Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_M10
(392 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P60623|CRVP_TRIST Cysteine-rich secretory protein precur... 97 9e-21
sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1... 94 1e-19
sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 pre... 94 1e-19
sp|Q7ZZN9|CRVP_TRIJE Cysteine-rich venom protein precursor ... 92 4e-19
sp|Q8JI39|CRVP_TRIFL Triflin precursor 92 4e-19
sp|Q8AVA4|CRVP_PSEAU Pseudechetoxin precursor (PsTx) 91 1e-18
sp|Q8JI40|CRVP_AGKHA Ablomin precursor 90 2e-18
sp|P79845|CRVP_TRIMU Cysteine-rich venom protein precursor ... 90 2e-18
sp|Q7ZT98|CRVP_OPHHA Ophanin precursor (Opharin) 89 3e-18
sp|Q8JGT9|CRVP_RHATT Tigrin precursor 89 4e-18
>sp|P60623|CRVP_TRIST Cysteine-rich secretory protein precursor (Stecrisp)
Length = 233
Score = 97.4 bits (241), Expect = 9e-21
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 6/129 (4%)
Frame = +3
Query: 24 PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 203
PE ++ ++ HN LRR V P A+NM+ M W A AE WA +CI H +Y+
Sbjct: 24 PEIQNEIVDLHNSLRRSV-------NPTASNMLRMEWYPEAADNAERWAYRCIESHSSYE 76
Query: 204 DRQLDKFMFVGQNMFAG---SNYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 365
R ++ G+N++ + +++ W+DEYKD+ Y G G +AV GHYTQ+ W
Sbjct: 77 SRVIEGIK-CGENIYMSPYPMKWTDIIHAWHDEYKDFKY-GVGADPPNAVTGHYTQIVWY 134
Query: 366 KSYAVGCAA 392
KSY +GCAA
Sbjct: 135 KSYRIGCAA 143
>sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1 precursor (GliPR 1) (RTVP-1
protein)
Length = 266
Score = 94.0 bits (232), Expect = 1e-19
Identities = 50/131 (38%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Frame = +3
Query: 27 EYKDFL---LKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDT 197
E +DF+ ++ HN R +V +P A++M+ M WD ALA A+ WA C H+T
Sbjct: 29 ENEDFIKDCVRIHNKFRSEV-------KPTASDMLYMTWDPALAQIAKAWASNCQFSHNT 81
Query: 198 Y---DDRQLDKFMFVGQNMFAGS----NYKEVVQGWYDEYKDYTYEGKGCSAVCGHYTQV 356
+ F +G+N++ GS + + WYDE +DY ++ + C VCGHYTQV
Sbjct: 82 RLKPPHKLHPNFTSLGENIWTGSVPIFSVSSAITNWYDEIQDYDFKTRICKKVCGHYTQV 141
Query: 357 AWAKSYAVGCA 389
WA SY VGCA
Sbjct: 142 VWADSYKVGCA 152
>sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 precursor (CRISP-3)
Length = 245
Score = 94.0 bits (232), Expect = 1e-19
Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Frame = +3
Query: 18 TPPEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDT 197
T E + ++ HNDLRR V+ P A+NM++M WD A A+ WA KC+ H
Sbjct: 33 TKSEVQKEIVNKHNDLRRTVS-------PLASNMLKMQWDSKTATNAQNWANKCLLQHSK 85
Query: 198 YDDRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTY--EGKGCSAVCGHYTQVAW 362
+DR + M G+N+F S ++ + +Q W+DE D+ Y K +AV GHYTQV W
Sbjct: 86 AEDRAVGT-MKCGENLFMSSIPNSWSDAIQNWHDEVHDFKYGVGPKTPNAVVGHYTQVVW 144
Query: 363 AKSYAVGC 386
SY VGC
Sbjct: 145 YSSYRVGC 152
>sp|Q7ZZN9|CRVP_TRIJE Cysteine-rich venom protein precursor (TJ-CRVP)
Length = 240
Score = 92.0 bits (227), Expect = 4e-19
Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Frame = +3
Query: 24 PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 203
PE ++ ++ HN LRR V P A+NM++M W A AE WA CI H + D
Sbjct: 31 PEIQNEIIDLHNSLRRSV-------NPTASNMLKMEWYPEAAANAERWAYGCIESHSSRD 83
Query: 204 DRQLDKFMFVGQNMFAGS---NYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 365
R ++ G+N++ + +++ W+ EYKD+ Y G G AV GHYTQ+ W
Sbjct: 84 SRVIEGIK-CGENIYMSPYPMKWTDIIHAWHGEYKDFKY-GVGAVPSDAVVGHYTQIVWY 141
Query: 366 KSYAVGCAA 392
KSY +GCAA
Sbjct: 142 KSYRIGCAA 150
>sp|Q8JI39|CRVP_TRIFL Triflin precursor
Length = 240
Score = 92.0 bits (227), Expect = 4e-19
Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Frame = +3
Query: 24 PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 203
PE ++ ++ HN LRR V P A+NM++M W A AE WA +CI H + D
Sbjct: 31 PEIQNEIIDLHNSLRRSV-------NPTASNMLKMEWYPEAAANAERWAYRCIESHSSRD 83
Query: 204 DRQLDKFMFVGQNMFAG---SNYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 365
R + G+N++ + + +++ W+ EYKD+ Y G G AV GHYTQ+ W
Sbjct: 84 SRVIGGIK-CGENIYMATYPAKWTDIIHAWHGEYKDFKY-GVGAVPSDAVIGHYTQIVWY 141
Query: 366 KSYAVGCAA 392
KSY GCAA
Sbjct: 142 KSYRAGCAA 150
>sp|Q8AVA4|CRVP_PSEAU Pseudechetoxin precursor (PsTx)
Length = 238
Score = 90.5 bits (223), Expect = 1e-18
Identities = 50/131 (38%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Frame = +3
Query: 15 STPPEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHD 194
S Y+ ++ HN LRR V +P A NM++M W+ A A+ WA +C H
Sbjct: 28 SNKKNYQKEIVDKHNALRRSV-------KPTARNMLQMKWNSRAAQNAKRWANRCTFAHS 80
Query: 195 TYDDRQLDKFMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYE--GKGCSAVCGHYTQVA 359
+ R + K G+N+F S + VVQ WYDE K++ Y K +V GHYTQV
Sbjct: 81 PPNKRTVGKLR-CGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVV 139
Query: 360 WAKSYAVGCAA 392
W KSY +GCA+
Sbjct: 140 WYKSYLIGCAS 150
>sp|Q8JI40|CRVP_AGKHA Ablomin precursor
Length = 240
Score = 89.7 bits (221), Expect = 2e-18
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Frame = +3
Query: 24 PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 203
PE ++ ++ HN LRR V P A+NM++M W A AE WA +CI H + D
Sbjct: 31 PEIQNEIVDLHNSLRRSV-------NPTASNMLKMEWYPEAAANAERWAYRCIEDHSSPD 83
Query: 204 DRQLDKFMFVGQNMFAG---SNYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 365
R L+ G+N++ + +++ W+DEYK++ Y G G +AV GH+TQ+ W
Sbjct: 84 SRVLEGIK-CGENIYMSPIPMKWTDIIHIWHDEYKNFKY-GIGADPPNAVSGHFTQIVWY 141
Query: 366 KSYAVGCAA 392
KSY GCAA
Sbjct: 142 KSYRAGCAA 150
>sp|P79845|CRVP_TRIMU Cysteine-rich venom protein precursor (TM-CRVP)
Length = 240
Score = 89.7 bits (221), Expect = 2e-18
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Frame = +3
Query: 24 PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 203
PE ++ ++ HN LRR V P A+NM++M W A AE WA +CI H + D
Sbjct: 31 PEIQNEIIDLHNSLRRSV-------NPTASNMLKMEWYPEAAANAERWAYRCIESHSSRD 83
Query: 204 DRQLDKFMFVGQNMFAG---SNYKEVVQGWYDEYKDYTYEGKGC---SAVCGHYTQVAWA 365
R + G+N++ + + +++ W+ EYKD+ Y G G +A GHYTQ+ W
Sbjct: 84 SRVIGGIK-CGENIYMSPYPAKWTDIIHAWHGEYKDFKY-GVGAVPSNAATGHYTQIVWY 141
Query: 366 KSYAVGCAA 392
KSY GCAA
Sbjct: 142 KSYRGGCAA 150
>sp|Q7ZT98|CRVP_OPHHA Ophanin precursor (Opharin)
Length = 239
Score = 89.0 bits (219), Expect = 3e-18
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Frame = +3
Query: 42 LLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYDDRQLDK 221
++ HN LRR V+ P A+NM++M W A AE WA C GH R L+
Sbjct: 36 IVDLHNSLRRSVS-------PTASNMLKMQWYPEAASNAERWASNCNLGHSPDYSRVLEG 88
Query: 222 FMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYEGKGCS---AVCGHYTQVAWAKSYAVG 383
+ G+N++ SN + E++Q W+DEYK++ Y G G + +V GHYTQ+ W K+Y +G
Sbjct: 89 -IECGENIYMSSNPRAWTEIIQLWHDEYKNFVY-GVGANPPGSVTGHYTQIVWYKTYRIG 146
Query: 384 CA 389
CA
Sbjct: 147 CA 148
>sp|Q8JGT9|CRVP_RHATT Tigrin precursor
Length = 237
Score = 88.6 bits (218), Expect = 4e-18
Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Frame = +3
Query: 24 PEYKDFLLKAHNDLRRDVALGKTPNQPGAANMIEMVWDDALAGKAEEWAGKCIAGHDTYD 203
P + ++ HN RR V +P A NM++M W A AE WA +C H
Sbjct: 30 PGKQQEIVNIHNSFRRSV-------RPTARNMLKMEWYSEAASNAERWAYQCAYDHSPRS 82
Query: 204 DRQLDKFMFVGQNMFAGSN---YKEVVQGWYDEYKDYTYEGKGCS---AVCGHYTQVAWA 365
R L+ G+N+F S+ + ++Q WYDEY+++ Y G G + +V GHYTQ+ W
Sbjct: 83 SRILNGIQ-CGENIFMASDPWAWTSIIQDWYDEYRNFVY-GVGANPPDSVTGHYTQIVWY 140
Query: 366 KSYAVGCAA 392
KSY VGCAA
Sbjct: 141 KSYLVGCAA 149
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,422,138
Number of Sequences: 369166
Number of extensions: 836733
Number of successful extensions: 3193
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3081
length of database: 68,354,980
effective HSP length: 96
effective length of database: 50,620,420
effective search space used: 1721094280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)