Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_F23
(762 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alp... 411 e-114
sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alph... 411 e-114
sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alp... 411 e-114
sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alp... 410 e-114
sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alp... 409 e-114
sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alp... 409 e-114
sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha) 409 e-114
sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte for... 409 e-114
sp|P28295|EF1A_ABSGL Elongation factor 1-alpha (EF-1-alpha) 408 e-114
sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic fo... 407 e-113
>sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62630|EF1A1_RAT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62629|EF1A1_CRIGR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 411 bits (1056), Expect = e-114
Identities = 196/252 (77%), Positives = 221/252 (87%)
Frame = +3
Query: 6 VAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPT 185
VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ SG TLL+ALD + PPTRPT
Sbjct: 188 VAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGS-----ASGTTLLEALDCILPPTRPT 242
Query: 186 NKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEA 365
+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EA
Sbjct: 243 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEA 302
Query: 366 LPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLD 545
LPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AGY+PVLD
Sbjct: 303 LPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLD 362
Query: 546 CHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLG 725
CHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS+YPPLG
Sbjct: 363 CHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLG 422
Query: 726 RFAVRDMKQTVA 761
RFAVRDM+QTVA
Sbjct: 423 RFAVRDMRQTVA 434
>sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor Tu)
(EF-Tu)
Length = 462
Score = 411 bits (1056), Expect = e-114
Identities = 195/252 (77%), Positives = 222/252 (88%)
Frame = +3
Query: 6 VAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPT 185
VAFVPISGWNGDNM+E S+NMPW+KGW++TRK+ SG TLL+ALD + PPTRPT
Sbjct: 188 VAFVPISGWNGDNMLEPSSNMPWFKGWKVTRKDGN-----ASGTTLLEALDCILPPTRPT 242
Query: 186 NKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEA 365
+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EA
Sbjct: 243 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEA 302
Query: 366 LPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLD 545
LPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AGY+PVLD
Sbjct: 303 LPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLD 362
Query: 546 CHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLG 725
CHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVE+FS+YPPLG
Sbjct: 363 CHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLG 422
Query: 726 RFAVRDMKQTVA 761
RFAVRDM+QTVA
Sbjct: 423 RFAVRDMRQTVA 434
>sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q5R1X2|EF1A1_PANTR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68103|EF1A1_BOVIN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68104|EF1A1_HUMAN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q66RN5|EF1A1_FELCA Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 411 bits (1056), Expect = e-114
Identities = 196/252 (77%), Positives = 221/252 (87%)
Frame = +3
Query: 6 VAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPT 185
VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ SG TLL+ALD + PPTRPT
Sbjct: 188 VAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGN-----ASGTTLLEALDCILPPTRPT 242
Query: 186 NKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEA 365
+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EA
Sbjct: 243 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEA 302
Query: 366 LPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLD 545
LPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AGY+PVLD
Sbjct: 303 LPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLD 362
Query: 546 CHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLG 725
CHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS+YPPLG
Sbjct: 363 CHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLG 422
Query: 726 RFAVRDMKQTVA 761
RFAVRDM+QTVA
Sbjct: 423 RFAVRDMRQTVA 434
>sp|Q71V39|EF1A2_RABIT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|Q05639|EF1A2_HUMAN Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 410 bits (1054), Expect = e-114
Identities = 195/252 (77%), Positives = 222/252 (88%)
Frame = +3
Query: 6 VAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPT 185
V FVPISGW+GDNM+E S NMPW+KGW++ RK E SG +LL+ALD++ PPTRPT
Sbjct: 188 VPFVPISGWHGDNMLEPSPNMPWFKGWKVERK-----EGNASGVSLLEALDTILPPTRPT 242
Query: 186 NKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEA 365
+KPLRLPLQDVYKIGGIGTVPVGRVETGIL+PGMVVTFAP +TTEVKSVEMHHEAL+EA
Sbjct: 243 DKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEA 302
Query: 366 LPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLD 545
LPGDNVGFN+KNVSVK+IRRGNVC DSKSDP ++A F +QVII+NHPG+I AGYSPV+D
Sbjct: 303 LPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVID 362
Query: 546 CHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLG 725
CHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS+YPPLG
Sbjct: 363 CHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLG 422
Query: 726 RFAVRDMKQTVA 761
RFAVRDM+QTVA
Sbjct: 423 RFAVRDMRQTVA 434
>sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 409 bits (1052), Expect = e-114
Identities = 195/252 (77%), Positives = 221/252 (87%)
Frame = +3
Query: 6 VAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPT 185
VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ SG TLL+ALD + PPTRPT
Sbjct: 188 VAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGN-----ASGTTLLEALDCILPPTRPT 242
Query: 186 NKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEA 365
+KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPG+VVTFAP +TTEVKSVEMHHEAL+EA
Sbjct: 243 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGVVVTFAPVNVTTEVKSVEMHHEALSEA 302
Query: 366 LPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLD 545
LPGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AGY+PVLD
Sbjct: 303 LPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLD 362
Query: 546 CHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLG 725
CHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS+YPPLG
Sbjct: 363 CHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLG 422
Query: 726 RFAVRDMKQTVA 761
RFAVRDM+QTVA
Sbjct: 423 RFAVRDMRQTVA 434
>sp|P62631|EF1A2_MOUSE Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
sp|P62632|EF1A2_RAT Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation factor 1
A-2) (eEF1A-2) (Statin S1)
Length = 463
Score = 409 bits (1051), Expect = e-114
Identities = 194/252 (76%), Positives = 222/252 (88%)
Frame = +3
Query: 6 VAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPT 185
V FVPISGW+GDNM+E S NMPW+KGW++ RK E SG +LL+ALD++ PPTRPT
Sbjct: 188 VPFVPISGWHGDNMLEPSPNMPWFKGWKVERK-----EGNASGVSLLEALDTILPPTRPT 242
Query: 186 NKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEA 365
+KPLRLPLQDVYKIGGIGTVPVGRVETGIL+PGMVVTFAP +TTEVKSVEMHHEAL+EA
Sbjct: 243 DKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEA 302
Query: 366 LPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLD 545
LPGDNVGFN+KNVSVK+IRRGNVC DSK+DP ++A F +QVII+NHPG+I AGYSPV+D
Sbjct: 303 LPGDNVGFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVID 362
Query: 546 CHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLG 725
CHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V +VP KPMCVE+FS+YPPLG
Sbjct: 363 CHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLG 422
Query: 726 RFAVRDMKQTVA 761
RFAVRDM+QTVA
Sbjct: 423 RFAVRDMRQTVA 434
>sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha)
Length = 464
Score = 409 bits (1051), Expect = e-114
Identities = 193/253 (76%), Positives = 224/253 (88%)
Frame = +3
Query: 3 AVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRP 182
++ FVPISG+NGDNM+E S NMPW+KGW + RK E +GKTLL+ALDS+ PP RP
Sbjct: 187 SIPFVPISGFNGDNMLEPSANMPWFKGWSVERK-----EGTMTGKTLLEALDSVVPPQRP 241
Query: 183 TNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTE 362
T+KPLRLPLQDVYKIGGIGTVPVGRVETGILKPGM+VTFAPQ LTTEVKSVEMHHEAL E
Sbjct: 242 TDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMIVTFAPQNLTTEVKSVEMHHEALQE 301
Query: 363 ALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVL 542
ALPGDNVGFN+KN+S+K+IRRG+V SDSK+DPA++ F AQVIIMNHPG+I AGY+PVL
Sbjct: 302 ALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKETKMFTAQVIIMNHPGQISAGYTPVL 361
Query: 543 DCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPL 722
DCHTAHIACKFAEL +K+DRRSGK +ED PK KSGDAG++ L+P+KP+CVETF+EYPPL
Sbjct: 362 DCHTAHIACKFAELKEKVDRRSGKKVEDNPKSLKSGDAGIIDLIPTKPLCVETFTEYPPL 421
Query: 723 GRFAVRDMKQTVA 761
GRFAVRDM+QTVA
Sbjct: 422 GRFAVRDMRQTVA 434
>sp|P17508|EF1A3_XENLA Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1) (EF-1AO1)
Length = 461
Score = 409 bits (1050), Expect = e-114
Identities = 196/252 (77%), Positives = 218/252 (86%)
Frame = +3
Query: 6 VAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPT 185
V FVPISGW+GDNM+E STNMPW+KGW+I RK E SG TLL+ALD + PP RPT
Sbjct: 188 VPFVPISGWHGDNMLEASTNMPWFKGWKIERK-----EGNASGITLLEALDCIIPPQRPT 242
Query: 186 NKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEA 365
NKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGM+VTFAP +TTEVKSVEMHHEAL EA
Sbjct: 243 NKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPSNVTTEVKSVEMHHEALVEA 302
Query: 366 LPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLD 545
LPGDNVGFN+KN+SVK+IRRGNV DSK+DP QA F AQVII+NHPG+I AGY+PVLD
Sbjct: 303 LPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQAGSFTAQVIILNHPGQISAGYAPVLD 362
Query: 546 CHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLG 725
CHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVETFS+YPPLG
Sbjct: 363 CHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKSGDAAIVEMIPGKPMCVETFSDYPPLG 422
Query: 726 RFAVRDMKQTVA 761
RFAVRDM+QTVA
Sbjct: 423 RFAVRDMRQTVA 434
>sp|P28295|EF1A_ABSGL Elongation factor 1-alpha (EF-1-alpha)
Length = 458
Score = 408 bits (1049), Expect = e-114
Identities = 191/253 (75%), Positives = 223/253 (88%)
Frame = +3
Query: 3 AVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRP 182
+V FVPISGW+GDNM+EESTNMPWYKGW K K SGKTLLDA+D+++PP RP
Sbjct: 185 SVPFVPISGWHGDNMLEESTNMPWYKGWNKETKAGAK-----SGKTLLDAIDAIDPPQRP 239
Query: 183 TNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTE 362
++KPLRLPLQDVYKIGGIGTVPVGRVETG++K GMVVTFAP +TTEVKSVEMHHE L E
Sbjct: 240 SDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVTFAPANVTTEVKSVEMHHEQLVE 299
Query: 363 ALPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVL 542
LPGDNVGFN+KNVSVK+IRRGNVCSDSK+DPA++A F AQVI++NHPG+I AGY+PVL
Sbjct: 300 GLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKEAGSFTAQVIVLNHPGQIGAGYAPVL 359
Query: 543 DCHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPL 722
DCHTAHIACKFAEL++KIDRRSGK LED PK KSGD+ +V+++PSKPMCVE +++YPPL
Sbjct: 360 DCHTAHIACKFAELLEKIDRRSGKKLEDAPKFVKSGDSAIVKMIPSKPMCVEAYTDYPPL 419
Query: 723 GRFAVRDMKQTVA 761
GRFAVRDM+QTVA
Sbjct: 420 GRFAVRDMRQTVA 432
>sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic form (EF-1-alpha-S)
Length = 462
Score = 407 bits (1046), Expect = e-113
Identities = 195/252 (77%), Positives = 221/252 (87%)
Frame = +3
Query: 6 VAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAKKEEIKTSGKTLLDALDSLEPPTRPT 185
VAFVPISGWNGDNM+E S NMPW+KGW+ITRK E SG TLL+ALD + PP+RPT
Sbjct: 188 VAFVPISGWNGDNMLEPSPNMPWFKGWKITRK-----EGSGSGTTLLEALDCILPPSRPT 242
Query: 186 NKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEA 365
+KPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVVTFAP +TTEVKSVEMHHEALTEA
Sbjct: 243 DKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPVNVTTEVKSVEMHHEALTEA 302
Query: 366 LPGDNVGFNIKNVSVKEIRRGNVCSDSKSDPARQATDFVAQVIIMNHPGEIHAGYSPVLD 545
+PGDNVGFN+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I AGY+PVLD
Sbjct: 303 VPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQIGAGYAPVLD 362
Query: 546 CHTAHIACKFAELMKKIDRRSGKDLEDFPKQFKSGDAGLVRLVPSKPMCVETFSEYPPLG 725
CHTAHIACKFAEL +KIDRRSGK LED PK KSGDA +V ++P KPMCVE+FS+YPPLG
Sbjct: 363 CHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLG 422
Query: 726 RFAVRDMKQTVA 761
RFAVRDM+QTVA
Sbjct: 423 RFAVRDMRQTVA 434
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,817,486
Number of Sequences: 369166
Number of extensions: 1923843
Number of successful extensions: 6581
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6229
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7018522000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)