Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00382 (1047 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P29520|EF1A_BOMMO Elongation factor 1-alpha (EF-1-alpha) 411 e-114 sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alph... 409 e-114 sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alp... 408 e-113 sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alp... 408 e-113 sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alp... 408 e-113 sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic fo... 407 e-113 sp|P02993|EF1A_ARTSA Elongation factor 1-alpha (EF-1-alpha) 406 e-113 sp|P08736|EF11_DROME Elongation factor 1-alpha (EF-1-alpha)... 406 e-113 sp|P05303|EF12_DROME Elongation factor 1-alpha (EF-1-alpha) 404 e-112 sp|P17507|EF1A2_XENLA Elongation factor 1-alpha, oocyte for... 397 e-110
>sp|P29520|EF1A_BOMMO Elongation factor 1-alpha (EF-1-alpha) Length = 463 Score = 411 bits (1057), Expect = e-114 Identities = 194/222 (87%), Positives = 211/222 (95%) Frame = +2 Query: 347 MPSDKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 526 M +KTHINIVVIGHVDSGKST+TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 527 DKLKAERERGITIDIALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGT 706 DKLKAERERGITIDIALWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAGT Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120 Query: 707 GEFEAGISKNGQTREHALLAYTLGVKQMIVGVNKMDSTEPPFSDKRFEEIKKEVGSYLKK 886 GEFEAGISKNGQTREHALLA+TLGVKQ+IVGVNKMDSTEPP+S+ RFEEIKKEV SY+KK Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 180 Query: 887 VGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAK 1012 +GY P AVAFVPISGW+GDNM+E ST MPW+KGW++ RK K Sbjct: 181 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGK 222
>sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor Tu) (EF-Tu) Length = 462 Score = 409 bits (1050), Expect = e-114 Identities = 191/220 (86%), Positives = 210/220 (95%) Frame = +2 Query: 347 MPSDKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 526 M +KTHINIVVIGHVDSGKST+TGHLIYKCGGIDKRTIEKFEKEA EMGKGSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL 60 Query: 527 DKLKAERERGITIDIALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGT 706 DKLKAERERGITIDI+LWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAG Sbjct: 61 DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV 120 Query: 707 GEFEAGISKNGQTREHALLAYTLGVKQMIVGVNKMDSTEPPFSDKRFEEIKKEVGSYLKK 886 GEFEAGISKNGQTREHALLAYTLGVKQ+IVGVNKMDSTEPP+S KR+EEI KEV +Y+KK Sbjct: 121 GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK 180 Query: 887 VGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKN 1006 +GY PD VAFVPISGWNGDNM+E S+NMPW+KGW++TRK+ Sbjct: 181 IGYNPDTVAFVPISGWNGDNMLEPSSNMPWFKGWKVTRKD 220
>sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) sp|P62630|EF1A1_RAT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) sp|P62629|EF1A1_CRIGR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) Length = 462 Score = 408 bits (1049), Expect = e-113 Identities = 191/220 (86%), Positives = 209/220 (95%) Frame = +2 Query: 347 MPSDKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 526 M +KTHINIVVIGHVDSGKST+TGHLIYKCGGIDKRTIEKFEKEA EMGKGSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL 60 Query: 527 DKLKAERERGITIDIALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGT 706 DKLKAERERGITIDI+LWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAG Sbjct: 61 DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV 120 Query: 707 GEFEAGISKNGQTREHALLAYTLGVKQMIVGVNKMDSTEPPFSDKRFEEIKKEVGSYLKK 886 GEFEAGISKNGQTREHALLAYTLGVKQ+IVGVNKMDSTEPP+S KR+EEI KEV +Y+KK Sbjct: 121 GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK 180 Query: 887 VGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKN 1006 +GY PD VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ Sbjct: 181 IGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKD 220
>sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) sp|Q5R1X2|EF1A1_PANTR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) sp|P68103|EF1A1_BOVIN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) sp|P68104|EF1A1_HUMAN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) sp|Q66RN5|EF1A1_FELCA Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) Length = 462 Score = 408 bits (1049), Expect = e-113 Identities = 191/220 (86%), Positives = 209/220 (95%) Frame = +2 Query: 347 MPSDKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 526 M +KTHINIVVIGHVDSGKST+TGHLIYKCGGIDKRTIEKFEKEA EMGKGSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL 60 Query: 527 DKLKAERERGITIDIALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGT 706 DKLKAERERGITIDI+LWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAG Sbjct: 61 DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV 120 Query: 707 GEFEAGISKNGQTREHALLAYTLGVKQMIVGVNKMDSTEPPFSDKRFEEIKKEVGSYLKK 886 GEFEAGISKNGQTREHALLAYTLGVKQ+IVGVNKMDSTEPP+S KR+EEI KEV +Y+KK Sbjct: 121 GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK 180 Query: 887 VGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKN 1006 +GY PD VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ Sbjct: 181 IGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKD 220
>sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) Length = 462 Score = 408 bits (1049), Expect = e-113 Identities = 191/220 (86%), Positives = 209/220 (95%) Frame = +2 Query: 347 MPSDKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 526 M +KTHINIVVIGHVDSGKST+TGHLIYKCGGIDKRTIEKFEKEA EMGKGSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL 60 Query: 527 DKLKAERERGITIDIALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGT 706 DKLKAERERGITIDI+LWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAG Sbjct: 61 DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV 120 Query: 707 GEFEAGISKNGQTREHALLAYTLGVKQMIVGVNKMDSTEPPFSDKRFEEIKKEVGSYLKK 886 GEFEAGISKNGQTREHALLAYTLGVKQ+IVGVNKMDSTEPP+S KR+EEI KEV +Y+KK Sbjct: 121 GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK 180 Query: 887 VGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKN 1006 +GY PD VAFVPISGWNGDNM+E S NMPW+KGW++TRK+ Sbjct: 181 IGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKD 220
>sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic form (EF-1-alpha-S) Length = 462 Score = 407 bits (1047), Expect = e-113 Identities = 191/219 (87%), Positives = 208/219 (94%) Frame = +2 Query: 347 MPSDKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 526 M +KTHINIVVIGHVDSGKST+TGHLIYKCGGIDKRTIEKFEKEA EMGKGSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL 60 Query: 527 DKLKAERERGITIDIALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGT 706 DKLKAERERGITIDI+LWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAG Sbjct: 61 DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV 120 Query: 707 GEFEAGISKNGQTREHALLAYTLGVKQMIVGVNKMDSTEPPFSDKRFEEIKKEVGSYLKK 886 GEFEAGISKNGQTREHALLAYTLGVKQ+IVG+NKMDSTEPP+S KR+EEI KEV +Y+KK Sbjct: 121 GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPPYSQKRYEEIVKEVSTYIKK 180 Query: 887 VGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRK 1003 +GY PD VAFVPISGWNGDNM+E S NMPW+KGW+ITRK Sbjct: 181 IGYNPDTVAFVPISGWNGDNMLEPSPNMPWFKGWKITRK 219
>sp|P02993|EF1A_ARTSA Elongation factor 1-alpha (EF-1-alpha) Length = 462 Score = 406 bits (1043), Expect = e-113 Identities = 193/222 (86%), Positives = 206/222 (92%) Frame = +2 Query: 347 MPSDKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 526 M +K HINIVVIGHVDSGKST+TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 527 DKLKAERERGITIDIALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGT 706 DKLKAERERGITIDIALWKFET K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAG Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV 120 Query: 707 GEFEAGISKNGQTREHALLAYTLGVKQMIVGVNKMDSTEPPFSDKRFEEIKKEVGSYLKK 886 GEFEAGISKNGQTREHALLAYTLGVKQ+IVGVNKMDSTEPPFS+ RFEEIKKEV +Y+KK Sbjct: 121 GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPFSEARFEEIKKEVSAYIKK 180 Query: 887 VGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAK 1012 +GY P AVAFVPISGW+GDNM+E S +PWYKGW I RK K Sbjct: 181 IGYNPAAVAFVPISGWHGDNMLEASDRLPWYKGWNIERKEGK 222
>sp|P08736|EF11_DROME Elongation factor 1-alpha (EF-1-alpha) (50 kDa female-specific protein) Length = 463 Score = 406 bits (1043), Expect = e-113 Identities = 191/219 (87%), Positives = 209/219 (95%) Frame = +2 Query: 347 MPSDKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 526 M +K HINIVVIGHVDSGKST+TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 527 DKLKAERERGITIDIALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGT 706 DKLKAERERGITIDIALWKFET K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAGT Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120 Query: 707 GEFEAGISKNGQTREHALLAYTLGVKQMIVGVNKMDSTEPPFSDKRFEEIKKEVGSYLKK 886 GEFEAGISKNGQTREHALLA+TLGVKQ+IVGVNKMDS+EPP+S+ R+EEIKKEV SY+KK Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSSEPPYSEARYEEIKKEVSSYIKK 180 Query: 887 VGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRK 1003 +GY P AVAFVPISGW+GDNM+E STNMPW+KGW++ RK Sbjct: 181 IGYNPAAVAFVPISGWHGDNMLEPSTNMPWFKGWKVERK 219
>sp|P05303|EF12_DROME Elongation factor 1-alpha (EF-1-alpha) Length = 462 Score = 404 bits (1037), Expect = e-112 Identities = 190/222 (85%), Positives = 208/222 (93%) Frame = +2 Query: 347 MPSDKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 526 M +K HINIVVIGHVDSGKST+TGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 527 DKLKAERERGITIDIALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGT 706 DKLKAERERGITIDIALWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAGT Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120 Query: 707 GEFEAGISKNGQTREHALLAYTLGVKQMIVGVNKMDSTEPPFSDKRFEEIKKEVGSYLKK 886 GEFEAGISKNGQTREHALLA+TLGVKQ+IVGVNKMDSTEPP+S+ R+EEIKKEV SY+KK Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKK 180 Query: 887 VGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRKNAK 1012 +GY P +VAFVPISGW+GDNM+E S MPW+KGW + RK K Sbjct: 181 IGYNPASVAFVPISGWHGDNMLEPSEKMPWFKGWSVERKEGK 222
>sp|P17507|EF1A2_XENLA Elongation factor 1-alpha, oocyte form (EF-1-alpha-O) (EF-1AO) (42S p48) Length = 461 Score = 397 bits (1021), Expect = e-110 Identities = 187/219 (85%), Positives = 203/219 (92%) Frame = +2 Query: 347 MPSDKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 526 M +K HINIVVIGHVDSGKST+TGHLIYKCGGIDKRTIEKFEKEA EMGKGSFKYAWVL Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL 60 Query: 527 DKLKAERERGITIDIALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGT 706 DKLKAERERGITIDI+LWKFET KFY+T+IDAPGHRDFIKNMITGTSQADCAVL+VA G Sbjct: 61 DKLKAERERGITIDISLWKFETGKFYITIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV 120 Query: 707 GEFEAGISKNGQTREHALLAYTLGVKQMIVGVNKMDSTEPPFSDKRFEEIKKEVGSYLKK 886 GEFEAGISKNGQTREHALLA+TLGVKQ+I+GVNKMDSTEPPFS KRFEEI KEV +Y+KK Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIIGVNKMDSTEPPFSQKRFEEITKEVSAYIKK 180 Query: 887 VGYQPDAVAFVPISGWNGDNMIEESTNMPWYKGWEITRK 1003 +GY P V FVPISGW+GDNM+E STNMPW+KGW+I RK Sbjct: 181 IGYNPATVPFVPISGWHGDNMLEASTNMPWFKGWKIERK 219
Database: Non-redundant SwissProt sequences Posted date: Dec 6, 2005 7:40 AM Number of letters in database: 68,354,980 Number of sequences in database: 184,735 Database: swissprot.01 Posted date: Dec 6, 2005 8:18 AM Number of letters in database: 66,202,850 Number of sequences in database: 184,431 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 110,611,925 Number of Sequences: 369166 Number of extensions: 2122958 Number of successful extensions: 8586 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 6843 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7344 length of database: 68,354,980 effective HSP length: 111 effective length of database: 47,849,395 effective search space used: 11340306615 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)