Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_D09
(642 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1... 110 2e-24
sp|Q9CWG1|GLIP1_MOUSE Glioma pathogenesis-related protein 1... 103 3e-22
sp|P60623|CRVP_TRIST Cysteine-rich secretory protein precur... 101 1e-21
sp|Q8JGT9|CRVP_RHATT Tigrin precursor 95 2e-19
sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 pre... 93 5e-19
sp|Q7ZZN9|CRVP_TRIJE Cysteine-rich venom protein precursor ... 92 1e-18
sp|Q8JI39|CRVP_TRIFL Triflin precursor 92 1e-18
sp|Q8AVA4|CRVP_PSEAU Pseudechetoxin precursor (PsTx) 92 1e-18
sp|Q8UW11|CRVP2_LAPHA Cysteine-rich venom protein 2 precurs... 91 3e-18
sp|Q8JI40|CRVP_AGKHA Ablomin precursor 91 3e-18
>sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1 precursor (GliPR 1) (RTVP-1
protein)
Length = 266
Score = 110 bits (276), Expect = 2e-24
Identities = 52/115 (45%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Frame = +1
Query: 64 FMFVGQNMFAGS----NYKEVVQGWYDEYKDYTYEGKGCSAVCGHYTQVAWAKSYAVGCA 231
F +G+N++ GS + + WYDE +DY ++ + C VCGHYTQV WA SY VGCA
Sbjct: 93 FTSLGENIWTGSVPIFSVSSAITNWYDEIQDYDFKTRICKKVCGHYTQVVWADSYKVGCA 152
Query: 232 AVNCKEKTG-GSFAYGWLFICNYGPAGNFNDEAPYEVGAACSKCPKGTSCKNNLC 393
C + +G + + G FICNYGP GN+ PY+ GA CS CP C +NLC
Sbjct: 153 VQFCPKVSGFDALSNGAHFICNYGPGGNY-PTWPYKRGATCSACPNNDKCLDNLC 206
>sp|Q9CWG1|GLIP1_MOUSE Glioma pathogenesis-related protein 1 precursor (GliPR 1)
Length = 255
Score = 103 bits (258), Expect = 3e-22
Identities = 54/133 (40%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Frame = +1
Query: 10 TRKCIAGHDTY-DDRQLDKFMFVGQNMFAGS----NYKEVVQGWYDEYKDYTYEGKGCSA 174
T+ C H+ R F +G+N++ GS + + WY+E K Y + + C
Sbjct: 72 TKSCEFKHNPQLHSRIHPNFTALGENIWLGSLSIFSVSSAISAWYEEIKHYDFSTRKCRH 131
Query: 175 VCGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNFNDEAPYEVGAACS 354
VCGHYTQV WA SY +GCA C G FIC+YGPAGN+ PY+ GA CS
Sbjct: 132 VCGHYTQVVWADSYKLGCAVQLCPN--------GANFICDYGPAGNY-PTWPYKQGATCS 182
Query: 355 KCPKGTSCKNNLC 393
CPK C N+LC
Sbjct: 183 DCPKDDKCLNSLC 195
>sp|P60623|CRVP_TRIST Cysteine-rich secretory protein precursor (Stecrisp)
Length = 233
Score = 101 bits (252), Expect = 1e-21
Identities = 52/134 (38%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Frame = +1
Query: 16 KCIAGHDTYDDRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC---SAV 177
+CI H +Y+ R ++ G+N++ + +++ W+DEYKD+ Y G G +AV
Sbjct: 67 RCIESHSSYESRVIEGIK-CGENIYMSPYPMKWTDIIHAWHDEYKDFKY-GVGADPPNAV 124
Query: 178 CGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEVGAAC 351
GHYTQ+ W KSY +GCAA C S Y + F+C Y PAGNF PY G C
Sbjct: 125 TGHYTQIVWYKSYRIGCAAAYCP-----SSPYSYFFVCQYCPAGNFIGKTATPYTSGTPC 179
Query: 352 SKCPKGTSCKNNLC 393
CP + C N LC
Sbjct: 180 GDCP--SDCDNGLC 191
>sp|Q8JGT9|CRVP_RHATT Tigrin precursor
Length = 237
Score = 94.7 bits (234), Expect = 2e-19
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Frame = +1
Query: 16 KCIAGHDTYDDRQLDKFMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYEGKGCS---AV 177
+C H R L+ G+N+F S+ + ++Q WYDEY+++ Y G G + +V
Sbjct: 73 QCAYDHSPRSSRILNGIQ-CGENIFMASDPWAWTSIIQDWYDEYRNFVY-GVGANPPDSV 130
Query: 178 CGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEVGAAC 351
GHYTQ+ W KSY VGCAA C S Y + ++C Y PAGN + PY G C
Sbjct: 131 TGHYTQIVWYKSYLVGCAAAYCP-----SSLYNYFYVCQYCPAGNIQGSTSTPYASGPTC 185
Query: 352 SKCPKGTSCKNNLC 393
+ CP ++C N LC
Sbjct: 186 ADCP--SNCDNGLC 197
>sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 precursor (CRISP-3)
Length = 245
Score = 93.2 bits (230), Expect = 5e-19
Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 7/133 (5%)
Frame = +1
Query: 16 KCIAGHDTYDDRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYE--GKGCSAVC 180
KC+ H +DR + M G+N+F S ++ + +Q W+DE D+ Y K +AV
Sbjct: 78 KCLLQHSKAEDRAVGT-MKCGENLFMSSIPNSWSDAIQNWHDEVHDFKYGVGPKTPNAVV 136
Query: 181 GHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNFNDE--APYEVGAACS 354
GHYTQV W SY VGC C ++ G+ Y ++C Y PAGN+ ++ PYE G C+
Sbjct: 137 GHYTQVVWYSSYRVGCGIAYCPKQ--GTLKY--YYVCQYCPAGNYVNKINTPYEQGTPCA 192
Query: 355 KCPKGTSCKNNLC 393
+CP +C N LC
Sbjct: 193 RCP--GNCDNGLC 203
>sp|Q7ZZN9|CRVP_TRIJE Cysteine-rich venom protein precursor (TJ-CRVP)
Length = 240
Score = 92.0 bits (227), Expect = 1e-18
Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Frame = +1
Query: 19 CIAGHDTYDDRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC---SAVC 180
CI H + D R ++ G+N++ + +++ W+ EYKD+ Y G G AV
Sbjct: 75 CIESHSSRDSRVIEGIK-CGENIYMSPYPMKWTDIIHAWHGEYKDFKY-GVGAVPSDAVV 132
Query: 181 GHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEVGAACS 354
GHYTQ+ W KSY +GCAA C S Y + ++C Y PAGN PY G C
Sbjct: 133 GHYTQIVWYKSYRIGCAAAYCP-----SAEYSYFYVCQYCPAGNMIGKTATPYTSGPPCG 187
Query: 355 KCPKGTSCKNNLC 393
CP + C N LC
Sbjct: 188 DCP--SDCDNGLC 198
>sp|Q8JI39|CRVP_TRIFL Triflin precursor
Length = 240
Score = 92.0 bits (227), Expect = 1e-18
Identities = 49/134 (36%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Frame = +1
Query: 16 KCIAGHDTYDDRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC---SAV 177
+CI H + D R + G+N++ + + +++ W+ EYKD+ Y G G AV
Sbjct: 74 RCIESHSSRDSRVIGGIK-CGENIYMATYPAKWTDIIHAWHGEYKDFKY-GVGAVPSDAV 131
Query: 178 CGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNF--NDEAPYEVGAAC 351
GHYTQ+ W KSY GCAA C S Y + ++C Y PAGN PY+ G C
Sbjct: 132 IGHYTQIVWYKSYRAGCAAAYCP-----SSKYSYFYVCQYCPAGNIIGKTATPYKSGPPC 186
Query: 352 SKCPKGTSCKNNLC 393
CP + C N LC
Sbjct: 187 GDCP--SDCDNGLC 198
>sp|Q8AVA4|CRVP_PSEAU Pseudechetoxin precursor (PsTx)
Length = 238
Score = 91.7 bits (226), Expect = 1e-18
Identities = 50/133 (37%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Frame = +1
Query: 16 KCIAGHDTYDDRQLDKFMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYE--GKGCSAVC 180
+C H + R + K G+N+F S + VVQ WYDE K++ Y K +V
Sbjct: 74 RCTFAHSPPNKRTVGKLR-CGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVI 132
Query: 181 GHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNFNDE--APYEVGAACS 354
GHYTQV W KSY +GCA+ C +L++C Y PAGN PY+ G C+
Sbjct: 133 GHYTQVVWYKSYLIGCASAKCSSSK-------YLYVCQYCPAGNIRGSIATPYKSGPPCA 185
Query: 355 KCPKGTSCKNNLC 393
CP ++C N LC
Sbjct: 186 DCP--SACVNKLC 196
>sp|Q8UW11|CRVP2_LAPHA Cysteine-rich venom protein 2 precursor (CRVP)
Length = 238
Score = 90.9 bits (224), Expect = 3e-18
Identities = 49/133 (36%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Frame = +1
Query: 16 KCIAGHDTYDDRQLDKFMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYE--GKGCSAVC 180
+C H R + KF G+N+F S + VVQ WYDE K++ Y K +V
Sbjct: 74 RCTFAHSPEHTRTVGKFR-CGENIFMSSQPFAWSGVVQAWYDEIKNFVYGIGAKPPGSVI 132
Query: 181 GHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNFNDE--APYEVGAACS 354
GHYTQ+ W KS+ +GCA+ C +L++C Y PAGN PY+ G +C
Sbjct: 133 GHYTQIVWYKSHLLGCASAKCSSTK-------YLYVCQYCPAGNIRSSIATPYKSGPSCG 185
Query: 355 KCPKGTSCKNNLC 393
CP ++C N LC
Sbjct: 186 DCP--SACVNGLC 196
>sp|Q8JI40|CRVP_AGKHA Ablomin precursor
Length = 240
Score = 90.5 bits (223), Expect = 3e-18
Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Frame = +1
Query: 16 KCIAGHDTYDDRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC---SAV 177
+CI H + D R L+ G+N++ + +++ W+DEYK++ Y G G +AV
Sbjct: 74 RCIEDHSSPDSRVLEGIK-CGENIYMSPIPMKWTDIIHIWHDEYKNFKY-GIGADPPNAV 131
Query: 178 CGHYTQVAWAKSYAVGCAAVNCKEKTGGSFAYGWLFICNYGPAGNFNDE--APYEVGAAC 351
GH+TQ+ W KSY GCAA C S Y + ++C Y PAGN + PY G C
Sbjct: 132 SGHFTQIVWYKSYRAGCAAAYCP-----SSEYSYFYVCQYCPAGNMRGKTATPYTSGPPC 186
Query: 352 SKCPKGTSCKNNLC 393
CP ++C N LC
Sbjct: 187 GDCP--SACDNGLC 198
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,877,413
Number of Sequences: 369166
Number of extensions: 1450017
Number of successful extensions: 4975
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4838
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5218718490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)