Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_E19
(667 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1... 116 5e-26
sp|P60623|CRVP_TRIST Cysteine-rich secretory protein precur... 109 6e-24
sp|Q9CWG1|GLIP1_MOUSE Glioma pathogenesis-related protein 1... 106 6e-23
sp|Q8JGT9|CRVP_RHATT Tigrin precursor 102 7e-22
sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 pre... 102 1e-21
sp|Q8JI39|CRVP_TRIFL Triflin precursor 100 4e-21
sp|Q7ZT98|CRVP_OPHHA Ophanin precursor (Opharin) 100 6e-21
sp|Q7ZZN9|CRVP_TRIJE Cysteine-rich venom protein precursor ... 99 8e-21
sp|Q8AVA4|CRVP_PSEAU Pseudechetoxin precursor (PsTx) 99 8e-21
sp|Q8JI40|CRVP_AGKHA Ablomin precursor 99 1e-20
>sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1 precursor (GliPR 1) (RTVP-1
protein)
Length = 266
Score = 116 bits (291), Expect = 5e-26
Identities = 58/140 (41%), Positives = 78/140 (55%), Gaps = 8/140 (5%)
Frame = +2
Query: 23 AEEWAGKCIAGHDTY---DDRQLDKFMFVGQNMFAGS----NYKEVVQGWYDEYKDYTYE 181
A+ WA C H+T + F +G+N++ GS + + WYDE +DY ++
Sbjct: 68 AKAWASNCQFSHNTRLKPPHKLHPNFTSLGENIWTGSVPIFSVSSAITNWYDEIQDYDFK 127
Query: 182 GKGCSAVCGHYTQVAWAKSYAVGCAAVNCKEKTG-GSFAYGWLFICNYGPAGNFNDEAPY 358
+ C VCGHYTQV WA SY VGCA C + +G + + G FICNYGP GN+ PY
Sbjct: 128 TRICKKVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-PTWPY 186
Query: 359 EVGAACSKCPKGTSCKNNLC 418
+ GA CS CP C +NLC
Sbjct: 187 KRGATCSACPNNDKCLDNLC 206
>sp|P60623|CRVP_TRIST Cysteine-rich secretory protein precursor (Stecrisp)
Length = 233
Score = 109 bits (273), Expect = 6e-24
Identities = 56/140 (40%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Frame = +2
Query: 23 AEEWAGKCIAGHDTYDDRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC 193
AE WA +CI H +Y+ R ++ G+N++ + +++ W+DEYKD+ Y G G
Sbjct: 61 AERWAYRCIESHSSYESRVIEGIK-CGENIYMSPYPMKWTDIIHAWHDEYKDFKY-GVGA 118
Query: 194 ---SAVCGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPY 358
+AV GHYTQ+ W KSY +GCAA C S Y + F+C Y PAGNF PY
Sbjct: 119 DPPNAVTGHYTQIVWYKSYRIGCAAAYCP-----SSPYSYFFVCQYCPAGNFIGKTATPY 173
Query: 359 EVGAACSKCPKGTSCKNNLC 418
G C CP + C N LC
Sbjct: 174 TSGTPCGDCP--SDCDNGLC 191
>sp|Q9CWG1|GLIP1_MOUSE Glioma pathogenesis-related protein 1 precursor (GliPR 1)
Length = 255
Score = 106 bits (264), Expect = 6e-23
Identities = 55/137 (40%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Frame = +2
Query: 23 AEEWAGKCIAGHDTY-DDRQLDKFMFVGQNMFAGS----NYKEVVQGWYDEYKDYTYEGK 187
A+ W C H+ R F +G+N++ GS + + WY+E K Y + +
Sbjct: 68 AKAWTKSCEFKHNPQLHSRIHPNFTALGENIWLGSLSIFSVSSAISAWYEEIKHYDFSTR 127
Query: 188 GCSAVCGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNFNDEAPYEVG 367
C VCGHYTQV WA SY +GCA C G FIC+YGPAGN+ PY+ G
Sbjct: 128 KCRHVCGHYTQVVWADSYKLGCAVQLCPN--------GANFICDYGPAGNY-PTWPYKQG 178
Query: 368 AACSKCPKGTSCKNNLC 418
A CS CPK C N+LC
Sbjct: 179 ATCSDCPKDDKCLNSLC 195
>sp|Q8JGT9|CRVP_RHATT Tigrin precursor
Length = 237
Score = 102 bits (255), Expect = 7e-22
Identities = 55/140 (39%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Frame = +2
Query: 23 AEEWAGKCIAGHDTYDDRQLDKFMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYEGKGC 193
AE WA +C H R L+ G+N+F S+ + ++Q WYDEY+++ Y G G
Sbjct: 67 AERWAYQCAYDHSPRSSRILNGIQ-CGENIFMASDPWAWTSIIQDWYDEYRNFVY-GVGA 124
Query: 194 S---AVCGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPY 358
+ +V GHYTQ+ W KSY VGCAA C S Y + ++C Y PAGN + PY
Sbjct: 125 NPPDSVTGHYTQIVWYKSYLVGCAAAYCP-----SSLYNYFYVCQYCPAGNIQGSTSTPY 179
Query: 359 EVGAACSKCPKGTSCKNNLC 418
G C+ CP ++C N LC
Sbjct: 180 ASGPTCADCP--SNCDNGLC 197
>sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 precursor (CRISP-3)
Length = 245
Score = 102 bits (253), Expect = 1e-21
Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 7/143 (4%)
Frame = +2
Query: 11 TRGKAEEWAGKCIAGHDTYDDRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYE 181
T A+ WA KC+ H +DR + M G+N+F S ++ + +Q W+DE D+ Y
Sbjct: 68 TATNAQNWANKCLLQHSKAEDRAVGT-MKCGENLFMSSIPNSWSDAIQNWHDEVHDFKYG 126
Query: 182 --GKGCSAVCGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNFNDE-- 349
K +AV GHYTQV W SY VGC C ++ G+ Y ++C Y PAGN+ ++
Sbjct: 127 VGPKTPNAVVGHYTQVVWYSSYRVGCGIAYCPKQ--GTLKY--YYVCQYCPAGNYVNKIN 182
Query: 350 APYEVGAACSKCPKGTSCKNNLC 418
PYE G C++CP +C N LC
Sbjct: 183 TPYEQGTPCARCP--GNCDNGLC 203
>sp|Q8JI39|CRVP_TRIFL Triflin precursor
Length = 240
Score = 100 bits (248), Expect = 4e-21
Identities = 53/140 (37%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Frame = +2
Query: 23 AEEWAGKCIAGHDTYDDRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC 193
AE WA +CI H + D R + G+N++ + + +++ W+ EYKD+ Y G G
Sbjct: 68 AERWAYRCIESHSSRDSRVIGGIK-CGENIYMATYPAKWTDIIHAWHGEYKDFKY-GVGA 125
Query: 194 ---SAVCGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPY 358
AV GHYTQ+ W KSY GCAA C S Y + ++C Y PAGN PY
Sbjct: 126 VPSDAVIGHYTQIVWYKSYRAGCAAAYCP-----SSKYSYFYVCQYCPAGNIIGKTATPY 180
Query: 359 EVGAACSKCPKGTSCKNNLC 418
+ G C CP + C N LC
Sbjct: 181 KSGPPCGDCP--SDCDNGLC 198
>sp|Q7ZT98|CRVP_OPHHA Ophanin precursor (Opharin)
Length = 239
Score = 99.8 bits (247), Expect = 6e-21
Identities = 53/140 (37%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Frame = +2
Query: 23 AEEWAGKCIAGHDTYDDRQLDKFMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYEGKGC 193
AE WA C GH R L+ G+N++ SN + E++Q W+DEYK++ Y G G
Sbjct: 67 AERWASNCNLGHSPDYSRVLEGIE-CGENIYMSSNPRAWTEIIQLWHDEYKNFVY-GVGA 124
Query: 194 S---AVCGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPY 358
+ +V GHYTQ+ W K+Y +GCA C S Y + ++C Y P+GN + PY
Sbjct: 125 NPPGSVTGHYTQIVWYKTYRIGCAVNYCP-----SSEYSYFYVCQYCPSGNMRGSTATPY 179
Query: 359 EVGAACSKCPKGTSCKNNLC 418
+ G C CP ++C N LC
Sbjct: 180 KSGPTCGDCP--SACDNGLC 197
>sp|Q7ZZN9|CRVP_TRIJE Cysteine-rich venom protein precursor (TJ-CRVP)
Length = 240
Score = 99.4 bits (246), Expect = 8e-21
Identities = 53/140 (37%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Frame = +2
Query: 23 AEEWAGKCIAGHDTYDDRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC 193
AE WA CI H + D R ++ G+N++ + +++ W+ EYKD+ Y G G
Sbjct: 68 AERWAYGCIESHSSRDSRVIEGIK-CGENIYMSPYPMKWTDIIHAWHGEYKDFKY-GVGA 125
Query: 194 ---SAVCGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPY 358
AV GHYTQ+ W KSY +GCAA C S Y + ++C Y PAGN PY
Sbjct: 126 VPSDAVVGHYTQIVWYKSYRIGCAAAYCP-----SAEYSYFYVCQYCPAGNMIGKTATPY 180
Query: 359 EVGAACSKCPKGTSCKNNLC 418
G C CP + C N LC
Sbjct: 181 TSGPPCGDCP--SDCDNGLC 198
>sp|Q8AVA4|CRVP_PSEAU Pseudechetoxin precursor (PsTx)
Length = 238
Score = 99.4 bits (246), Expect = 8e-21
Identities = 53/139 (38%), Positives = 72/139 (51%), Gaps = 7/139 (5%)
Frame = +2
Query: 23 AEEWAGKCIAGHDTYDDRQLDKFMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYE--GK 187
A+ WA +C H + R + K G+N+F S + VVQ WYDE K++ Y K
Sbjct: 68 AKRWANRCTFAHSPPNKRTVGKLR-CGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAK 126
Query: 188 GCSAVCGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNFNDE--APYE 361
+V GHYTQV W KSY +GCA+ C +L++C Y PAGN PY+
Sbjct: 127 PPGSVIGHYTQVVWYKSYLIGCASAKCSSSK-------YLYVCQYCPAGNIRGSIATPYK 179
Query: 362 VGAACSKCPKGTSCKNNLC 418
G C+ CP ++C N LC
Sbjct: 180 SGPPCADCP--SACVNKLC 196
>sp|Q8JI40|CRVP_AGKHA Ablomin precursor
Length = 240
Score = 98.6 bits (244), Expect = 1e-20
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 8/140 (5%)
Frame = +2
Query: 23 AEEWAGKCIAGHDTYDDRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC 193
AE WA +CI H + D R L+ G+N++ + +++ W+DEYK++ Y G G
Sbjct: 68 AERWAYRCIEDHSSPDSRVLEGIK-CGENIYMSPIPMKWTDIIHIWHDEYKNFKY-GIGA 125
Query: 194 ---SAVCGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNFNDE--APY 358
+AV GH+TQ+ W KSY GCAA C S Y + ++C Y PAGN + PY
Sbjct: 126 DPPNAVSGHFTQIVWYKSYRAGCAAAYCP-----SSEYSYFYVCQYCPAGNMRGKTATPY 180
Query: 359 EVGAACSKCPKGTSCKNNLC 418
G C CP ++C N LC
Sbjct: 181 TSGPPCGDCP--SACDNGLC 198
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,099,193
Number of Sequences: 369166
Number of extensions: 1491975
Number of successful extensions: 5299
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5134
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5608903050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)