Planarian EST Database

DrC_00677

Cluster detail
GO Category :
Consensus Sequence :
>DrC_00677 GAATTCGGCACGAGGATTTTATCAAATAAATCTTGGTAATATTTTCCATCAATTTATGCG CTGGAAAAATCTTTTACCACGTATACAACCATTTTATGCTGTTAAGTGCCAACCAGACCC AAAAGTCATATCGTTTTTAGGAAAACTGGGTGCTGGTTTTGATTGTGCTAGCAAACAAGA AATTAAAACTGTTATTGATAGTATGTCGTATAATACTACTCAAGCTGCTACAAACATTAT TTTTGCTAACCCATTTAAGTTCAAAAAGGATATTTTGTATGCGAGTCGTACCGGTGTCAA CACAGTAACATTTGACACCGAGAGCGAGCTTATTAAACTATCCCAGGAATGGCCAGCGGT TCAGCTGGTATTGAGACTGTCTCCTCAACGAGTTTATGATGCTACTTGTATTCTCGGCAA TAAATTCGGTGCTGATGCCGATGAAGTGCCATTTCTATTGCAACGTGCAAAGGAATTATC AATGAATGTCGTTGGTGTGAGTTTTCATGTTGGTAGTGGTTGCAATGAAATGGATGCATT TCCAGAAACGGTTATTTATTGTTCTCAAGTAATGGAACTTGCCCGTAAAATTGGATTTAA ACCAACAATTCTTGATATCGGTGGAGGATTTCCAGGTTTAAGCAGTGTTAACGGAGATCT CTCTAAGCAACTTAAATTTGAAGAAATGTGCGTCAAATTGAATCATGTTCTTGATACGTA TTTCCCCGAGGAAAATGGCTATAAAATCATTGCTGAGCCTGGTCGTTATTTTGTTCATGG CGCATATACTCTTGTAACACAGGTTATCGGTGTGCATAGCCTTGATTTGAGCAATCCTAT CGCTAATATCAATAATATTGCTTGTCACAAAAGCAATTATGAGACCTATGACAGTATTGA AACGTCTAGCCAAGGTTCTATTGCGGAATATTTGATGGATAGCATGAGCGACATATCGGA GTTTTCTAATGCTGAATTGCGAAAACCTGACAAACATCAATTAAAATATAATCATTTGAT CGAAAAAGGCTACCGATATGTCATCAATGATGGGGTCTATAATTCATTTAATTGTATTGT TTTTGATCATGCCAAACCTGCCCCGTTTGGCATTTTCGACAATGAAGGTTATTTCAAAGA AGTAGCCTGTGAAACTGAGACATTTGTGTCAACTATTTATGGACCGACTTGCGATGGATT TGACTGTTTAATACAACAAGAACCCTTGCCGAAAATGGATGTTGGAAATTGGATCGTATG GCCTAATATGGGTGCTTACACAATTGCCGCGAGCAGTTGTTTTAATGGCATTCCTATGGC TGATGTTCATTACTTCATGTATCAAGATGACGCTTTAGAACTGGACAAAGTTTTATCCTG TACATTGGGGGGTGGAAAGGATCAGTTCAATAATGATATTGATTCCCACCAAATAATTGT GGAGGCCGTTTGAATATTTTTTAACTGCTTTTTGTAGTGTTAATAGAAAATTTAGCTTCC GTATGTTTGTCTAGAATTCTCCGTATTAATTAATAATTGTGCTATATGATTATTCACAGA CTATCGATCAATGCAATTTGTCTTTAACATTATTGATGTTATTGTTATCGTTTTAATGTT GTAGACAATAAATGATTTAATTG

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00677
         (1643 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P00860|DCOR_MOUSE  Ornithine decarboxylase (ODC)               292   2e-78
sp|Q9I8S4|DCOR2_XENLA  Ornithine decarboxylase 2 (ODC 2) (xO...   289   1e-77
sp|P27119|DCOR_MUSPA  Ornithine decarboxylase (ODC)               286   9e-77
sp|P09057|DCOR_RAT  Ornithine decarboxylase (ODC)                 285   3e-76
sp|P27120|DCOR1_XENLA  Ornithine decarboxylase 1 (ODC 1) (xO...   281   3e-75
sp|P27118|DCOR_CHICK  Ornithine decarboxylase (ODC)               281   5e-75
sp|P27117|DCOR_BOVIN  Ornithine decarboxylase (ODC)               279   2e-74
sp|P11926|DCOR_HUMAN  Ornithine decarboxylase (ODC)               278   3e-74
sp|P41931|DCOR_CAEEL  Ornithine decarboxylase (ODC)               263   1e-69
sp|P14019|DCOR_CRIGR  Ornithine decarboxylase (ODC)               261   3e-69

>sp|P00860|DCOR_MOUSE Ornithine decarboxylase (ODC)
          Length = 461

 Score =  292 bits (747), Expect = 2e-78
 Identities = 169/441 (38%), Positives = 238/441 (53%)
 Frame = +2

Query: 17   FYQINLGNIFHQFMRWKNLLPRIQPFYAVKCQPDPKVISFLGKLGAGFDCASKQEIKTVI 196
            FY  +LG+I  + +RW   LPR+ PFYAVKC     ++S L  +G GFDCASK EI+ V 
Sbjct: 40   FYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQLV- 98

Query: 197  DSMSYNTTQAATNIIFANPFKFKKDILYASRTGVNTVTFDTESELIKLSQEWPAVQLVLR 376
                      A  +I+ANP K    I YA+  GV  +TFD+E EL+K+++  P  +LVLR
Sbjct: 99   ----QGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLR 154

Query: 377  LSPQRVYDATCILGNKFGADADEVPFLLQRAKELSMNVVGVSFHVGSGCNEMDAFPETVI 556
            ++      A C L  KFGA       LL+RAKEL+++V+GVSFHVGSGC + D F + V 
Sbjct: 155  IATDDS-KAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPDTFVQAVS 213

Query: 557  YCSQVMELARKIGFKPTILDIGGGFPGLSSVNGDLSKQLKFEEMCVKLNHVLDTYFPEEN 736
                V ++A ++GF   +LDIGGGFPG          +LKFEE+   +N  LD YFP ++
Sbjct: 214  DARCVFDMATEVGFSMHLLDIGGGFPGSEDT------KLKFEEITSVINPALDKYFPSDS 267

Query: 737  GYKIIAEPGRYFVHGAYTLVTQVIGVHSLDLSNPIANINNIACHKSNYETYDSIETSSQG 916
            G +IIAEPGRY+V  A+TL   +I   ++    P                          
Sbjct: 268  GVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQP-------------------------- 301

Query: 917  SIAEYLMDSMSDISEFSNAELRKPDKHQLKYNHLIEKGYRYVINDGVYNSFNCIVFDHAK 1096
                      SD  + SN                 E+ + Y +NDGVY SFNCI++DHA 
Sbjct: 302  ---------GSDDEDESN-----------------EQTFMYYVNDGVYGSFNCILYDHAH 335

Query: 1097 PAPFGIFDNEGYFKEVACETETFVSTIYGPTCDGFDCLIQQEPLPKMDVGNWIVWPNMGA 1276
                         K    + + + S+I+GPTCDG D ++++  LP+M VG+W+++ NMGA
Sbjct: 336  VKAL-------LQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGA 388

Query: 1277 YTIAASSCFNGIPMADVHYFM 1339
            YT+AA+S FNG    +++Y M
Sbjct: 389  YTVAAASTFNGFQRPNIYYVM 409

>sp|Q9I8S4|DCOR2_XENLA Ornithine decarboxylase 2 (ODC 2) (xODC2)
          Length = 456

 Score =  289 bits (740), Expect = 1e-77
 Identities = 168/441 (38%), Positives = 238/441 (53%)
 Frame = +2

Query: 17   FYQINLGNIFHQFMRWKNLLPRIQPFYAVKCQPDPKVISFLGKLGAGFDCASKQEIKTVI 196
            F+  +LG++  + +R+   LPR++PFYAVKC     V+  L +LGAGFDCASK EI+ V 
Sbjct: 39   FFVADLGDVVRKHLRFLKALPRVKPFYAVKCNSSKGVVKILAELGAGFDCASKTEIELVQ 98

Query: 197  DSMSYNTTQAATNIIFANPFKFKKDILYASRTGVNTVTFDTESELIKLSQEWPAVQLVLR 376
            D        A   II+ANP K    I YA++ GV  +TFD E EL K+S+  P  ++VLR
Sbjct: 99   D-----VGVAPERIIYANPCKQISQIKYAAKNGVQMMTFDNEVELSKVSRSHPNARMVLR 153

Query: 377  LSPQRVYDATCILGNKFGADADEVPFLLQRAKELSMNVVGVSFHVGSGCNEMDAFPETVI 556
            ++      ++  L  KFGA       LL+ AK LS++V+GVSFHVGSGC +  A+ + + 
Sbjct: 154  IATDDS-KSSARLSVKFGAPLKSCRRLLEMAKNLSVDVIGVSFHVGSGCTDSKAYTQAIS 212

Query: 557  YCSQVMELARKIGFKPTILDIGGGFPGLSSVNGDLSKQLKFEEMCVKLNHVLDTYFPEEN 736
                V E+A + G+K  +LDIGGGFPG          +++FEE+   +N  LD YFPE +
Sbjct: 213  DARLVFEMASEFGYKMWLLDIGGGFPGTE------DSKIRFEEIAGVINPALDMYFPESS 266

Query: 737  GYKIIAEPGRYFVHGAYTLVTQVIGVHSLDLSNPIANINNIACHKSNYETYDSIETSSQG 916
              +IIAEPGRY+V  A++L   VI    ++                              
Sbjct: 267  DVQIIAEPGRYYVASAFSLAVNVIAKKEVE------------------------------ 296

Query: 917  SIAEYLMDSMSDISEFSNAELRKPDKHQLKYNHLIEKGYRYVINDGVYNSFNCIVFDHAK 1096
                    S+SD  E  ++                 K   Y +NDGVY SFNC+VFDHA 
Sbjct: 297  -------HSVSDDEENESS-----------------KSIMYYVNDGVYGSFNCLVFDHAH 332

Query: 1097 PAPFGIFDNEGYFKEVACETETFVSTIYGPTCDGFDCLIQQEPLPKMDVGNWIVWPNMGA 1276
            P P          K+ + +   + S+++GPTCDG D + ++  LP++ VG+W+++ NMGA
Sbjct: 333  PKPI-------LHKKPSPDQPLYTSSLWGPTCDGLDQIAERVQLPELHVGDWLLFENMGA 385

Query: 1277 YTIAASSCFNGIPMADVHYFM 1339
            YTIAASS FNG   + VHY M
Sbjct: 386  YTIAASSNFNGFQQSPVHYAM 406

>sp|P27119|DCOR_MUSPA Ornithine decarboxylase (ODC)
          Length = 461

 Score =  286 bits (733), Expect = 9e-77
 Identities = 167/441 (37%), Positives = 236/441 (53%)
 Frame = +2

Query: 17   FYQINLGNIFHQFMRWKNLLPRIQPFYAVKCQPDPKVISFLGKLGAGFDCASKQEIKTVI 196
            FY  +LG+I  + +RW   LPR+ PFYAVKC     ++S L   G GFDCASK EI+ V 
Sbjct: 40   FYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAATGTGFDCASKTEIQLV- 98

Query: 197  DSMSYNTTQAATNIIFANPFKFKKDILYASRTGVNTVTFDTESELIKLSQEWPAVQLVLR 376
                         II+ANP K    I YA+ +GV  +TFD+E EL+K+++  P  +LVLR
Sbjct: 99   ----QGLGVPPERIIYANPCKQVSQIKYAASSGVQMMTFDSEIELMKVARAHPKAKLVLR 154

Query: 377  LSPQRVYDATCILGNKFGADADEVPFLLQRAKELSMNVVGVSFHVGSGCNEMDAFPETVI 556
            ++      A C L  KFGA       LL+RAKEL+++V+GVSFHVGSGC + + F + V 
Sbjct: 155  IATDDS-KAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVS 213

Query: 557  YCSQVMELARKIGFKPTILDIGGGFPGLSSVNGDLSKQLKFEEMCVKLNHVLDTYFPEEN 736
                V ++  ++GF   +LDIGGGFPG          +LKFEE+   +N  LD YFP ++
Sbjct: 214  DARCVFDMGTEVGFSMYLLDIGGGFPGSEDT------KLKFEEITSVINPALDKYFPSDS 267

Query: 737  GYKIIAEPGRYFVHGAYTLVTQVIGVHSLDLSNPIANINNIACHKSNYETYDSIETSSQG 916
            G +IIAEPGRY+V  A+TL   +I   ++    P                          
Sbjct: 268  GVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQP-------------------------- 301

Query: 917  SIAEYLMDSMSDISEFSNAELRKPDKHQLKYNHLIEKGYRYVINDGVYNSFNCIVFDHAK 1096
                      SD  + SN                 E+ + Y +NDGVY SFNCI++DHA 
Sbjct: 302  ---------GSDDEDESN-----------------EQTFMYYVNDGVYGSFNCILYDHAH 335

Query: 1097 PAPFGIFDNEGYFKEVACETETFVSTIYGPTCDGFDCLIQQEPLPKMDVGNWIVWPNMGA 1276
                         K    + + + S+I+GPTCDG D ++++  LP+M VG+W+++ NMGA
Sbjct: 336  VKAL-------LQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGA 388

Query: 1277 YTIAASSCFNGIPMADVHYFM 1339
            YT+AA+S FNG    +++Y M
Sbjct: 389  YTVAAASTFNGFQRPNIYYVM 409

>sp|P09057|DCOR_RAT Ornithine decarboxylase (ODC)
          Length = 461

 Score =  285 bits (729), Expect = 3e-76
 Identities = 165/441 (37%), Positives = 236/441 (53%)
 Frame = +2

Query: 17   FYQINLGNIFHQFMRWKNLLPRIQPFYAVKCQPDPKVISFLGKLGAGFDCASKQEIKTVI 196
            FY  +LG++  + +RW   LPR+ PFYAVKC     ++S L  +G GFDCASK EI+ V 
Sbjct: 40   FYVADLGDVLKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQLV- 98

Query: 197  DSMSYNTTQAATNIIFANPFKFKKDILYASRTGVNTVTFDTESELIKLSQEWPAVQLVLR 376
                         II+ANP K    I YA+  GV  +TFD+E EL+K+++  P  +LVLR
Sbjct: 99   ----QGLGVPPERIIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLR 154

Query: 377  LSPQRVYDATCILGNKFGADADEVPFLLQRAKELSMNVVGVSFHVGSGCNEMDAFPETVI 556
            ++      A C L  KFGA       LL+RAKEL+++V+GVSFHVGSGC + + F + V 
Sbjct: 155  IATDDS-KAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVS 213

Query: 557  YCSQVMELARKIGFKPTILDIGGGFPGLSSVNGDLSKQLKFEEMCVKLNHVLDTYFPEEN 736
                V ++  ++GF   +LDIGGGFPG          +LKFEE+   +N  LD YFP ++
Sbjct: 214  DARCVFDMGTEVGFSMYLLDIGGGFPGSEDT------KLKFEEITSVINPALDKYFPSDS 267

Query: 737  GYKIIAEPGRYFVHGAYTLVTQVIGVHSLDLSNPIANINNIACHKSNYETYDSIETSSQG 916
            G +IIAEPGRY+V  A+TL   +I   ++                               
Sbjct: 268  GVRIIAEPGRYYVASAFTLAVNIIAKKTV------------------------------- 296

Query: 917  SIAEYLMDSMSDISEFSNAELRKPDKHQLKYNHLIEKGYRYVINDGVYNSFNCIVFDHAK 1096
                +   + SD  + SN                 E+   Y +NDGVY SFNCI++DHA 
Sbjct: 297  ----WKEQTGSDDEDESN-----------------EQTLMYYVNDGVYGSFNCILYDHAH 335

Query: 1097 PAPFGIFDNEGYFKEVACETETFVSTIYGPTCDGFDCLIQQEPLPKMDVGNWIVWPNMGA 1276
                         K    + + + S+I+GPTCDG D ++++  LP+M VG+W+++ NMGA
Sbjct: 336  VKAL-------LQKRPKPDEKYYSSSIWGPTCDGLDRIVERCSLPEMHVGDWMLFENMGA 388

Query: 1277 YTIAASSCFNGIPMADVHYFM 1339
            YT+AA+S FNG    +++Y M
Sbjct: 389  YTVAAASTFNGFQRPNIYYVM 409

>sp|P27120|DCOR1_XENLA Ornithine decarboxylase 1 (ODC 1) (xODC1)
          Length = 460

 Score =  281 bits (720), Expect = 3e-75
 Identities = 167/441 (37%), Positives = 240/441 (54%)
 Frame = +2

Query: 17   FYQINLGNIFHQFMRWKNLLPRIQPFYAVKCQPDPKVISFLGKLGAGFDCASKQEIKTVI 196
            FY  + G+I  + +RW   LPR+ PFYAVKC     ++  L  LGAGFDCASK EI+ V 
Sbjct: 40   FYVADFGDIVKKHVRWFKALPRVTPFYAVKCNDGKAIVKTLSILGAGFDCASKTEIQLV- 98

Query: 197  DSMSYNTTQAATNIIFANPFKFKKDILYASRTGVNTVTFDTESELIKLSQEWPAVQLVLR 376
                 +   +   II+ANP K    I YA+  GV  +TFD+E EL+K+++  P  +LVLR
Sbjct: 99   ----QSIGVSPERIIYANPCKQVSQIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLR 154

Query: 377  LSPQRVYDATCILGNKFGADADEVPFLLQRAKELSMNVVGVSFHVGSGCNEMDAFPETVI 556
            ++      A C L  KFGA       LL+RAKEL+++++GVSFHVGSGC +   + + V 
Sbjct: 155  IATDDS-KAVCRLSVKFGATLKTSRLLLERAKELNVDIIGVSFHVGSGCTDPQTYVQAVS 213

Query: 557  YCSQVMELARKIGFKPTILDIGGGFPGLSSVNGDLSKQLKFEEMCVKLNHVLDTYFPEEN 736
                V ++  ++GF   +LDIGGGFPG   V      +LKFEE+   +N  LD YFP ++
Sbjct: 214  DARCVFDMGAELGFNMHLLDIGGGFPGSEDV------KLKFEEITSVINPALDKYFPADS 267

Query: 737  GYKIIAEPGRYFVHGAYTLVTQVIGVHSLDLSNPIANINNIACHKSNYETYDSIETSSQG 916
            G KIIAEPGRY+V  ++TL   +                                     
Sbjct: 268  GVKIIAEPGRYYVASSFTLAVNI------------------------------------- 290

Query: 917  SIAEYLMDSMSDISEFSNAELRKPDKHQLKYNHLIEKGYRYVINDGVYNSFNCIVFDHAK 1096
             IA+ +M  +++ S   + E    DK  + Y           +NDGVY SFNCI+FDHA 
Sbjct: 291  -IAKKVM--VNEQSGSDDEEDAANDKTLMYY-----------VNDGVYGSFNCILFDHAH 336

Query: 1097 PAPFGIFDNEGYFKEVACETETFVSTIYGPTCDGFDCLIQQEPLPKMDVGNWIVWPNMGA 1276
              P          K+   + + + S+I+GPTCDG D ++++  LP++ VG+W+++ NMGA
Sbjct: 337  VKPV-------LTKKPKPDEKFYSSSIWGPTCDGLDRIVERFELPELQVGDWMLFENMGA 389

Query: 1277 YTIAASSCFNGIPMADVHYFM 1339
            YT+AA+S FNG     ++Y M
Sbjct: 390  YTVAAASTFNGFQRPTLYYVM 410

>sp|P27118|DCOR_CHICK Ornithine decarboxylase (ODC)
          Length = 450

 Score =  281 bits (718), Expect = 5e-75
 Identities = 166/441 (37%), Positives = 231/441 (52%)
 Frame = +2

Query: 17   FYQINLGNIFHQFMRWKNLLPRIQPFYAVKCQPDPKVISFLGKLGAGFDCASKQEIKTVI 196
            FY  +LG+I  + MRW   LPR+ PFYAVKC     V+  L  LGAGFDCASK EI+ V 
Sbjct: 30   FYVADLGDIVKKHMRWHKALPRVTPFYAVKCNDSEAVVKTLAVLGAGFDCASKTEIQLV- 88

Query: 197  DSMSYNTTQAATNIIFANPFKFKKDILYASRTGVNTVTFDTESELIKLSQEWPAVQLVLR 376
                 +       II+ANP K    I +A+ +GV  +TFD+E EL+K+++  P  +L+LR
Sbjct: 89   ----QSIGVPPERIIYANPCKQLSQIKHAANSGVRMMTFDSEVELMKIARPHPKAKLLLR 144

Query: 377  LSPQRVYDATCILGNKFGADADEVPFLLQRAKELSMNVVGVSFHVGSGCNEMDAFPETVI 556
            ++      A C L  KFGA       LL+RAKEL + +VGVSFHVGSGC + + F + + 
Sbjct: 145  ITTDDS-KAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPETFVQAIS 203

Query: 557  YCSQVMELARKIGFKPTILDIGGGFPGLSSVNGDLSKQLKFEEMCVKLNHVLDTYFPEEN 736
                V ++  ++GF   +LDIGGGFPG   V      +LKFEE+   +N  LD YFP ++
Sbjct: 204  DARCVFDMGAELGFNMYLLDIGGGFPGSEDV------KLKFEEITSVINPALDKYFPLDS 257

Query: 737  GYKIIAEPGRYFVHGAYTLVTQVIGVHSLDLSNPIANINNIACHKSNYETYDSIETSSQG 916
               IIAEPGRY+V  A+TL   +I                             +     G
Sbjct: 258  EVTIIAEPGRYYVASAFTLAVNII-------------------------AKKIVSKEQTG 292

Query: 917  SIAEYLMDSMSDISEFSNAELRKPDKHQLKYNHLIEKGYRYVINDGVYNSFNCIVFDHAK 1096
            S      D   D+++                     K   Y +NDGVY SFNCI++DHA 
Sbjct: 293  S------DDEDDVND---------------------KTLMYYVNDGVYGSFNCILYDHAH 325

Query: 1097 PAPFGIFDNEGYFKEVACETETFVSTIYGPTCDGFDCLIQQEPLPKMDVGNWIVWPNMGA 1276
              P          K    +   +  +I+GPTCDG D ++++  +P++ VG+WI++ NMGA
Sbjct: 326  VKPV-------LQKRPKPDDGCYSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENMGA 378

Query: 1277 YTIAASSCFNGIPMADVHYFM 1339
            YT+AA+S FNG     +HY M
Sbjct: 379  YTVAAASTFNGFQRPTIHYVM 399

>sp|P27117|DCOR_BOVIN Ornithine decarboxylase (ODC)
          Length = 461

 Score =  279 bits (713), Expect = 2e-74
 Identities = 165/441 (37%), Positives = 232/441 (52%)
 Frame = +2

Query: 17   FYQINLGNIFHQFMRWKNLLPRIQPFYAVKCQPDPKVISFLGKLGAGFDCASKQEIKTVI 196
            FY  +LG+I  + +RW   LPR+ PFYAVKC     ++  L  +G GFDCASK EI+ V 
Sbjct: 40   FYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQLV- 98

Query: 197  DSMSYNTTQAATNIIFANPFKFKKDILYASRTGVNTVTFDTESELIKLSQEWPAVQLVLR 376
                 +       II+ANP K    I YA+  GV  +TFD+E EL+K+++  P  +LVLR
Sbjct: 99   ----QSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLR 154

Query: 377  LSPQRVYDATCILGNKFGADADEVPFLLQRAKELSMNVVGVSFHVGSGCNEMDAFPETVI 556
            ++      A C L  KFGA       LL+RAKEL ++V+GVSFHVGSGC + + F + + 
Sbjct: 155  IATDDS-KAVCRLSVKFGATLKTSRLLLERAKELDIDVIGVSFHVGSGCTDPETFVQAIS 213

Query: 557  YCSQVMELARKIGFKPTILDIGGGFPGLSSVNGDLSKQLKFEEMCVKLNHVLDTYFPEEN 736
                V ++  ++GF   +LDIGGGFPG   V      +LKFEE+   +N  LD YFP ++
Sbjct: 214  DARCVFDMGAEVGFNMYLLDIGGGFPGSEDV------KLKFEEITSVINPALDKYFPSDS 267

Query: 737  GYKIIAEPGRYFVHGAYTLVTQVIGVHSLDLSNPIANINNIACHKSNYETYDSIETSSQG 916
            G +IIAEPGRY+V  A+TL   +I    L L     +              D  E S+  
Sbjct: 268  GVRIIAEPGRYYVASAFTLAVNII-AKKLVLKEQTGS--------------DDEEESTDR 312

Query: 917  SIAEYLMDSMSDISEFSNAELRKPDKHQLKYNHLIEKGYRYVINDGVYNSFNCIVFDHAK 1096
            +   Y+ D                                     GVY SFNCI++DHA 
Sbjct: 313  TFMYYVND-------------------------------------GVYGSFNCILYDHAH 335

Query: 1097 PAPFGIFDNEGYFKEVACETETFVSTIYGPTCDGFDCLIQQEPLPKMDVGNWIVWPNMGA 1276
              P          K    + + + S+I+GPTCDG D ++++  LP+M VG+W+++ NMGA
Sbjct: 336  VKPL-------LQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGA 388

Query: 1277 YTIAASSCFNGIPMADVHYFM 1339
            YT+AA+S FNG     ++Y M
Sbjct: 389  YTVAAASTFNGFQRPTIYYVM 409

>sp|P11926|DCOR_HUMAN Ornithine decarboxylase (ODC)
          Length = 461

 Score =  278 bits (712), Expect = 3e-74
 Identities = 165/441 (37%), Positives = 233/441 (52%)
 Frame = +2

Query: 17   FYQINLGNIFHQFMRWKNLLPRIQPFYAVKCQPDPKVISFLGKLGAGFDCASKQEIKTVI 196
            FY  +LG+I  + +RW   LPR+ PFYAVKC     ++  L   G GFDCASK EI+ V 
Sbjct: 40   FYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLV- 98

Query: 197  DSMSYNTTQAATNIIFANPFKFKKDILYASRTGVNTVTFDTESELIKLSQEWPAVQLVLR 376
                 +       II+ANP K    I YA+  GV  +TFD+E EL+K+++  P  +LVLR
Sbjct: 99   ----QSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLR 154

Query: 377  LSPQRVYDATCILGNKFGADADEVPFLLQRAKELSMNVVGVSFHVGSGCNEMDAFPETVI 556
            ++      A C L  KFGA       LL+RAKEL+++VVGVSFHVGSGC + + F + + 
Sbjct: 155  IATDDS-KAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAIS 213

Query: 557  YCSQVMELARKIGFKPTILDIGGGFPGLSSVNGDLSKQLKFEEMCVKLNHVLDTYFPEEN 736
                V ++  ++GF   +LDIGGGFPG   V      +LKFEE+   +N  LD YFP ++
Sbjct: 214  DARCVFDMGAEVGFSMYLLDIGGGFPGSEDV------KLKFEEITGVINPALDKYFPSDS 267

Query: 737  GYKIIAEPGRYFVHGAYTLVTQVIGVHSLDLSNPIANINNIACHKSNYETYDSIETSSQG 916
            G +IIAEPGRY+V  A+TL   +I    + L     +              D  + SS+ 
Sbjct: 268  GVRIIAEPGRYYVASAFTLAVNII-AKKIVLKEQTGS--------------DDEDESSEQ 312

Query: 917  SIAEYLMDSMSDISEFSNAELRKPDKHQLKYNHLIEKGYRYVINDGVYNSFNCIVFDHAK 1096
            +   Y+ D                                     GVY SFNCI++DHA 
Sbjct: 313  TFMYYVND-------------------------------------GVYGSFNCILYDHAH 335

Query: 1097 PAPFGIFDNEGYFKEVACETETFVSTIYGPTCDGFDCLIQQEPLPKMDVGNWIVWPNMGA 1276
              P          K    + + + S+I+GPTCDG D ++++  LP+M VG+W+++ NMGA
Sbjct: 336  VKPL-------LQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGA 388

Query: 1277 YTIAASSCFNGIPMADVHYFM 1339
            YT+AA+S FNG     ++Y M
Sbjct: 389  YTVAAASTFNGFQRPTIYYVM 409

>sp|P41931|DCOR_CAEEL Ornithine decarboxylase (ODC)
          Length = 422

 Score =  263 bits (671), Expect = 1e-69
 Identities = 163/445 (36%), Positives = 231/445 (51%), Gaps = 1/445 (0%)
 Frame = +2

Query: 17   FYQINLGNIFHQFMRWKNLLPRIQPFYAVKCQPDPKVISFLGKLGAGFDCASKQEIKTVI 196
            F  ++L  I  +F  WK  LP I+PFYAVKC  D  +I  L  LG GFDCASK EI  V+
Sbjct: 42   FMLVDLDKIIERFQLWKRELPMIEPFYAVKCNTDLVLIRILASLGCGFDCASKDEIDIVM 101

Query: 197  DSMSYNTTQAATNIIFANPFKFKKDILYASRTGVNTVTFDTESELIKLSQEWPAVQLVLR 376
                  T  +A  II+ANP K +  I +A    V  +TFD   EL+K+++  P  +++LR
Sbjct: 102  -----GTGVSAERIIYANPCKTRSFIAHAMDRDVKMMTFDNPEELLKIAKLHPNAEMILR 156

Query: 377  LSPQRVYDATCILGNKFGADAD-EVPFLLQRAKELSMNVVGVSFHVGSGCNEMDAFPETV 553
            ++      ATC L  KFGAD     P LL+ A E  +NVVG+SFHVGSGCN+  A+   +
Sbjct: 157  IAVSDP-TATCPLNLKFGADPIIAAPQLLKTASEEGINVVGISFHVGSGCNDASAYRNAL 215

Query: 554  IYCSQVMELARKIGFKPTILDIGGGFPGLSSVNGDLSKQLKFEEMCVKLNHVLDTYFPEE 733
             +   + E+   +GFK  I+D+GGGFPG    N        FE++   +   LD +FP+ 
Sbjct: 216  QHAKNLCEIGEGLGFKMDIIDMGGGFPGAEHHN-------PFEKIAETIRDALDEFFPDT 268

Query: 734  NGYKIIAEPGRYFVHGAYTLVTQVIGVHSLDLSNPIANINNIACHKSNYETYDSIETSSQ 913
            N  ++IAEPGR+F  G ++LV  +I  H+ ++  P + I           T D  + +  
Sbjct: 269  N-KRLIAEPGRFFAAGPFSLVANII--HATEV--PASKI-----------TKDPKDCADH 312

Query: 914  GSIAEYLMDSMSDISEFSNAELRKPDKHQLKYNHLIEKGYRYVINDGVYNSFNCIVFDHA 1093
            G                              Y + I  G        VY SFNCI+FDHA
Sbjct: 313  G------------------------------YMYYINDG--------VYGSFNCILFDHA 334

Query: 1094 KPAPFGIFDNEGYFKEVACETETFVSTIYGPTCDGFDCLIQQEPLPKMDVGNWIVWPNMG 1273
             P    +FD +          E F+STI+GPTCD  D +  ++ +PKM+VG W+ +P+MG
Sbjct: 335  HPIGSPLFDTD--------RNEKFMSTIWGPTCDSLDLVEDKKLMPKMNVGEWLYYPDMG 386

Query: 1274 AYTIAASSCFNGIPMADVHYFMYQD 1348
            AYT+AA++ FNG       Y M ++
Sbjct: 387  AYTLAAATTFNGFSKPVPMYVMSEE 411

>sp|P14019|DCOR_CRIGR Ornithine decarboxylase (ODC)
          Length = 455

 Score =  261 bits (668), Expect = 3e-69
 Identities = 159/442 (35%), Positives = 234/442 (52%), Gaps = 1/442 (0%)
 Frame = +2

Query: 17   FYQINLGNIFHQFMRWKNLLPRIQPFYAVKCQPDPKVISFLGKLGAGFDCASKQEIKTVI 196
            FY  +LG++  + +RW   LP + PFYAVKC     +++ L  +    DCASK EI+ V 
Sbjct: 39   FYVADLGDVLKKHLRWLKALP-VTPFYAVKCNDSRALVNTLAAITV--DCASKTEIQLV- 94

Query: 197  DSMSYNTTQAATNIIFANPFKFKKDILYASRTGVNTVTFDTESELIKLSQEWPAV-QLVL 373
                         +I+ANP K    I YA+  GV  +TFD+E EL+K+++  P V +LVL
Sbjct: 95   ----QGLGVPPERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKVTKLVL 150

Query: 374  RLSPQRVYDATCILGNKFGADADEVPFLLQRAKELSMNVVGVSFHVGSGCNEMDAFPETV 553
            R++      A C L  KFGA       LL+RAKEL+++V+GVSFHVGSGC + + F + +
Sbjct: 151  RIATDDS-KAVCRLSVKFGATLRTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAL 209

Query: 554  IYCSQVMELARKIGFKPTILDIGGGFPGLSSVNGDLSKQLKFEEMCVKLNHVLDTYFPEE 733
                 V ++  ++GF   +LDIGGGFPG          +LKFEE+   +N  LD YFP +
Sbjct: 210  SDARCVFDMGTEVGFSMYLLDIGGGFPGSEDT------KLKFEEITSVINPALDKYFPPD 263

Query: 734  NGYKIIAEPGRYFVHGAYTLVTQVIGVHSLDLSNPIANINNIACHKSNYETYDSIETSSQ 913
            +G ++IAEPGRY+V  A+TL   +                                    
Sbjct: 264  SGVRVIAEPGRYYVASAFTLAVNI------------------------------------ 287

Query: 914  GSIAEYLMDSMSDISEFSNAELRKPDKHQLKYNHLIEKGYRYVINDGVYNSFNCIVFDHA 1093
              IA+ ++   SD  + S+                 E+ + Y +NDGVY SFNCI++DHA
Sbjct: 288  --IAKKIVSKGSDDEDESS-----------------EQTFMYYVNDGVYGSFNCILYDHA 328

Query: 1094 KPAPFGIFDNEGYFKEVACETETFVSTIYGPTCDGFDCLIQQEPLPKMDVGNWIVWPNMG 1273
               P          K    + + + S+I+GPTCDG D ++++  LP+M VG+W+++ NMG
Sbjct: 329  HVKPL-------LPKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMG 381

Query: 1274 AYTIAASSCFNGIPMADVHYFM 1339
            AYT+AA+S FNG     ++Y M
Sbjct: 382  AYTVAAASTFNGFQRPSIYYVM 403

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189,656,133
Number of Sequences: 369166
Number of extensions: 4075540
Number of successful extensions: 10050
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9892
length of database: 68,354,980
effective HSP length: 116
effective length of database: 46,925,720
effective search space used: 20224985320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00677

Planaria EST Database

DrC_00677

BLASTX 2.2.13 [Nov-27-2005]

Cluster detail