DrC_00113
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00113 (1121 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor 293 6e-79 sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine protei... 277 5e-74 sp|P61277|CATK_MACMU Cathepsin K precursor >gi|47117667|sp|... 274 4e-73 sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (C... 273 5e-73 sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein) 273 9e-73 sp|Q9GLE3|CATK_PIG Cathepsin K precursor 272 1e-72 sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 271 2e-72 sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 270 6e-72 sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 270 7e-72 sp|Q9JIA9|CATR_MOUSE Cathepsin R precursor 269 9e-72
>sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor Length = 326 Score = 293 bits (750), Expect = 6e-79 Identities = 143/326 (43%), Positives = 202/326 (61%), Gaps = 2/326 (0%) Frame = +3 Query: 12 LFVVSHATLHQPTINAQLNNEWKAFKLLFKKEYEPIDEVVRRLIWEENLRYIQKHNLEAD 191 LF+++ T+ N L ++WK ++ KEY D+ RR IWE+N+++IQ+HNL D Sbjct: 3 LFILAVLTVGVLGSNDDLWHQWKR---MYNKEYNGADDQHRRNIWEKNVKHIQEHNLRHD 59 Query: 192 LGKHTFTLGLNQFADLTNEEFRSKYLSKNLMSRSQINSKFVMPYKT--KLNDDEVDWRKK 365 LG T+TLGLNQF D+T EEF++KYL++ MSR+ +PY+ + D++DWR+ Sbjct: 60 LGLVTYTLGLNQFTDMTFEEFKAKYLTE--MSRASDILSHGVPYEANNRAVPDKIDWRES 117 Query: 366 GVVTPVKNQYGCNAGWAFAATGSCEGRYAMQTGVLMSFSEEQLIDCSDAYGNSGCKGGSP 545 G VT VK+Q C + WAF+ TG+ EG+Y +SFSE+QL+DCS +GN+GC GG Sbjct: 118 GYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLM 177 Query: 546 DNSFNYYKPYGMNNEETYPYFGIKDRCKYNNNSVIAHVVSFIDVARNNEIQVAAAVSAEG 725 +N++ Y K +G+ E +YPY ++ +C+YN +A V + V +E+++ V A Sbjct: 178 ENAYQYLKQFGLETESSYPYTAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARR 237 Query: 726 PLTAIIDASLPSFQFYREGIYNDPTCSKTSPNHAVLIVGYGESEGEDYWIVKNSWGAMWG 905 P +D F YR GIY TCS NHAVL VGYG G DYWIVKNSWG WG Sbjct: 238 PAAVAVDVE-SDFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWG 296 Query: 906 DHGYIKMIRDGNNQCGIASSTSFPIL 983 + GYI+M R+ N CGIAS S P++ Sbjct: 297 ERGYIRMARNRGNMCGIASLASLPMV 322
>sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine proteinase 1) [Contains: Cathepsin L heavy chain; Cathepsin L light chain] Length = 341 Score = 277 bits (708), Expect = 5e-74 Identities = 142/315 (45%), Positives = 197/315 (62%), Gaps = 11/315 (3%) Frame = +3 Query: 72 EWKAFKLLFKKEYEP-IDEVVRRLIWEENLRYIQKHNLEADLGKHTFTLGLNQFADLTNE 248 EW FKL +K Y+ +E R I+ EN I KHN GK +F L +N++ADL + Sbjct: 28 EWHTFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHH 87 Query: 249 EFRSKYLSKNLMSRSQINSK--------FVMPYKTKLNDDEVDWRKKGVVTPVKNQYGCN 404 EFR N Q+ + F+ P L VDWR KG VT VK+Q C Sbjct: 88 EFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTL-PKSVDWRTKGAVTAVKDQGHCG 146 Query: 405 AGWAFAATGSCEGRYAMQTGVLMSFSEEQLIDCSDAYGNSGCKGGSPDNSFNYYKPY-GM 581 + WAF++TG+ EG++ ++GVL+S SE+ L+DCS YGN+GC GG DN+F Y K G+ Sbjct: 147 SCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGI 206 Query: 582 NNEETYPYFGIKDRCKYNNNSVIAHVVSFIDVARNNEIQVAAAVSAEGPLTAIIDASLPS 761 + E++YPY I D C +N +V A F D+ + +E ++A AV+ GP++ IDAS S Sbjct: 207 DTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHES 266 Query: 762 FQFYREGIYNDPTCSKTSPNHAVLIVGYGESE-GEDYWIVKNSWGAMWGDHGYIKMIRDG 938 FQFY EG+YN+P C + +H VL+VG+G E GEDYW+VKNSWG WGD G+IKM+R+ Sbjct: 267 FQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNK 326 Query: 939 NNQCGIASSTSFPIL 983 NQCGIAS++S+P++ Sbjct: 327 ENQCGIASASSYPLV 341
>sp|P61277|CATK_MACMU Cathepsin K precursor sp|P61276|CATK_MACFA Cathepsin K precursor Length = 329 Score = 274 bits (700), Expect = 4e-73 Identities = 138/308 (44%), Positives = 189/308 (61%), Gaps = 3/308 (0%) Frame = +3 Query: 63 LNNEWKAFKLLFKKEYEP-IDEVVRRLIWEENLRYIQKHNLEADLGKHTFTLGLNQFADL 239 L+ W+ +K +K+Y +DE+ RRLIWE+NL+YI HNLEA LG HT+ L +N D+ Sbjct: 22 LDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDM 81 Query: 240 TNEEFRSKYLSKNL-MSRSQINSKFVMPYKTKLNDDEVDWRKKGVVTPVKNQYGCNAGWA 416 TNEE K + S S+ N +P D VD+RKKG VTPVKNQ C + WA Sbjct: 82 TNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWA 141 Query: 417 FAATGSCEGRYAMQTGVLMSFSEEQLIDCSDAYGNSGCKGGSPDNSFNYY-KPYGMNNEE 593 F++ G+ EG+ +TG L++ S + L+DC N GC GG N+F Y K G+++E+ Sbjct: 142 FSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSED 199 Query: 594 TYPYFGIKDRCKYNNNSVIAHVVSFIDVARNNEIQVAAAVSAEGPLTAIIDASLPSFQFY 773 YPY G ++ C YN A + ++ NE + AV+ GP++ IDASL SFQFY Sbjct: 200 AYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 259 Query: 774 REGIYNDPTCSKTSPNHAVLIVGYGESEGEDYWIVKNSWGAMWGDHGYIKMIRDGNNQCG 953 +G+Y D +C+ + NHAVL VGYG +G +WI+KNSWG WG+ GYI M R+ NN CG Sbjct: 260 SKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACG 319 Query: 954 IASSTSFP 977 IA+ SFP Sbjct: 320 IANLASFP 327
>sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (Cathepsin X) (Cathepsin O2) Length = 329 Score = 273 bits (699), Expect = 5e-73 Identities = 137/308 (44%), Positives = 190/308 (61%), Gaps = 3/308 (0%) Frame = +3 Query: 63 LNNEWKAFKLLFKKEYE-PIDEVVRRLIWEENLRYIQKHNLEADLGKHTFTLGLNQFADL 239 L+ W+ +K +K+Y +DE+ RRLIWE+NL+YI HNLEA LG HT+ L +N D+ Sbjct: 22 LDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDM 81 Query: 240 TNEEFRSKYLSKNL-MSRSQINSKFVMPYKTKLNDDEVDWRKKGVVTPVKNQYGCNAGWA 416 T+EE K + +S S+ N +P D VD+RKKG VTPVKNQ C + WA Sbjct: 82 TSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWA 141 Query: 417 FAATGSCEGRYAMQTGVLMSFSEEQLIDCSDAYGNSGCKGGSPDNSFNYY-KPYGMNNEE 593 F++ G+ EG+ +TG L++ S + L+DC N GC GG N+F Y K G+++E+ Sbjct: 142 FSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSED 199 Query: 594 TYPYFGIKDRCKYNNNSVIAHVVSFIDVARNNEIQVAAAVSAEGPLTAIIDASLPSFQFY 773 YPY G ++ C YN A + ++ NE + AV+ GP++ IDASL SFQFY Sbjct: 200 AYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 259 Query: 774 REGIYNDPTCSKTSPNHAVLIVGYGESEGEDYWIVKNSWGAMWGDHGYIKMIRDGNNQCG 953 +G+Y D +C+ + NHAVL VGYG +G +WI+KNSWG WG+ GYI M R+ NN CG Sbjct: 260 SKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACG 319 Query: 954 IASSTSFP 977 IA+ SFP Sbjct: 320 IANLASFP 327
>sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein) Length = 329 Score = 273 bits (697), Expect = 9e-73 Identities = 143/323 (44%), Positives = 195/323 (60%), Gaps = 3/323 (0%) Frame = +3 Query: 18 VVSHATLHQPTINAQLNNEWKAFKLLFKKEYEP-IDEVVRRLIWEENLRYIQKHNLEADL 194 VVS A LH I L+ +W+ +K + K+Y +DE+ RRLIWE+NL++I HNLEA L Sbjct: 11 VVSFA-LHPEEI---LDTQWELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASL 66 Query: 195 GKHTFTLGLNQFADLTNEEFRSKYLSKNLM-SRSQINSKFVMPYKTKLNDDEVDWRKKGV 371 G HT+ L +N D+T+EE K + SRS N +P D +D+RKKG Sbjct: 67 GVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGY 126 Query: 372 VTPVKNQYGCNAGWAFAATGSCEGRYAMQTGVLMSFSEEQLIDCSDAYGNSGCKGGSPDN 551 VTPVKNQ C + WAF++ G+ EG+ +TG L++ S + L+DC N GC GG N Sbjct: 127 VTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NYGCGGGYMTN 184 Query: 552 SFNYY-KPYGMNNEETYPYFGIKDRCKYNNNSVIAHVVSFIDVARNNEIQVAAAVSAEGP 728 +F Y + G+++E+ YPY G + C YN A + ++ NE + AV+ GP Sbjct: 185 AFQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGP 244 Query: 729 LTAIIDASLPSFQFYREGIYNDPTCSKTSPNHAVLIVGYGESEGEDYWIVKNSWGAMWGD 908 ++ IDASL SFQFY +G+Y D CS + NHAVL VGYG +G +WI+KNSWG WG+ Sbjct: 245 VSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWIIKNSWGESWGN 304 Query: 909 HGYIKMIRDGNNQCGIASSTSFP 977 GYI M R+ NN CGIA+ SFP Sbjct: 305 KGYILMARNKNNACGIANLASFP 327
>sp|Q9GLE3|CATK_PIG Cathepsin K precursor Length = 330 Score = 272 bits (695), Expect = 1e-72 Identities = 135/308 (43%), Positives = 190/308 (61%), Gaps = 3/308 (0%) Frame = +3 Query: 63 LNNEWKAFKLLFKKEYEP-IDEVVRRLIWEENLRYIQKHNLEADLGKHTFTLGLNQFADL 239 L+ +W+ +K ++K+Y +DE+ RRLIWE+NL++I HNLEA LG HT+ L +N D+ Sbjct: 23 LDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDM 82 Query: 240 TNEEFRSKYLSKNLM-SRSQINSKFVMPYKTKLNDDEVDWRKKGVVTPVKNQYGCNAGWA 416 T+EE K + S S+ N +P D +D+RKKG VTPVKNQ C + WA Sbjct: 83 TSEEVVQKMTGLKVPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWA 142 Query: 417 FAATGSCEGRYAMQTGVLMSFSEEQLIDCSDAYGNSGCKGGSPDNSFNYY-KPYGMNNEE 593 F++ G+ EG+ +TG L++ S + L+DC N GC GG N+F Y K G+++E+ Sbjct: 143 FSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSED 200 Query: 594 TYPYFGIKDRCKYNNNSVIAHVVSFIDVARNNEIQVAAAVSAEGPLTAIIDASLPSFQFY 773 YPY G + C YN A + ++ NE + AV+ GP++ IDASL SFQFY Sbjct: 201 AYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 260 Query: 774 REGIYNDPTCSKTSPNHAVLIVGYGESEGEDYWIVKNSWGAMWGDHGYIKMIRDGNNQCG 953 +G+Y D C+ + NHAVL VGYG +G+ +WI+KNSWG WG+ GYI M R+ NN CG Sbjct: 261 SKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKGYILMARNKNNACG 320 Query: 954 IASSTSFP 977 IA+ SFP Sbjct: 321 IANLASFP 328
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin L light chain] Length = 339 Score = 271 bits (693), Expect = 2e-72 Identities = 135/314 (42%), Positives = 194/314 (61%), Gaps = 9/314 (2%) Frame = +3 Query: 63 LNNEWKAFKLLFKKEY-EPIDEVVRRLIWEENLRYIQKHNLEADLGKHTFTLGLNQFADL 239 + EW +KL +K Y ++E R I+ EN I KHN GK ++ LGLN++AD+ Sbjct: 24 IKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADM 83 Query: 240 TNEEFRSKYLSKN------LMSRSQINSKFVMPYKTKLNDDEVDWRKKGVVTPVKNQYGC 401 + EF+ N + R+ + +P VDWR+ G VT VK+Q C Sbjct: 84 LHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHC 143 Query: 402 NAGWAFAATGSCEGRYAMQTGVLMSFSEEQLIDCSDAYGNSGCKGGSPDNSFNYYKPY-G 578 + WAF++TG+ EG++ + GVL+S SE+ L+DCS YGN+GC GG DN+F Y K G Sbjct: 144 GSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGG 203 Query: 579 MNNEETYPYFGIKDRCKYNNNSVIAHVVSFIDVARNNEIQVAAAVSAEGPLTAIIDASLP 758 ++ E++YPY GI D C +N ++ A F+D+ +E ++ AV+ GP++ IDAS Sbjct: 204 IDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHE 263 Query: 759 SFQFYREGIYNDPTCSKTSPNHAVLIVGYGESE-GEDYWIVKNSWGAMWGDHGYIKMIRD 935 SFQ Y EG+YN+P C + + +H VL+VGYG E G DYW+VKNSWG WG+ GYIKM R+ Sbjct: 264 SFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARN 323 Query: 936 GNNQCGIASSTSFP 977 NNQCGIA+++S+P Sbjct: 324 QNNQCGIATASSYP 337
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin L light chain] Length = 333 Score = 270 bits (690), Expect = 6e-72 Identities = 141/317 (44%), Positives = 195/317 (61%), Gaps = 6/317 (1%) Frame = +3 Query: 45 PTINAQLNNEWKAFKLLFKKEYEPIDEVVRRLIWEENLRYIQKHNLEADLGKHTFTLGLN 224 P + LN +W +K ++ Y +E RR +WE+N++ I+ HN E GKH FT+ +N Sbjct: 19 PKFDQSLNAQWYQWKATHRRLYGMNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMN 78 Query: 225 QFADLTNEEFRSKYLSKNLMSRSQINSKFVMPYKTKLNDDEVDWRKKGVVTPVKNQYGCN 404 F D+TNEEFR + ++ + + F P ++ VDWR+KG VTPVKNQ C Sbjct: 79 AFGDMTNEEFR-QVMNGFQNQKHKKGKMFQEPLFAEI-PKSVDWREKGYVTPVKNQGQCG 136 Query: 405 AGWAFAATGSCEGRYAMQTGVLMSFSEEQLIDCSDAYGNSGCKGGSPDNSFNYYKPY-GM 581 + WAF+ATG+ EG+ +TG L+S SE+ L+DCS A GN GC GG DN+F Y K G+ Sbjct: 137 SCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGL 196 Query: 582 NNEETYPYFG-IKDRCKYNNNSVIAHVVSFIDVARNNEIQVAAAVSAEGPLTAIIDASLP 758 ++EE+YPY G + C Y A+ F+D+ + E + AV+ GP++ IDA Sbjct: 197 DSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQ-REKALMKAVATLGPISVAIDAGHQ 255 Query: 759 SFQFYREGIYNDPTCSKTSPNHAVLIVGYGESEGED----YWIVKNSWGAMWGDHGYIKM 926 SFQFY+ GIY DP CS +H VL+VGYG EG D +WIVKNSWG WG +GY+KM Sbjct: 256 SFQFYKSGIYFDPDCSSKDLDHGVLVVGYG-FEGTDSNNKFWIVKNSWGPEWGWNGYVKM 314 Query: 927 IRDGNNQCGIASSTSFP 977 +D NN CGIA++ S+P Sbjct: 315 AKDQNNHCGIATAASYP 331
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains: Cathepsin L heavy chain; Cathepsin L light chain] Length = 333 Score = 270 bits (689), Expect = 7e-72 Identities = 138/324 (42%), Positives = 194/324 (59%), Gaps = 5/324 (1%) Frame = +3 Query: 21 VSHATLHQPTINAQLNNEWKAFKLLFKKEYEPIDEVVRRLIWEENLRYIQKHNLEADLGK 200 ++ ATL T + L +W +K + + Y +E RR +WE+N++ I+ HN E GK Sbjct: 14 IASATL---TFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGK 70 Query: 201 HTFTLGLNQFADLTNEEFRSKYLSKNLMSRSQINSKFVMPYKTKLNDDEVDWRKKGVVTP 380 H+FT+ +N F D+T+EEFR + +R K VDWR+KG VTP Sbjct: 71 HSFTMAMNAFGDMTSEEFRQ--VMNGFQNRKPRKGKVFQEPLFYEAPRSVDWREKGYVTP 128 Query: 381 VKNQYGCNAGWAFAATGSCEGRYAMQTGVLMSFSEEQLIDCSDAYGNSGCKGGSPDNSFN 560 VKNQ C + WAF+ATG+ EG+ +TG L+S SE+ L+DCS GN GC GG D +F Sbjct: 129 VKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQ 188 Query: 561 YYKPY-GMNNEETYPYFGIKDRCKYNNNSVIAHVVSFIDVARNNEIQVAAAVSAEGPLTA 737 Y + G+++EE+YPY ++ CKYN +A+ F+D+ + E + AV+ GP++ Sbjct: 189 YVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISV 247 Query: 738 IIDASLPSFQFYREGIYNDPTCSKTSPNHAVLIVGYG----ESEGEDYWIVKNSWGAMWG 905 IDA SF FY+EGIY +P CS +H VL+VGYG ES+ YW+VKNSWG WG Sbjct: 248 AIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWG 307 Query: 906 DHGYIKMIRDGNNQCGIASSTSFP 977 GY+KM +D N CGIAS+ S+P Sbjct: 308 MGGYVKMAKDRRNHCGIASAASYP 331
>sp|Q9JIA9|CATR_MOUSE Cathepsin R precursor Length = 334 Score = 269 bits (688), Expect = 9e-72 Identities = 134/319 (42%), Positives = 198/319 (62%), Gaps = 6/319 (1%) Frame = +3 Query: 45 PTINAQLNNEWKAFKLLFKKEYEPIDEVVRRLIWEENLRYIQKHNLEADLGKHTFTLGLN 224 P +++ L+ EW+ +K+ + K Y +E ++R++WEE L+ I+ HN E LGK+ FT+ +N Sbjct: 19 PVLDSSLDAEWQDWKIKYNKSYSLKEEKLKRVVWEEKLKMIKLHNRENSLGKNGFTMKMN 78 Query: 225 QFADLTNEEFRSKYLSKNLMSRSQINSKFVMPYKT-KLNDDEVDWRKKGVVTPVKNQYGC 401 +F D T+EEFR + ++ + + K +M + + VDWRKKG VTPV+ Q C Sbjct: 79 EFGDQTDEEFRKMMIEISVWTHRE--GKSIMKREAGSILPKFVDWRKKGYVTPVRRQGDC 136 Query: 402 NAGWAFAATGSCEGRYAMQTGVLMSFSEEQLIDCSDAYGNSGCKGGSPDNSFNY-YKPYG 578 +A WAFA TG+ E + QTG L S + L+DCS GN+GC GG N+F Y G Sbjct: 137 DACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGG 196 Query: 579 MNNEETYPYFGIKDRCKYNNNSVIAHVVSFIDVARNNEIQVAAAVSAEGPLTAIIDASLP 758 + +E TYPY G C+YN + A + F+ + ++ +I + AAV+ GP+TA IDAS Sbjct: 197 LESEATYPYEGKDGPCRYNPKNSKAEITGFVSLPQSEDI-LMAAVATIGPITAGIDASHE 255 Query: 759 SFQFYREGIYNDPTCSKTSPNHAVLIVGYG----ESEGEDYWIVKNSWGAMWGDHGYIKM 926 SF+ Y+ GIY++P CS + H VL+VGYG E++G YW++KNSWG WG GY+K+ Sbjct: 256 SFKNYKGGIYHEPNCSSDTVTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKL 315 Query: 927 IRDGNNQCGIASSTSFPIL 983 +D NN CGIAS +P + Sbjct: 316 AKDKNNHCGIASYAHYPTI 334
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,961,473
Number of Sequences: 369166
Number of extensions: 2286276
Number of successful extensions: 6816
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6267
length of database: 68,354,980
effective HSP length: 112
effective length of database: 47,664,660
effective search space used: 12440476260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
