Planarian EST Database

DrC_01118

Cluster detail
GO Category :
Consensus Sequence :
>DrC_01118 ACATCAAACATTAATAGTTGTAAAATGGTTATTCAGAAGAAAATCAATTACGCAGAAAAA TTGAAAACCAAATTTTCACAATATGAAAAGATATTCATTGTTAATGCTGATAACGTATCT AGTCAGCAAATGCAAAATGTTCGAAAGGAGTTAAGAAACTCAGCTGAAATTGTTTTGGGA AAAAATACAATGATGAAATTCGTCATTACAAAAAACAAAGCGACCAATCCTGATTTGCTG AAATTGTTTCCTCATCTTAAAGGAAATGTTGGTTTTGTTTTTACTAATGGTGATCTGAAT GCAGTTAAAGACATTATTTTGTCACAAAAAATCCAAGCTCCAGCTAAAGCAGATGCTGTT GCACCTGTTAGTGTAATGGTTCCTAAACAACTTACAACTTTGGGCCCTGAAAAGACTTCT TTCTTTCAAGCTTTGCAAATTCCTACAAAAATCACCAGGGGAACTATTGAAATCATCAAT GATGTGGATTTAATAAAAGCTGGTGACATTGTTAAGCAATCCGAAGCCCAACTTTTACAA ATGTTGAAAATATTCCCATTTCAATATGGGCTAAAAATACAACAAATTTATGAAAATGGT TCATGTTATAGTCCCGACGCTTTAGATATAACCGAAGATGATATATTGAGAGGTTTCATG GAATCAACACAAAAAGTTGCTGCAGTTTCGTTGGCTCTTAATAAGCCGACTCTTGCGTCG GTGCCACATATTATTGCTAATACAATCAAAGCAGTTATAGGATTATCTGTTGTTACGGAT TATAATTTGAAAGAAGCGGAAGGCATTAAAGAATATCTTAAAGATCCTACAAAATTTGCA TCGACAACGGTTGCAGCAGCCGCGCCAGTTGCGGAGAAACCCGTTGTCGTTGAAGAAGCA GCCAAATCTGAGTCAGAAAGTGATGGCAGCATTGGAATGGGACTGTTTGATTGAGATAAA TAAATTGTTTTGGATTGGGAATTAGTTTTTTTTTAAC

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01118
         (997 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P19889|RLA0_DROME  60S acidic ribosomal protein P0 (DNA-(...   285   1e-76
sp|Q9U3U0|RLA0_CERCA  60S acidic ribosomal protein P0 (CcP0)      281   2e-75
sp|Q90YX1|RLA0_ICTPU  60S acidic ribosomal protein P0 (L10E)      280   5e-75
sp|P05388|RLA0_HUMAN  60S acidic ribosomal protein P0 (L10E)      278   2e-74
sp|P19945|RLA0_RAT  60S acidic ribosomal protein P0 (L10E)        278   2e-74
sp|P47826|RLA0_CHICK  60S acidic ribosomal protein P0 (L10E)      278   2e-74
sp|Q93572|RLA0_CAEEL  60S acidic ribosomal protein P0             277   3e-74
sp|Q9DG68|RLA0_RANSY  60S acidic ribosomal protein P0 (L10E)      277   3e-74
sp|Q9PV90|RLA0_BRARE  60S acidic ribosomal protein P0 (L10E)      276   7e-74
sp|Q95140|RLA0_BOVIN  60S acidic ribosomal protein P0 (L10E)      276   9e-74

>sp|P19889|RLA0_DROME 60S acidic ribosomal protein P0 (DNA-(apurinic or apyrimidinic
           site) lyase) (Apurinic-apyrimidinic endonuclease)
          Length = 317

 Score =  285 bits (729), Expect = 1e-76
 Identities = 142/266 (53%), Positives = 186/266 (69%)
 Frame = +1

Query: 40  KINYAEKLKTKFSQYEKIFIVNADNVSSQQMQNVRKELRNSAEIVLGKNTMMKFVITKNK 219
           K  Y  K+   F ++ K FIV ADNV S+QMQN+R  LR  A +++GKNTMM+  I  + 
Sbjct: 10  KAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHL 69

Query: 220 ATNPDLLKLFPHLKGNVGFVFTNGDLNAVKDIILSQKIQAPAKADAVAPVSVMVPKQLTT 399
             NP L KL PH+KGNVGFVFT GDL  V+D +L  K++APA+  A+AP+ V++P Q T 
Sbjct: 70  ENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTG 129

Query: 400 LGPEKTSFFQALQIPTKITRGTIEIINDVDLIKAGDIVKQSEAQLLQMLKIFPFQYGLKI 579
           LGPEKTSFFQAL IPTKI++GTIEIINDV ++K GD V  SEA LL ML I PF YGL +
Sbjct: 130 LGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIV 189

Query: 580 QQIYENGSCYSPDALDITEDDILRGFMESTQKVAAVSLALNKPTLASVPHIIANTIKAVI 759
            Q+Y++GS +SP+ LDI  +D+   F +    +AAV L++  PT+AS PH IAN  K ++
Sbjct: 190 NQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLL 249

Query: 760 GLSVVTDYNLKEAEGIKEYLKDPTKF 837
            ++  T+   KEA  IKEY+KDP+KF
Sbjct: 250 AIAATTEVEFKEATTIKEYIKDPSKF 275

>sp|Q9U3U0|RLA0_CERCA 60S acidic ribosomal protein P0 (CcP0)
          Length = 317

 Score =  281 bits (720), Expect = 2e-75
 Identities = 142/266 (53%), Positives = 184/266 (69%)
 Frame = +1

Query: 40  KINYAEKLKTKFSQYEKIFIVNADNVSSQQMQNVRKELRNSAEIVLGKNTMMKFVITKNK 219
           K  Y  K+   F +Y K FIV ADNV S+QMQN+R  LR    +++GKNTMM+  I  + 
Sbjct: 10  KAQYFLKVVELFDEYPKCFIVGADNVGSKQMQNIRTSLRGLGVVLMGKNTMMRKAIRGHL 69

Query: 220 ATNPDLLKLFPHLKGNVGFVFTNGDLNAVKDIILSQKIQAPAKADAVAPVSVMVPKQLTT 399
             N  L KL PH+KGNVGFVFT GDL  V+D +L  K++APA+A A+AP+ V++P Q T 
Sbjct: 70  ENNAQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARAGAIAPLPVIIPAQNTG 129

Query: 400 LGPEKTSFFQALQIPTKITRGTIEIINDVDLIKAGDIVKQSEAQLLQMLKIFPFQYGLKI 579
           LGPEKTSFFQAL IPTKI++GTIEIINDV ++K GD V  SEA LL ML I PF YGL I
Sbjct: 130 LGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLAI 189

Query: 580 QQIYENGSCYSPDALDITEDDILRGFMESTQKVAAVSLALNKPTLASVPHIIANTIKAVI 759
            Q+Y++GS +SP+ LDI  +D+   F      +AAVSL +  PT+AS PH IAN  K ++
Sbjct: 190 TQVYDSGSIFSPEILDIKPEDLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLL 249

Query: 760 GLSVVTDYNLKEAEGIKEYLKDPTKF 837
            ++  T+   K+A  IKE++KDP+KF
Sbjct: 250 AIAASTEVEFKQAATIKEFIKDPSKF 275

>sp|Q90YX1|RLA0_ICTPU 60S acidic ribosomal protein P0 (L10E)
          Length = 317

 Score =  280 bits (716), Expect = 5e-75
 Identities = 144/266 (54%), Positives = 186/266 (69%)
 Frame = +1

Query: 40  KINYAEKLKTKFSQYEKIFIVNADNVSSQQMQNVRKELRNSAEIVLGKNTMMKFVITKNK 219
           K NY  K+    + Y K FIV ADNV S+QMQ +R  LR  A +++GKNTMM+  I  + 
Sbjct: 10  KSNYFLKIIQLLNDYPKCFIVGADNVGSKQMQTIRLSLRGKAIVLMGKNTMMRKAIRGHL 69

Query: 220 ATNPDLLKLFPHLKGNVGFVFTNGDLNAVKDIILSQKIQAPAKADAVAPVSVMVPKQLTT 399
             NP L KL PH++GNVGFVFT  DL  V+D++L+ K+ A A+A A+AP  V VP Q T 
Sbjct: 70  ENNPALEKLLPHIRGNVGFVFTKEDLPEVRDMLLANKVPAAARAGAIAPCEVTVPAQNTG 129

Query: 400 LGPEKTSFFQALQIPTKITRGTIEIINDVDLIKAGDIVKQSEAQLLQMLKIFPFQYGLKI 579
           LGPEKTSFFQAL I TKI+RGTIEI++DV LI+ GD V  SEA LL ML I PF YGL I
Sbjct: 130 LGPEKTSFFQALGITTKISRGTIEILSDVQLIRPGDKVGASEATLLNMLNISPFSYGLII 189

Query: 580 QQIYENGSCYSPDALDITEDDILRGFMESTQKVAAVSLALNKPTLASVPHIIANTIKAVI 759
           QQ+Y+NGS YSP+ LDITED + + F+E  + +A+V L +  PTLAS+PH I N  K V+
Sbjct: 190 QQVYDNGSVYSPEVLDITEDALHKRFLEGVRNIASVCLQIGYPTLASIPHSIINGYKRVL 249

Query: 760 GLSVVTDYNLKEAEGIKEYLKDPTKF 837
            ++V TDY+   A+ +K +L DP++F
Sbjct: 250 RVAVETDYSFPMADKVKAFLADPSRF 275

>sp|P05388|RLA0_HUMAN 60S acidic ribosomal protein P0 (L10E)
          Length = 317

 Score =  278 bits (711), Expect = 2e-74
 Identities = 144/266 (54%), Positives = 182/266 (68%)
 Frame = +1

Query: 40  KINYAEKLKTKFSQYEKIFIVNADNVSSQQMQNVRKELRNSAEIVLGKNTMMKFVITKNK 219
           K NY  K+      Y K FIV ADNV S+QMQ +R  LR  A +++GKNTMM+  I  + 
Sbjct: 10  KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 69

Query: 220 ATNPDLLKLFPHLKGNVGFVFTNGDLNAVKDIILSQKIQAPAKADAVAPVSVMVPKQLTT 399
             NP L KL PH++GNVGFVFT  DL  ++D++L+ K+ A A+A A+AP  V VP Q T 
Sbjct: 70  ENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTG 129

Query: 400 LGPEKTSFFQALQIPTKITRGTIEIINDVDLIKAGDIVKQSEAQLLQMLKIFPFQYGLKI 579
           LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF +GL I
Sbjct: 130 LGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVI 189

Query: 580 QQIYENGSCYSPDALDITEDDILRGFMESTQKVAAVSLALNKPTLASVPHIIANTIKAVI 759
           QQ+++NGS Y+P+ LDITE+ +   F+E  + VA+V L +  PT+ASVPH I N  K V+
Sbjct: 190 QQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249

Query: 760 GLSVVTDYNLKEAEGIKEYLKDPTKF 837
            LSV TDY    AE +K +L DP+ F
Sbjct: 250 ALSVETDYTFPLAEKVKAFLADPSAF 275

>sp|P19945|RLA0_RAT 60S acidic ribosomal protein P0 (L10E)
          Length = 317

 Score =  278 bits (710), Expect = 2e-74
 Identities = 145/266 (54%), Positives = 181/266 (68%)
 Frame = +1

Query: 40  KINYAEKLKTKFSQYEKIFIVNADNVSSQQMQNVRKELRNSAEIVLGKNTMMKFVITKNK 219
           K NY  K+      Y K FIV ADNV S+QMQ +R  LR  A +++GKNTMM+  I  + 
Sbjct: 10  KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 69

Query: 220 ATNPDLLKLFPHLKGNVGFVFTNGDLNAVKDIILSQKIQAPAKADAVAPVSVMVPKQLTT 399
             NP L KL PH++GNVGFVFT  DL  ++D++L+ K+ A A+A A+AP  V VP Q T 
Sbjct: 70  ENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTG 129

Query: 400 LGPEKTSFFQALQIPTKITRGTIEIINDVDLIKAGDIVKQSEAQLLQMLKIFPFQYGLKI 579
           LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF +GL I
Sbjct: 130 LGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLII 189

Query: 580 QQIYENGSCYSPDALDITEDDILRGFMESTQKVAAVSLALNKPTLASVPHIIANTIKAVI 759
           QQ+++NGS YSP+ LDITE  +   F+E  + VA+V L +  PT+ASVPH I N  K V+
Sbjct: 190 QQVFDNGSIYSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249

Query: 760 GLSVVTDYNLKEAEGIKEYLKDPTKF 837
            LSV TDY    AE +K +L DP+ F
Sbjct: 250 ALSVETDYTFPLAEKVKAFLADPSAF 275

>sp|P47826|RLA0_CHICK 60S acidic ribosomal protein P0 (L10E)
          Length = 316

 Score =  278 bits (710), Expect = 2e-74
 Identities = 141/266 (53%), Positives = 183/266 (68%)
 Frame = +1

Query: 40  KINYAEKLKTKFSQYEKIFIVNADNVSSQQMQNVRKELRNSAEIVLGKNTMMKFVITKNK 219
           K NY  K+      Y K F+V ADNV S+QMQ +R  LR  A +++GKNTMM+  I  + 
Sbjct: 10  KSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 69

Query: 220 ATNPDLLKLFPHLKGNVGFVFTNGDLNAVKDIILSQKIQAPAKADAVAPVSVMVPKQLTT 399
             NP L KL PH++GNVGFVFT  DL  ++D++L+ K+ A A+A A+AP  V VP Q T 
Sbjct: 70  ENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCDVTVPAQNTG 129

Query: 400 LGPEKTSFFQALQIPTKITRGTIEIINDVDLIKAGDIVKQSEAQLLQMLKIFPFQYGLKI 579
           LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF +GL I
Sbjct: 130 LGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVI 189

Query: 580 QQIYENGSCYSPDALDITEDDILRGFMESTQKVAAVSLALNKPTLASVPHIIANTIKAVI 759
           QQ+++NGS Y+P+ LDITE+ + + F+E  + VA+V L +  PT+ASVPH I N  K V+
Sbjct: 190 QQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVL 249

Query: 760 GLSVVTDYNLKEAEGIKEYLKDPTKF 837
            ++V TDY    AE +K +L DP+ F
Sbjct: 250 AVAVETDYTFPLAEKVKAFLADPSAF 275

>sp|Q93572|RLA0_CAEEL 60S acidic ribosomal protein P0
          Length = 312

 Score =  277 bits (709), Expect = 3e-74
 Identities = 137/266 (51%), Positives = 188/266 (70%)
 Frame = +1

Query: 40  KINYAEKLKTKFSQYEKIFIVNADNVSSQQMQNVRKELRNSAEIVLGKNTMMKFVITKNK 219
           K NY  KL   F +Y K  +V  DNV S+QMQ +R+ +R  AEI++GKNTM++  +  + 
Sbjct: 10  KANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHL 69

Query: 220 ATNPDLLKLFPHLKGNVGFVFTNGDLNAVKDIILSQKIQAPAKADAVAPVSVMVPKQLTT 399
             NP L KL PH+  NVGFVFT  DL  ++  +L  +  APAKA A+AP  V +P Q T 
Sbjct: 70  GKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTG 129

Query: 400 LGPEKTSFFQALQIPTKITRGTIEIINDVDLIKAGDIVKQSEAQLLQMLKIFPFQYGLKI 579
           +GPEKTSFFQALQIPTKI RGTIEI+NDV LIK GD V  SE+ LL ML + PF YGL +
Sbjct: 130 MGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVV 189

Query: 580 QQIYENGSCYSPDALDITEDDILRGFMESTQKVAAVSLALNKPTLASVPHIIANTIKAVI 759
           +Q+Y++G+ Y+P+ LD+T +++ + F+   + VA+VSLA+N PTLASV H +AN ++ ++
Sbjct: 190 RQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNML 249

Query: 760 GLSVVTDYNLKEAEGIKEYLKDPTKF 837
           G++ VTD + KEAE IK ++ DP+KF
Sbjct: 250 GVAAVTDVSFKEAETIKAFIADPSKF 275

>sp|Q9DG68|RLA0_RANSY 60S acidic ribosomal protein P0 (L10E)
          Length = 315

 Score =  277 bits (709), Expect = 3e-74
 Identities = 144/266 (54%), Positives = 182/266 (68%)
 Frame = +1

Query: 40  KINYAEKLKTKFSQYEKIFIVNADNVSSQQMQNVRKELRNSAEIVLGKNTMMKFVITKNK 219
           K NY  K+      Y K FIV ADNV S+QMQ +R  LR  A +++GKNTMM+  I  + 
Sbjct: 10  KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 69

Query: 220 ATNPDLLKLFPHLKGNVGFVFTNGDLNAVKDIILSQKIQAPAKADAVAPVSVMVPKQLTT 399
             N  L KL PH+KGNVGFVFT  DL  V+D++L+ K+ A A+A A+AP  V VP Q T 
Sbjct: 70  ENNSALEKLLPHIKGNVGFVFTKEDLAEVRDMLLANKVPASARAGAIAPCDVTVPAQNTG 129

Query: 400 LGPEKTSFFQALQIPTKITRGTIEIINDVDLIKAGDIVKQSEAQLLQMLKIFPFQYGLKI 579
           LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA LL ML I PF +GL I
Sbjct: 130 LGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLII 189

Query: 580 QQIYENGSCYSPDALDITEDDILRGFMESTQKVAAVSLALNKPTLASVPHIIANTIKAVI 759
           QQ+Y+NGS YSP+ LDITED +   F+E  + +A+V L +  PT+ASVPH + N  K V+
Sbjct: 190 QQVYDNGSIYSPEVLDITEDALRARFLEGVRNIASVCLQIGYPTVASVPHSVVNGYKRVL 249

Query: 760 GLSVVTDYNLKEAEGIKEYLKDPTKF 837
            L+V TDY+   A+ +K +L DP+ F
Sbjct: 250 ALAVETDYSFPLADKVKAFLADPSAF 275

>sp|Q9PV90|RLA0_BRARE 60S acidic ribosomal protein P0 (L10E)
          Length = 319

 Score =  276 bits (706), Expect = 7e-74
 Identities = 145/269 (53%), Positives = 183/269 (68%), Gaps = 3/269 (1%)
 Frame = +1

Query: 40  KINYAEKLKTKFSQYEKIFIVNADNVSSQQMQNVRKELRNSAEIVLGKNTMMKFVITKNK 219
           K NY  K+      + K FIV ADNV S+QMQ +R  LR  A +++GKNTMM+  I  + 
Sbjct: 10  KSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHL 69

Query: 220 ATNPDLLKLFPHLKGNVGFVFTNGDLNAVKDIILSQKIQAPAKADAVAPVSVMVPKQLTT 399
             NP L +L PH++GNVGFVFT  DL  V+D++L+ K+ A A+A A+AP  V VP Q T 
Sbjct: 70  ENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNTG 129

Query: 400 LGPEKTSFFQALQIPTKITRGTIEIINDVDLIKAGDIVKQSEAQL---LQMLKIFPFQYG 570
           LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD V  SEA L   L ML I PF YG
Sbjct: 130 LGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYG 189

Query: 571 LKIQQIYENGSCYSPDALDITEDDILRGFMESTQKVAAVSLALNKPTLASVPHIIANTIK 750
           L IQQ+Y+NGS YSP+ LDITED + + F++  + +A+V L +  PTLAS+PH I N  K
Sbjct: 190 LIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYK 249

Query: 751 AVIGLSVVTDYNLKEAEGIKEYLKDPTKF 837
            V+ ++V TDY    AE +K YL DPT F
Sbjct: 250 RVLAVTVETDYTFPLAEKVKAYLADPTAF 278

>sp|Q95140|RLA0_BOVIN 60S acidic ribosomal protein P0 (L10E)
          Length = 309

 Score =  276 bits (705), Expect = 9e-74
 Identities = 143/266 (53%), Positives = 181/266 (68%)
 Frame = +1

Query: 40  KINYAEKLKTKFSQYEKIFIVNADNVSSQQMQNVRKELRNSAEIVLGKNTMMKFVITKNK 219
           K NY  K+      Y K FIV ADNV S+QMQ +R  LR  A +++GKNTMM+  I  + 
Sbjct: 1   KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 60

Query: 220 ATNPDLLKLFPHLKGNVGFVFTNGDLNAVKDIILSQKIQAPAKADAVAPVSVMVPKQLTT 399
             NP L KL PH++GNVGFVFT  DL  ++D++L+ K+ A A+A A+AP  V VP Q T 
Sbjct: 61  ENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTG 120

Query: 400 LGPEKTSFFQALQIPTKITRGTIEIINDVDLIKAGDIVKQSEAQLLQMLKIFPFQYGLKI 579
           LGPEKTSFFQAL I TKI+RGTIEI++DV LIK GD    SEA LL ML I PF +GL I
Sbjct: 121 LGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKEGASEATLLNMLNISPFSFGLVI 180

Query: 580 QQIYENGSCYSPDALDITEDDILRGFMESTQKVAAVSLALNKPTLASVPHIIANTIKAVI 759
           QQ+++NGS Y+P+ LDITE+ +   F+E  + VA+V L +  PT+ASVPH I N  K V+
Sbjct: 181 QQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 240

Query: 760 GLSVVTDYNLKEAEGIKEYLKDPTKF 837
            LSV TDY    AE +K +L DP+ F
Sbjct: 241 ALSVETDYTFPLAEKVKAFLADPSAF 266

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,280,913
Number of Sequences: 369166
Number of extensions: 1871736
Number of successful extensions: 5209
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5171
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10526866900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_01118

Planaria EST Database

DrC_01118

BLASTX 2.2.13 [Nov-27-2005]

Cluster detail