Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_J17
(834 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1... 134 4e-31
sp|P60623|CRVP_TRIST Cysteine-rich secretory protein precur... 127 3e-29
sp|Q9CWG1|GLIP1_MOUSE Glioma pathogenesis-related protein 1... 124 3e-28
sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 pre... 122 9e-28
sp|Q8JI39|CRVP_TRIFL Triflin precursor 119 1e-26
sp|Q7ZZN9|CRVP_TRIJE Cysteine-rich venom protein precursor ... 118 2e-26
sp|Q8JGT9|CRVP_RHATT Tigrin precursor 117 4e-26
sp|Q8JI40|CRVP_AGKHA Ablomin precursor 117 4e-26
sp|Q8AVA4|CRVP_PSEAU Pseudechetoxin precursor (PsTx) 117 5e-26
sp|Q7ZT98|CRVP_OPHHA Ophanin precursor (Opharin) 115 1e-25
>sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1 precursor (GliPR 1) (RTVP-1
protein)
Length = 266
Score = 134 bits (336), Expect = 4e-31
Identities = 79/204 (38%), Positives = 112/204 (54%), Gaps = 14/204 (6%)
Frame = +1
Query: 16 IVSFIS-IALTFSTPP--EYKDFL---LKAHNDLRRDVALGKTPNQPGAANMIEMVWDDA 177
+VSF+S + T + P E +DF+ ++ HN R +V +P A++M+ M WD A
Sbjct: 11 MVSFVSNYSHTANILPDIENEDFIKDCVRIHNKFRSEV-------KPTASDMLYMTWDPA 63
Query: 178 LAGKAEEWAGKCIAGHDTY---DDRQLDKFMFVGQNMFAGS----NYKEVVQGWYDEYKD 336
LA A+ WA C H+T + F +G+N++ GS + + WYDE +D
Sbjct: 64 LAQIAKAWASNCQFSHNTRLKPPHKLHPNFTSLGENIWTGSVPIFSVSSAITNWYDEIQD 123
Query: 337 YTYEGKGCSAVCGHYTQVAWAKSYAVGCAAVNRKEKTG-GSFAYGWLFICNYGPAGNFND 513
Y ++ + C VCGHYTQV WA SY VGCA + +G + + G FICNYGP GN+
Sbjct: 124 YDFKTRICKKVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-P 182
Query: 514 EAPYEVGAACSKCPKGTSCKNNLC 585
PY+ GA CS CP C +NLC
Sbjct: 183 TWPYKRGATCSACPNNDKCLDNLC 206
>sp|P60623|CRVP_TRIST Cysteine-rich secretory protein precursor (Stecrisp)
Length = 233
Score = 127 bits (320), Expect = 3e-29
Identities = 70/184 (38%), Positives = 96/184 (52%), Gaps = 8/184 (4%)
Frame = +1
Query: 58 PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 237
PE ++ ++ HN LRR V P A+NM+ M W A AE WA +CI H +Y+
Sbjct: 24 PEIQNEIVDLHNSLRRSV-------NPTASNMLRMEWYPEAADNAERWAYRCIESHSSYE 76
Query: 238 DRQLDKFMFVGQNMFAG---SNYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 399
R ++ G+N++ + +++ W+DEYKD+ Y G G +AV GHYTQ+ W
Sbjct: 77 SRVIEGIK-CGENIYMSPYPMKWTDIIHAWHDEYKDFKY-GVGADPPNAVTGHYTQIVWY 134
Query: 400 KSYAVGCAAVNRKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEVGAACSKCPKGTSCK 573
KSY +GCAA S Y + F+C Y PAGNF PY G C CP + C
Sbjct: 135 KSYRIGCAAAYCP-----SSPYSYFFVCQYCPAGNFIGKTATPYTSGTPCGDCP--SDCD 187
Query: 574 NNLC 585
N LC
Sbjct: 188 NGLC 191
>sp|Q9CWG1|GLIP1_MOUSE Glioma pathogenesis-related protein 1 precursor (GliPR 1)
Length = 255
Score = 124 bits (311), Expect = 3e-28
Identities = 76/198 (38%), Positives = 100/198 (50%), Gaps = 10/198 (5%)
Frame = +1
Query: 22 SFISIALTFSTPPEY--KDFL---LKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAG 186
S S + T ST P+ +DF+ ++ HN LR V+ P A NM+ M WD LA
Sbjct: 14 SVSSSSFTASTLPDITNEDFIKECVQVHNQLRSKVS-------PPARNMLYMSWDPKLAQ 66
Query: 187 KAEEWAGKCIAGHDTY-DDRQLDKFMFVGQNMFAGS----NYKEVVQGWYDEYKDYTYEG 351
A+ W C H+ R F +G+N++ GS + + WY+E K Y +
Sbjct: 67 IAKAWTKSCEFKHNPQLHSRIHPNFTALGENIWLGSLSIFSVSSAISAWYEEIKHYDFST 126
Query: 352 KGCSAVCGHYTQVAWAKSYAVGCAAVNRKEKTGGSFAYGWLFICNYGPAGNFNDEAPYEV 531
+ C VCGHYTQV WA SY +GCA G FIC+YGPAGN+ PY+
Sbjct: 127 RKCRHVCGHYTQVVWADSYKLGCAV--------QLCPNGANFICDYGPAGNY-PTWPYKQ 177
Query: 532 GAACSKCPKGTSCKNNLC 585
GA CS CPK C N+LC
Sbjct: 178 GATCSDCPKDDKCLNSLC 195
>sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 precursor (CRISP-3)
Length = 245
Score = 122 bits (307), Expect = 9e-28
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 7/185 (3%)
Frame = +1
Query: 52 TPPEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDT 231
T E + ++ HNDLRR V+ P A+NM++M WD A A+ WA KC+ H
Sbjct: 33 TKSEVQKEIVNKHNDLRRTVS-------PLASNMLKMQWDSKTATNAQNWANKCLLQHSK 85
Query: 232 YDDRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTY--EGKGCSAVCGHYTQVAW 396
+DR + M G+N+F S ++ + +Q W+DE D+ Y K +AV GHYTQV W
Sbjct: 86 AEDRAVGT-MKCGENLFMSSIPNSWSDAIQNWHDEVHDFKYGVGPKTPNAVVGHYTQVVW 144
Query: 397 AKSYAVGCAAVNRKEKTGGSFAYGWLFICNYGPAGNFNDE--APYEVGAACSKCPKGTSC 570
SY VGC ++ G+ Y ++C Y PAGN+ ++ PYE G C++CP +C
Sbjct: 145 YSSYRVGCGIAYCPKQ--GTLKY--YYVCQYCPAGNYVNKINTPYEQGTPCARCP--GNC 198
Query: 571 KNNLC 585
N LC
Sbjct: 199 DNGLC 203
>sp|Q8JI39|CRVP_TRIFL Triflin precursor
Length = 240
Score = 119 bits (298), Expect = 1e-26
Identities = 67/184 (36%), Positives = 93/184 (50%), Gaps = 8/184 (4%)
Frame = +1
Query: 58 PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 237
PE ++ ++ HN LRR V P A+NM++M W A AE WA +CI H + D
Sbjct: 31 PEIQNEIIDLHNSLRRSV-------NPTASNMLKMEWYPEAAANAERWAYRCIESHSSRD 83
Query: 238 DRQLDKFMFVGQNMFAG---SNYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 399
R + G+N++ + + +++ W+ EYKD+ Y G G AV GHYTQ+ W
Sbjct: 84 SRVIGGIK-CGENIYMATYPAKWTDIIHAWHGEYKDFKY-GVGAVPSDAVIGHYTQIVWY 141
Query: 400 KSYAVGCAAVNRKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEVGAACSKCPKGTSCK 573
KSY GCAA S Y + ++C Y PAGN PY+ G C CP + C
Sbjct: 142 KSYRAGCAAAYCP-----SSKYSYFYVCQYCPAGNIIGKTATPYKSGPPCGDCP--SDCD 194
Query: 574 NNLC 585
N LC
Sbjct: 195 NGLC 198
>sp|Q7ZZN9|CRVP_TRIJE Cysteine-rich venom protein precursor (TJ-CRVP)
Length = 240
Score = 118 bits (296), Expect = 2e-26
Identities = 67/184 (36%), Positives = 92/184 (50%), Gaps = 8/184 (4%)
Frame = +1
Query: 58 PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 237
PE ++ ++ HN LRR V P A+NM++M W A AE WA CI H + D
Sbjct: 31 PEIQNEIIDLHNSLRRSV-------NPTASNMLKMEWYPEAAANAERWAYGCIESHSSRD 83
Query: 238 DRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 399
R ++ G+N++ + +++ W+ EYKD+ Y G G AV GHYTQ+ W
Sbjct: 84 SRVIEGIK-CGENIYMSPYPMKWTDIIHAWHGEYKDFKY-GVGAVPSDAVVGHYTQIVWY 141
Query: 400 KSYAVGCAAVNRKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEVGAACSKCPKGTSCK 573
KSY +GCAA S Y + ++C Y PAGN PY G C CP + C
Sbjct: 142 KSYRIGCAAAYCP-----SAEYSYFYVCQYCPAGNMIGKTATPYTSGPPCGDCP--SDCD 194
Query: 574 NNLC 585
N LC
Sbjct: 195 NGLC 198
>sp|Q8JGT9|CRVP_RHATT Tigrin precursor
Length = 237
Score = 117 bits (293), Expect = 4e-26
Identities = 70/198 (35%), Positives = 100/198 (50%), Gaps = 10/198 (5%)
Frame = +1
Query: 22 SFISIALTFSTP--PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAE 195
SF ++ +P P + ++ HN RR V +P A NM++M W A AE
Sbjct: 16 SFGNVDFNSESPRNPGKQQEIVNIHNSFRRSV-------RPTARNMLKMEWYSEAASNAE 68
Query: 196 EWAGKCIAGHDTYDDRQLDKFMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYEGKGCS- 363
WA +C H R L+ G+N+F S+ + ++Q WYDEY+++ Y G G +
Sbjct: 69 RWAYQCAYDHSPRSSRILNGIQ-CGENIFMASDPWAWTSIIQDWYDEYRNFVY-GVGANP 126
Query: 364 --AVCGHYTQVAWAKSYAVGCAAVNRKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEV 531
+V GHYTQ+ W KSY VGCAA S Y + ++C Y PAGN + PY
Sbjct: 127 PDSVTGHYTQIVWYKSYLVGCAAAYCP-----SSLYNYFYVCQYCPAGNIQGSTSTPYAS 181
Query: 532 GAACSKCPKGTSCKNNLC 585
G C+ CP ++C N LC
Sbjct: 182 GPTCADCP--SNCDNGLC 197
>sp|Q8JI40|CRVP_AGKHA Ablomin precursor
Length = 240
Score = 117 bits (293), Expect = 4e-26
Identities = 67/184 (36%), Positives = 96/184 (52%), Gaps = 8/184 (4%)
Frame = +1
Query: 58 PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 237
PE ++ ++ HN LRR V P A+NM++M W A AE WA +CI H + D
Sbjct: 31 PEIQNEIVDLHNSLRRSV-------NPTASNMLKMEWYPEAAANAERWAYRCIEDHSSPD 83
Query: 238 DRQLDKFMFVGQNMFAG---SNYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 399
R L+ G+N++ + +++ W+DEYK++ Y G G +AV GH+TQ+ W
Sbjct: 84 SRVLEGIK-CGENIYMSPIPMKWTDIIHIWHDEYKNFKY-GIGADPPNAVSGHFTQIVWY 141
Query: 400 KSYAVGCAAVNRKEKTGGSFAYGWLFICNYGPAGNFNDE--APYEVGAACSKCPKGTSCK 573
KSY GCAA S Y + ++C Y PAGN + PY G C CP ++C
Sbjct: 142 KSYRAGCAAAYCP-----SSEYSYFYVCQYCPAGNMRGKTATPYTSGPPCGDCP--SACD 194
Query: 574 NNLC 585
N LC
Sbjct: 195 NGLC 198
>sp|Q8AVA4|CRVP_PSEAU Pseudechetoxin precursor (PsTx)
Length = 238
Score = 117 bits (292), Expect = 5e-26
Identities = 67/186 (36%), Positives = 93/186 (50%), Gaps = 7/186 (3%)
Frame = +1
Query: 49 STPPEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHD 228
S Y+ ++ HN LRR V +P A NM++M W+ A A+ WA +C H
Sbjct: 28 SNKKNYQKEIVDKHNALRRSV-------KPTARNMLQMKWNSRAAQNAKRWANRCTFAHS 80
Query: 229 TYDDRQLDKFMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYE--GKGCSAVCGHYTQVA 393
+ R + K G+N+F S + VVQ WYDE K++ Y K +V GHYTQV
Sbjct: 81 PPNKRTVGKLR-CGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVV 139
Query: 394 WAKSYAVGCAAVNRKEKTGGSFAYGWLFICNYGPAGNFNDE--APYEVGAACSKCPKGTS 567
W KSY +GCA+ +L++C Y PAGN PY+ G C+ CP ++
Sbjct: 140 WYKSYLIGCASAKCSSSK-------YLYVCQYCPAGNIRGSIATPYKSGPPCADCP--SA 190
Query: 568 CKNNLC 585
C N LC
Sbjct: 191 CVNKLC 196
>sp|Q7ZT98|CRVP_OPHHA Ophanin precursor (Opharin)
Length = 239
Score = 115 bits (289), Expect = 1e-25
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Frame = +1
Query: 76 LLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYDDRQLDK 255
++ HN LRR V+ P A+NM++M W A AE WA C GH R L+
Sbjct: 36 IVDLHNSLRRSVS-------PTASNMLKMQWYPEAASNAERWASNCNLGHSPDYSRVLEG 88
Query: 256 FMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYEGKGCS---AVCGHYTQVAWAKSYAVG 417
+ G+N++ SN + E++Q W+DEYK++ Y G G + +V GHYTQ+ W K+Y +G
Sbjct: 89 -IECGENIYMSSNPRAWTEIIQLWHDEYKNFVY-GVGANPPGSVTGHYTQIVWYKTYRIG 146
Query: 418 CAAVNRKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEVGAACSKCPKGTSCKNNLC 585
CA S Y + ++C Y P+GN + PY+ G C CP ++C N LC
Sbjct: 147 CAV-----NYCPSSEYSYFYVCQYCPSGNMRGSTATPYKSGPTCGDCP--SACDNGLC 197
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,395,955
Number of Sequences: 369166
Number of extensions: 1858008
Number of successful extensions: 5939
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5732
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8100769320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)