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Planaria EST Database

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01050
         (852 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P48060|GLIP1_HUMAN  Glioma pathogenesis-related protein 1...   138   2e-32
sp|P60623|CRVP_TRIST  Cysteine-rich secretory protein precur...   132   1e-30
sp|Q9CWG1|GLIP1_MOUSE  Glioma pathogenesis-related protein 1...   129   1e-29
sp|O19010|CRIS3_HORSE  Cysteine-rich secretory protein 3 pre...   127   4e-29
sp|Q8JI39|CRVP_TRIFL  Triflin precursor                           124   4e-28
sp|Q7ZZN9|CRVP_TRIJE  Cysteine-rich venom protein precursor ...   123   7e-28
sp|Q8JGT9|CRVP_RHATT  Tigrin precursor                            122   2e-27
sp|Q8JI40|CRVP_AGKHA  Ablomin precursor                           122   2e-27
sp|Q8AVA4|CRVP_PSEAU  Pseudechetoxin precursor (PsTx)             121   2e-27
sp|P79845|CRVP_TRIMU  Cysteine-rich venom protein precursor ...   120   6e-27

>sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1 precursor (GliPR 1) (RTVP-1
           protein)
          Length = 266

 Score =  138 bits (348), Expect = 2e-32
 Identities = 80/204 (39%), Positives = 113/204 (55%), Gaps = 14/204 (6%)
 Frame = +2

Query: 17  IVSFIS-IALTFSTPP--EYKDFL---LKAHNDLRRDVALGKTPNQPGAANMIEMVWDDA 178
           +VSF+S  + T +  P  E +DF+   ++ HN  R +V       +P A++M+ M WD A
Sbjct: 11  MVSFVSNYSHTANILPDIENEDFIKDCVRIHNKFRSEV-------KPTASDMLYMTWDPA 63

Query: 179 LAGKAEEWAGKCIAGHDTY---DDRQLDKFMFVGQNMFAGS----NYKEVVQGWYDEYKD 337
           LA  A+ WA  C   H+T      +    F  +G+N++ GS    +    +  WYDE +D
Sbjct: 64  LAQIAKAWASNCQFSHNTRLKPPHKLHPNFTSLGENIWTGSVPIFSVSSAITNWYDEIQD 123

Query: 338 YTYEGKGCSAVCGHYTQVAWAKSYAVGCAAVNCKEKTG-GSFAYGWLFICNYGPAGNFND 514
           Y ++ + C  VCGHYTQV WA SY VGCA   C + +G  + + G  FICNYGP GN+  
Sbjct: 124 YDFKTRICKKVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-P 182

Query: 515 EAPYEVGAACSKCPKGTSCKNNLC 586
             PY+ GA CS CP    C +NLC
Sbjct: 183 TWPYKRGATCSACPNNDKCLDNLC 206

>sp|P60623|CRVP_TRIST Cysteine-rich secretory protein precursor (Stecrisp)
          Length = 233

 Score =  132 bits (332), Expect = 1e-30
 Identities = 71/184 (38%), Positives = 97/184 (52%), Gaps = 8/184 (4%)
 Frame = +2

Query: 59  PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 238
           PE ++ ++  HN LRR V        P A+NM+ M W    A  AE WA +CI  H +Y+
Sbjct: 24  PEIQNEIVDLHNSLRRSV-------NPTASNMLRMEWYPEAADNAERWAYRCIESHSSYE 76

Query: 239 DRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 400
            R ++     G+N++       + +++  W+DEYKD+ Y G G    +AV GHYTQ+ W 
Sbjct: 77  SRVIEGIK-CGENIYMSPYPMKWTDIIHAWHDEYKDFKY-GVGADPPNAVTGHYTQIVWY 134

Query: 401 KSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEVGAACSKCPKGTSCK 574
           KSY +GCAA  C      S  Y + F+C Y PAGNF      PY  G  C  CP  + C 
Sbjct: 135 KSYRIGCAAAYCP-----SSPYSYFFVCQYCPAGNFIGKTATPYTSGTPCGDCP--SDCD 187

Query: 575 NNLC 586
           N LC
Sbjct: 188 NGLC 191

>sp|Q9CWG1|GLIP1_MOUSE Glioma pathogenesis-related protein 1 precursor (GliPR 1)
          Length = 255

 Score =  129 bits (323), Expect = 1e-29
 Identities = 77/198 (38%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
 Frame = +2

Query: 23  SFISIALTFSTPPEY--KDFL---LKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAG 187
           S  S + T ST P+   +DF+   ++ HN LR  V+       P A NM+ M WD  LA 
Sbjct: 14  SVSSSSFTASTLPDITNEDFIKECVQVHNQLRSKVS-------PPARNMLYMSWDPKLAQ 66

Query: 188 KAEEWAGKCIAGHDTY-DDRQLDKFMFVGQNMFAGS----NYKEVVQGWYDEYKDYTYEG 352
            A+ W   C   H+     R    F  +G+N++ GS    +    +  WY+E K Y +  
Sbjct: 67  IAKAWTKSCEFKHNPQLHSRIHPNFTALGENIWLGSLSIFSVSSAISAWYEEIKHYDFST 126

Query: 353 KGCSAVCGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNFNDEAPYEV 532
           + C  VCGHYTQV WA SY +GCA   C          G  FIC+YGPAGN+    PY+ 
Sbjct: 127 RKCRHVCGHYTQVVWADSYKLGCAVQLCPN--------GANFICDYGPAGNY-PTWPYKQ 177

Query: 533 GAACSKCPKGTSCKNNLC 586
           GA CS CPK   C N+LC
Sbjct: 178 GATCSDCPKDDKCLNSLC 195

>sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 precursor (CRISP-3)
          Length = 245

 Score =  127 bits (319), Expect = 4e-29
 Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 7/185 (3%)
 Frame = +2

Query: 53  TPPEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDT 232
           T  E +  ++  HNDLRR V+       P A+NM++M WD   A  A+ WA KC+  H  
Sbjct: 33  TKSEVQKEIVNKHNDLRRTVS-------PLASNMLKMQWDSKTATNAQNWANKCLLQHSK 85

Query: 233 YDDRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTY--EGKGCSAVCGHYTQVAW 397
            +DR +   M  G+N+F  S   ++ + +Q W+DE  D+ Y    K  +AV GHYTQV W
Sbjct: 86  AEDRAVGT-MKCGENLFMSSIPNSWSDAIQNWHDEVHDFKYGVGPKTPNAVVGHYTQVVW 144

Query: 398 AKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNFNDE--APYEVGAACSKCPKGTSC 571
             SY VGC    C ++  G+  Y   ++C Y PAGN+ ++   PYE G  C++CP   +C
Sbjct: 145 YSSYRVGCGIAYCPKQ--GTLKY--YYVCQYCPAGNYVNKINTPYEQGTPCARCP--GNC 198

Query: 572 KNNLC 586
            N LC
Sbjct: 199 DNGLC 203

>sp|Q8JI39|CRVP_TRIFL Triflin precursor
          Length = 240

 Score =  124 bits (310), Expect = 4e-28
 Identities = 68/184 (36%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
 Frame = +2

Query: 59  PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 238
           PE ++ ++  HN LRR V        P A+NM++M W    A  AE WA +CI  H + D
Sbjct: 31  PEIQNEIIDLHNSLRRSV-------NPTASNMLKMEWYPEAAANAERWAYRCIESHSSRD 83

Query: 239 DRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 400
            R +      G+N++  +    + +++  W+ EYKD+ Y G G     AV GHYTQ+ W 
Sbjct: 84  SRVIGGIK-CGENIYMATYPAKWTDIIHAWHGEYKDFKY-GVGAVPSDAVIGHYTQIVWY 141

Query: 401 KSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEVGAACSKCPKGTSCK 574
           KSY  GCAA  C      S  Y + ++C Y PAGN       PY+ G  C  CP  + C 
Sbjct: 142 KSYRAGCAAAYCP-----SSKYSYFYVCQYCPAGNIIGKTATPYKSGPPCGDCP--SDCD 194

Query: 575 NNLC 586
           N LC
Sbjct: 195 NGLC 198

>sp|Q7ZZN9|CRVP_TRIJE Cysteine-rich venom protein precursor (TJ-CRVP)
          Length = 240

 Score =  123 bits (308), Expect = 7e-28
 Identities = 68/184 (36%), Positives = 93/184 (50%), Gaps = 8/184 (4%)
 Frame = +2

Query: 59  PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 238
           PE ++ ++  HN LRR V        P A+NM++M W    A  AE WA  CI  H + D
Sbjct: 31  PEIQNEIIDLHNSLRRSV-------NPTASNMLKMEWYPEAAANAERWAYGCIESHSSRD 83

Query: 239 DRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 400
            R ++     G+N++       + +++  W+ EYKD+ Y G G     AV GHYTQ+ W 
Sbjct: 84  SRVIEGIK-CGENIYMSPYPMKWTDIIHAWHGEYKDFKY-GVGAVPSDAVVGHYTQIVWY 141

Query: 401 KSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEVGAACSKCPKGTSCK 574
           KSY +GCAA  C      S  Y + ++C Y PAGN       PY  G  C  CP  + C 
Sbjct: 142 KSYRIGCAAAYCP-----SAEYSYFYVCQYCPAGNMIGKTATPYTSGPPCGDCP--SDCD 194

Query: 575 NNLC 586
           N LC
Sbjct: 195 NGLC 198

>sp|Q8JGT9|CRVP_RHATT Tigrin precursor
          Length = 237

 Score =  122 bits (305), Expect = 2e-27
 Identities = 71/198 (35%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
 Frame = +2

Query: 23  SFISIALTFSTP--PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAE 196
           SF ++     +P  P  +  ++  HN  RR V       +P A NM++M W    A  AE
Sbjct: 16  SFGNVDFNSESPRNPGKQQEIVNIHNSFRRSV-------RPTARNMLKMEWYSEAASNAE 68

Query: 197 EWAGKCIAGHDTYDDRQLDKFMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYEGKGCS- 364
            WA +C   H     R L+     G+N+F  S+   +  ++Q WYDEY+++ Y G G + 
Sbjct: 69  RWAYQCAYDHSPRSSRILNGIQ-CGENIFMASDPWAWTSIIQDWYDEYRNFVY-GVGANP 126

Query: 365 --AVCGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEV 532
             +V GHYTQ+ W KSY VGCAA  C      S  Y + ++C Y PAGN   +   PY  
Sbjct: 127 PDSVTGHYTQIVWYKSYLVGCAAAYCP-----SSLYNYFYVCQYCPAGNIQGSTSTPYAS 181

Query: 533 GAACSKCPKGTSCKNNLC 586
           G  C+ CP  ++C N LC
Sbjct: 182 GPTCADCP--SNCDNGLC 197

>sp|Q8JI40|CRVP_AGKHA Ablomin precursor
          Length = 240

 Score =  122 bits (305), Expect = 2e-27
 Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 8/184 (4%)
 Frame = +2

Query: 59  PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 238
           PE ++ ++  HN LRR V        P A+NM++M W    A  AE WA +CI  H + D
Sbjct: 31  PEIQNEIVDLHNSLRRSV-------NPTASNMLKMEWYPEAAANAERWAYRCIEDHSSPD 83

Query: 239 DRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 400
            R L+     G+N++       + +++  W+DEYK++ Y G G    +AV GH+TQ+ W 
Sbjct: 84  SRVLEGIK-CGENIYMSPIPMKWTDIIHIWHDEYKNFKY-GIGADPPNAVSGHFTQIVWY 141

Query: 401 KSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNFNDE--APYEVGAACSKCPKGTSCK 574
           KSY  GCAA  C      S  Y + ++C Y PAGN   +   PY  G  C  CP  ++C 
Sbjct: 142 KSYRAGCAAAYCP-----SSEYSYFYVCQYCPAGNMRGKTATPYTSGPPCGDCP--SACD 194

Query: 575 NNLC 586
           N LC
Sbjct: 195 NGLC 198

>sp|Q8AVA4|CRVP_PSEAU Pseudechetoxin precursor (PsTx)
          Length = 238

 Score =  121 bits (304), Expect = 2e-27
 Identities = 68/186 (36%), Positives = 94/186 (50%), Gaps = 7/186 (3%)
 Frame = +2

Query: 50  STPPEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHD 229
           S    Y+  ++  HN LRR V       +P A NM++M W+   A  A+ WA +C   H 
Sbjct: 28  SNKKNYQKEIVDKHNALRRSV-------KPTARNMLQMKWNSRAAQNAKRWANRCTFAHS 80

Query: 230 TYDDRQLDKFMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYE--GKGCSAVCGHYTQVA 394
             + R + K    G+N+F  S    +  VVQ WYDE K++ Y    K   +V GHYTQV 
Sbjct: 81  PPNKRTVGKLR-CGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVV 139

Query: 395 WAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNFNDE--APYEVGAACSKCPKGTS 568
           W KSY +GCA+  C           +L++C Y PAGN       PY+ G  C+ CP  ++
Sbjct: 140 WYKSYLIGCASAKCSSSK-------YLYVCQYCPAGNIRGSIATPYKSGPPCADCP--SA 190

Query: 569 CKNNLC 586
           C N LC
Sbjct: 191 CVNKLC 196

>sp|P79845|CRVP_TRIMU Cysteine-rich venom protein precursor (TM-CRVP)
          Length = 240

 Score =  120 bits (300), Expect = 6e-27
 Identities = 67/184 (36%), Positives = 93/184 (50%), Gaps = 8/184 (4%)
 Frame = +2

Query: 59  PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 238
           PE ++ ++  HN LRR V        P A+NM++M W    A  AE WA +CI  H + D
Sbjct: 31  PEIQNEIIDLHNSLRRSV-------NPTASNMLKMEWYPEAAANAERWAYRCIESHSSRD 83

Query: 239 DRQLDKFMFVGQNMFAG---SNYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 400
            R +      G+N++     + + +++  W+ EYKD+ Y G G    +A  GHYTQ+ W 
Sbjct: 84  SRVIGGIK-CGENIYMSPYPAKWTDIIHAWHGEYKDFKY-GVGAVPSNAATGHYTQIVWY 141

Query: 401 KSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEVGAACSKCPKGTSCK 574
           KSY  GCAA  C      S  Y + ++C Y PAGN       PY  G  C  CP  + C 
Sbjct: 142 KSYRGGCAAAYCP-----SSKYRYFYVCQYCPAGNMIGKTATPYTSGPPCGDCP--SDCD 194

Query: 575 NNLC 586
           N LC
Sbjct: 195 NGLC 198

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,617,657
Number of Sequences: 369166
Number of extensions: 1894498
Number of successful extensions: 6079
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5871
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

1. Dr_sW_027_M10
2. Dr_sW_026_I20
3. Dr_sW_027_I04
4. Dr_sW_001_J17
5. Dr_sW_006_J21
6. Dr_sW_024_E24
7. Dr_sW_015_I02
8. Dr_sW_025_M20
9. Dr_sW_011_B06
10. Dr_sW_026_D24
11. Dr_sW_002_H17
12. Dr_sW_020_K18
13. Dr_sW_013_B11
14. Dr_sW_026_M22
15. Dr_sW_013_G03
16. Dr_sW_015_D09
17. Dr_sW_020_E19
18. Dr_sW_012_D21
19. Dr_sW_017_L15
20. Dr_sW_002_D21
21. Dr_sW_019_K07
22. Dr_sW_026_H09
23. Dr_sW_006_I23
24. Dr_sW_013_C12