545
+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AGY+P
Sbjct: 300 SEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAP 359
Query: 546 VLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYP 725
VLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS+YP
Sbjct: 360 VLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYP 419
Query: 726 PLGRFAVRDMKQTVAVGVI 782
PLGRFAVRDM+QTVAVGVI
Sbjct: 420 PLGRFAVRDMRQTVAVGVI 438
>sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor Tu)
(EF-Tu)
Length = 462
Score = 423 bits (1087), Expect = e-118
Identities = 201/259 (77%), Positives = 228/259 (88%)
Frame = +3
Query: 6 PDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPT 185
PD VAFVPISGWNGDNM+E S+NMPW+KGW++TRK+ SG TLL+ALD + PPT
Sbjct: 185 PDTVAFVPISGWNGDNMLEPSSNMPWFKGWKVTRKDGN-----ASGTTLLEALDCILPPT 239
Query: 186 RPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEAL 365
RPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL
Sbjct: 240 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEAL 299
Query: 366 TEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSP 545
+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AGY+P
Sbjct: 300 SEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAP 359
Query: 546 VLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYP 725
VLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVE+FS+YP
Sbjct: 360 VLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMIPGKPMCVESFSDYP 419
Query: 726 PLGRFAVRDMKQTVAVGVI 782
PLGRFAVRDM+QTVAVGVI
Sbjct: 420 PLGRFAVRDMRQTVAVGVI 438
>sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q5R1X2|EF1A1_PANTR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68103|EF1A1_BOVIN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68104|EF1A1_HUMAN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q66RN5|EF1A1_FELCA Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 423 bits (1087), Expect = e-118
Identities = 202/259 (77%), Positives = 227/259 (87%)
Frame = +3
Query: 6 PDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPT 185
PD VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ SG TLL+ALD + PPT
Sbjct: 185 PDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGN-----ASGTTLLEALDCILPPT 239
Query: 186 RPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEAL 365
RPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL
Sbjct: 240 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEAL 299
Query: 366 TEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSP 545
+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AGY+P
Sbjct: 300 SEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAP 359
Query: 546 VLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYP 725
VLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS+YP
Sbjct: 360 VLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYP 419
Query: 726 PLGRFAVRDMKQTVAVGVI 782
PLGRFAVRDM+QTVAVGVI
Sbjct: 420 PLGRFAVRDMRQTVAVGVI 438
>sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 421 bits (1083), Expect = e-117
Identities = 201/259 (77%), Positives = 227/259 (87%)
Frame = +3
Query: 6 PDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPT 185
PD VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ SG TLL+ALD + PPT
Sbjct: 185 PDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGN-----ASGTTLLEALDCILPPT 239
Query: 186 RPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEAL 365
RPT+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPG+VVTFAP +TTEVKSVEMHHEAL
Sbjct: 240 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGVVVTFAPVNVTTEVKSVEMHHEAL 299
Query: 366 TEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSP 545
+EALPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AGY+P
Sbjct: 300 SEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAP 359
Query: 546 VLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYP 725
VLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS+YP
Sbjct: 360 VLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYP 419
Query: 726 PLGRFAVRDMKQTVAVGVI 782
PLGRFAVRDM+QTVAVGVI
Sbjct: 420 PLGRFAVRDMRQTVAVGVI 438
>sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|Q05639|EF1A2_HUMAN Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 419 bits (1077), Expect = e-117
Identities = 200/259 (77%), Positives = 227/259 (87%)
Frame = +3
Query: 6 PDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPT 185
P V FVPISGW+GDNM+E S NMPW+KGW++ RK E SG +LL+ALD++ PPT
Sbjct: 185 PATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERK-----EGNASGVSLLEALDTILPPT 239
Query: 186 RPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEAL 365
RPT+KPLRLPLQDVYKIGGIGTVPVGRVETGIL+PGMVVTFAP +TTEVKSVEMHHEAL
Sbjct: 240 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEAL 299
Query: 366 TEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSP 545
+EALPGDNVGFN+KNVSVK+IRRGNVC DSKSDP ++A F +QVII+NHPG+I AGYSP
Sbjct: 300 SEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSP 359
Query: 546 VLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYP 725
V+DCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS+YP
Sbjct: 360 VIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYP 419
Query: 726 PLGRFAVRDMKQTVAVGVI 782
PLGRFAVRDM+QTVAVGVI
Sbjct: 420 PLGRFAVRDMRQTVAVGVI 438
>sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic form (EF-1-alpha-S)
Length = 462
Score = 419 bits (1077), Expect = e-117
Identities = 201/259 (77%), Positives = 227/259 (87%)
Frame = +3
Query: 6 PDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPT 185
PD VAFVPISGWNGDNM+E S NMPW+KGW+ITRK E SG TLL+ALD + PP+
Sbjct: 185 PDTVAFVPISGWNGDNMLEPSPNMPWFKGWKITRK-----EGSGSGTTLLEALDCILPPS 239
Query: 186 RPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEAL 365
RPT+KPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTFAP +TTEVKSVEMHHEAL
Sbjct: 240 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPVNVTTEVKSVEMHHEAL 299
Query: 366 TEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSP 545
TEA+PGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AGY+P
Sbjct: 300 TEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQIGAGYAP 359
Query: 546 VLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYP 725
VLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVE+FS+YP
Sbjct: 360 VLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSDYP 419
Query: 726 PLGRFAVRDMKQTVAVGVI 782
PLGRFAVRDM+QTVAVGVI
Sbjct: 420 PLGRFAVRDMRQTVAVGVI 438
>sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha)
Length = 464
Score = 418 bits (1075), Expect = e-117
Identities = 198/259 (76%), Positives = 229/259 (88%)
Frame = +3
Query: 6 PDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPT 185
P ++ FVPISG+NGDNM+E S NMPW+KGW + RK E +GKTLL+ALDS+ PP
Sbjct: 185 PKSIPFVPISGFNGDNMLEPSANMPWFKGWSVERK-----EGTMTGKTLLEALDSVVPPQ 239
Query: 186 RPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEAL 365
RPT+KPLRLPLQDVYKIGGIGTVPVGRVETGILKPGM+VTFAPQ LTTEVKSVEMHHEAL
Sbjct: 240 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMIVTFAPQNLTTEVKSVEMHHEAL 299
Query: 366 TEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSP 545
EALPGDNVGFN+KN+S+K+IRRG+V SDSK+DPA++ F AQVIIMNHPG+I AGY+P
Sbjct: 300 QEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKETKMFTAQVIIMNHPGQISAGYTP 359
Query: 546 VLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYP 725
VLDCHTAHIACKFAEL +K+DRRSGK +ED PK KSGDAG++ L+P+KP+CVETF+EYP
Sbjct: 360 VLDCHTAHIACKFAELKEKVDRRSGKKVEDNPKSLKSGDAGIIDLIPTKPLCVETFTEYP 419
Query: 726 PLGRFAVRDMKQTVAVGVI 782
PLGRFAVRDM+QTVAVGVI
Sbjct: 420 PLGRFAVRDMRQTVAVGVI 438
>sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|P62632|EF1A2_RAT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 418 bits (1074), Expect = e-116
Identities = 199/259 (76%), Positives = 227/259 (87%)
Frame = +3
Query: 6 PDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPT 185
P V FVPISGW+GDNM+E S NMPW+KGW++ RK E SG +LL+ALD++ PPT
Sbjct: 185 PATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERK-----EGNASGVSLLEALDTILPPT 239
Query: 186 RPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEAL 365
RPT+KPLRLPLQDVYKIGGIGTVPVGRVETGIL+PGMVVTFAP +TTEVKSVEMHHEAL
Sbjct: 240 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEAL 299
Query: 366 TEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSP 545
+EALPGDNVGFN+KNVSVK+IRRGNVC DSK+DP ++A F +QVII+NHPG+I AGYSP
Sbjct: 300 SEALPGDNVGFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILNHPGQISAGYSP 359
Query: 546 VLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYP 725
V+DCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS+YP
Sbjct: 360 VIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYP 419
Query: 726 PLGRFAVRDMKQTVAVGVI 782
PLGRFAVRDM+QTVAVGVI
Sbjct: 420 PLGRFAVRDMRQTVAVGVI 438
>sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1) (EF-1AO1)
Length = 461
Score = 417 bits (1073), Expect = e-116
Identities = 201/259 (77%), Positives = 223/259 (86%)
Frame = +3
Query: 6 PDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPT 185
P V FVPISGW+GDNM+E STNMPW+KGW+I RK E SG TLL+ALD + PP
Sbjct: 185 PATVPFVPISGWHGDNMLEASTNMPWFKGWKIERK-----EGNASGITLLEALDCIIPPQ 239
Query: 186 RPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEAL 365
RPTNKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGM+VTFAP +TTEVKSVEMHHEAL
Sbjct: 240 RPTNKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPSNVTTEVKSVEMHHEAL 299
Query: 366 TEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSP 545
EALPGDNVGFN+KN+SVK+IRRGNV DSK+DP QA F AQVII+NHPG+I AGY+P
Sbjct: 300 VEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQAGSFTAQVIILNHPGQISAGYAP 359
Query: 546 VLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYP 725
VLDCHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVETFS+YP
Sbjct: 360 VLDCHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKSGDAAIVEMIPGKPMCVETFSDYP 419
Query: 726 PLGRFAVRDMKQTVAVGVI 782
PLGRFAVRDM+QTVAVGVI
Sbjct: 420 PLGRFAVRDMRQTVAVGVI 438
>sp|P28295|EF1A_ABSGL Elongation factor 1-alpha (EF-1-alpha)
Length = 458
Score = 417 bits (1073), Expect = e-116
Identities = 196/259 (75%), Positives = 228/259 (88%)
Frame = +3
Query: 6 PDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPT 185
P +V FVPISGW+GDNM+EESTNMPWYKGW K K SGKTLLDA+D+++PP
Sbjct: 183 PKSVPFVPISGWHGDNMLEESTNMPWYKGWNKETKAGAK-----SGKTLLDAIDAIDPPQ 237
Query: 186 RPTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEAL 365
RP++KPLRLPLQDVYKIGGIGTVPVGRVETG++K GMVVTFAP +TTEVKSVEMHHE L
Sbjct: 238 RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVTFAPANVTTEVKSVEMHHEQL 297
Query: 366 TEALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSP 545
E LPGDNVGFN+KNVSVK+IRRGNVCSDSK+DPA++A F AQVI++NHPG+I AGY+P
Sbjct: 298 VEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKEAGSFTAQVIVLNHPGQIGAGYAP 357
Query: 546 VLDCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYP 725
VLDCHTAHIACKFAEL++KIDRRSGK LED PK KSGD+ +V+++PSKPMCVE +++YP
Sbjct: 358 VLDCHTAHIACKFAELLEKIDRRSGKKLEDAPKFVKSGDSAIVKMIPSKPMCVEAYTDYP 417
Query: 726 PLGRFAVRDMKQTVAVGVI 782
PLGRFAVRDM+QTVAVGVI
Sbjct: 418 PLGRFAVRDMRQTVAVGVI 436
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,105,991
Number of Sequences: 369166
Number of extensions: 2066562
Number of successful extensions: 6965
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6533
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8598109270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)