Planaria EST Database

DrC_00401

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00401
         (1402 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O54734|OST48_MOUSE  Dolichyl-diphosphooligosaccharide--pr...   496   e-140
sp|Q05052|OST48_CANFA  Dolichyl-diphosphooligosaccharide--pr...   496   e-140
sp|P39656|OST48_HUMAN  Dolichyl-diphosphooligosaccharide--pr...   496   e-140
sp|P48440|OST48_CHICK  Dolichyl-diphosphooligosaccharide--pr...   491   e-138
sp|Q24319|OST48_DROME  Dolichyl-diphosphooligosaccharide--pr...   469   e-132
sp|P45971|OST48_CAEEL  Probable dolichyl-diphosphooligosacch...   401   e-111
sp|Q29381|OST48_PIG  Dolichyl-diphosphooligosaccharide--prot...   123   1e-27
sp|P33767|OSTB_YEAST  Dolichyl-diphosphooligosaccharide--pro...   117   6e-26
sp|Q01811|VNSS_INSVN  Nonstructural protein NS-S                   35   0.40 
sp|Q6KHS4|RS7_MYCMO  30S ribosomal protein S7                      35   0.40 

>sp|O54734|OST48_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa
            subunit precursor (Oligosaccharyl transferase 48 kDa
            subunit) (DDOST 48 kDa subunit)
          Length = 441

 Score =  496 bits (1278), Expect = e-140
 Identities = 248/413 (60%), Positives = 321/413 (77%), Gaps = 2/413 (0%)
 Frame = +2

Query: 104  TLVLLETFATKETHSIFFKSLRERGHKLTYHLADDSSLILNKFGEYLYKNVIIFAPSVRE 283
            TLVLL+    ++THS+FF+SL++RG +LT+  ADD SL L K+GE+LY N+IIF+PSV +
Sbjct: 32   TLVLLDNLNVRDTHSLFFRSLKDRGFELTFKTADDPSLSLIKYGEFLYDNLIIFSPSVED 91

Query: 284  FGGKIDVPTLMNFVDEGGNILVAASSKIGEAIRELGSECGIEFDEEKTAVIDHHNFDRKD 463
            FGG I+V T+  F+D GG++LVAASS IG+ +RELGSECGIEFDEEKTAVIDHHN+D  D
Sbjct: 92   FGGNINVETISAFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEEKTAVIDHHNYDVSD 151

Query: 464  DGKHTLIIADEANVAKIPIIVGKVD-SPVLFKGVGIAADDQNPLLINLLHASSSAYSFNP 640
             G+HTLI+AD  N+ K P IVGK   +P+LF+GVG+ AD  NPL++++L  SS++YSF P
Sbjct: 152  LGQHTLIVADTENLLKAPTIVGKSSLNPILFRGVGMVADPDNPLVLDILTGSSTSYSFFP 211

Query: 641  DKPVDDYPNSVGINTQLITALQARNNARVLFVGSLDLFSDDLFTASVEHAI-SKQTHARS 817
            DKP+  YP++VG NT LI  LQARNNARV+F GSLD FSD  F ++V+ A    Q ++++
Sbjct: 212  DKPITQYPHAVGRNTLLIAGLQARNNARVIFSGSLDFFSDAFFNSAVQKATPGAQRYSQT 271

Query: 818  GNEALATAISKWVFKETGVLRVGNVSHSLADKSVENpreYTIMENVHYEIVIDELRADGT 997
            GN  LA A+S+WVFKE GVLRVG VSH    + +  P  YT+ + V Y IVI++L ++G 
Sbjct: 272  GNYELAVALSRWVFKEEGVLRVGPVSHHRVGE-MAPPNAYTVTDLVEYSIVIEQL-SNGK 329

Query: 998  WTPFIADDVQLEFYRIDPFVRQNMLRKEGKFYLDFKLPDVYGVFKFLVDYHRVGYTHVHS 1177
            W PF  DD+QLEF RIDPFVR  + RK GK+ + FKLPDVYGVF+F VDY+R+GYTH++S
Sbjct: 330  WVPFDGDDIQLEFVRIDPFVRTFLKRKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYS 389

Query: 1178 STQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFSFLFLYFKDDKEKNE 1336
            STQVSVRPL HTQYERFI +AYPYYASA SMM G+ +FS +FL+ K +KEK++
Sbjct: 390  STQVSVRPLQHTQYERFIPSAYPYYASAFSMMAGLFIFSIVFLHMK-EKEKSD 441

>sp|Q05052|OST48_CANFA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa
            subunit precursor (Oligosaccharyl transferase 48 kDa
            subunit)
          Length = 445

 Score =  496 bits (1277), Expect = e-140
 Identities = 247/413 (59%), Positives = 321/413 (77%), Gaps = 2/413 (0%)
 Frame = +2

Query: 104  TLVLLETFATKETHSIFFKSLRERGHKLTYHLADDSSLILNKFGEYLYKNVIIFAPSVRE 283
            TLVLL+    +ETHS+FF+SL++R  +LT+  ADD SL L K+GE+LY N+IIF+PSV +
Sbjct: 36   TLVLLDNLNLRETHSLFFRSLKDRAFELTFKTADDPSLSLIKYGEFLYDNLIIFSPSVED 95

Query: 284  FGGKIDVPTLMNFVDEGGNILVAASSKIGEAIRELGSECGIEFDEEKTAVIDHHNFDRKD 463
            FGG I+V T+  F+D GG++LVAASS IG+ +RELGSECGIEFDEEKTAVIDHHN+D  D
Sbjct: 96   FGGNINVETISTFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEEKTAVIDHHNYDVSD 155

Query: 464  DGKHTLIIADEANVAKIPIIVGKVD-SPVLFKGVGIAADDQNPLLINLLHASSSAYSFNP 640
             G+HTLI+AD  N+ K P IVG+   +P+LF+GVG+ AD  NPL++++L  SS++YSF P
Sbjct: 156  LGQHTLIVADPENLLKAPTIVGRSSLNPILFRGVGMVADPDNPLVLDILTGSSTSYSFFP 215

Query: 641  DKPVDDYPNSVGINTQLITALQARNNARVLFVGSLDLFSDDLFTASVEHAI-SKQTHARS 817
            DKP+  YP++VG NT LI  LQARNNARV+F GSLD FSD  F ++V+ A    Q ++++
Sbjct: 216  DKPITQYPHAVGKNTLLIAGLQARNNARVVFSGSLDFFSDAFFNSAVQKAAPGSQRYSQT 275

Query: 818  GNEALATAISKWVFKETGVLRVGNVSHSLADKSVENpreYTIMENVHYEIVIDELRADGT 997
            GN  LA A+S+WVFKE GVLRVG VSH    ++   P  YT+ + V Y IVI++L ++G 
Sbjct: 276  GNYELAVALSRWVFKEEGVLRVGPVSHHRVGETAP-PNAYTVTDLVEYSIVIEQL-SNGR 333

Query: 998  WTPFIADDVQLEFYRIDPFVRQNMLRKEGKFYLDFKLPDVYGVFKFLVDYHRVGYTHVHS 1177
            W PF  DD+QLEF RIDPFVR  + +K GK+ + FKLPDVYGVF+F VDY+R+GYTH+HS
Sbjct: 334  WVPFDGDDIQLEFVRIDPFVRTFLKKKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLHS 393

Query: 1178 STQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFSFLFLYFKDDKEKNE 1336
            STQVSVRPL HTQYERFI +AYPYYASA SMM+G+ +FS +FL+ K +KEK++
Sbjct: 394  STQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFSTVFLHMK-EKEKSD 445

>sp|P39656|OST48_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa
            subunit precursor (Oligosaccharyl transferase 48 kDa
            subunit) (DDOST 48 kDa subunit)
          Length = 439

 Score =  496 bits (1277), Expect = e-140
 Identities = 247/413 (59%), Positives = 320/413 (77%), Gaps = 2/413 (0%)
 Frame = +2

Query: 104  TLVLLETFATKETHSIFFKSLRERGHKLTYHLADDSSLILNKFGEYLYKNVIIFAPSVRE 283
            TLVLL+    +ETHS+FF+SL++RG +LT+  ADD SL L K+GE+LY N+IIF+PSV +
Sbjct: 30   TLVLLDNLNVRETHSLFFRSLKDRGFELTFKTADDPSLSLIKYGEFLYDNLIIFSPSVED 89

Query: 284  FGGKIDVPTLMNFVDEGGNILVAASSKIGEAIRELGSECGIEFDEEKTAVIDHHNFDRKD 463
            FGG I+V T+  F+D GG++LVAASS IG+ +RELGSECGIEFDEEKTAVIDHHN+D  D
Sbjct: 90   FGGNINVETISAFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEEKTAVIDHHNYDISD 149

Query: 464  DGKHTLIIADEANVAKIPIIVGKVD-SPVLFKGVGIAADDQNPLLINLLHASSSAYSFNP 640
             G+HTLI+AD  N+ K P IVGK   +P+LF+GVG+ AD  NPL++++L  SS++YSF P
Sbjct: 150  LGQHTLIVADTENLLKAPTIVGKSSLNPILFRGVGMVADPDNPLVLDILTGSSTSYSFFP 209

Query: 641  DKPVDDYPNSVGINTQLITALQARNNARVLFVGSLDLFSDDLFTASVEHAI-SKQTHARS 817
            DKP+  YP++VG NT LI  LQARNNARV+F GSLD FSD  F ++V+ A    Q ++++
Sbjct: 210  DKPITQYPHAVGKNTLLIAGLQARNNARVIFSGSLDFFSDSFFNSAVQKAAPGSQRYSQT 269

Query: 818  GNEALATAISKWVFKETGVLRVGNVSHSLADKSVENpreYTIMENVHYEIVIDELRADGT 997
            GN  LA A+S+WVFKE GVLRVG VSH    ++   P  YT+ + V Y IVI +L ++G 
Sbjct: 270  GNYELAVALSRWVFKEEGVLRVGPVSHHRVGETAP-PNAYTVTDLVEYSIVIQQL-SNGK 327

Query: 998  WTPFIADDVQLEFYRIDPFVRQNMLRKEGKFYLDFKLPDVYGVFKFLVDYHRVGYTHVHS 1177
            W PF  DD+QLEF RIDPFVR  + +K GK+ + FKLPDVYGVF+F VDY+R+GYTH++S
Sbjct: 328  WVPFDGDDIQLEFVRIDPFVRTFLKKKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYS 387

Query: 1178 STQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFSFLFLYFKDDKEKNE 1336
            STQVSVRPL HTQYERFI +AYPYYASA  MM+G+ +FS +FL+ K +KEK++
Sbjct: 388  STQVSVRPLQHTQYERFIPSAYPYYASAFPMMLGLFIFSIVFLHMK-EKEKSD 439

>sp|P48440|OST48_CHICK Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa
            subunit (Oligosaccharyl transferase 48 kDa subunit) (OST
            50 kDa subunit) (DDOST 48 kDa subunit)
          Length = 413

 Score =  491 bits (1264), Expect = e-138
 Identities = 244/413 (59%), Positives = 320/413 (77%), Gaps = 2/413 (0%)
 Frame = +2

Query: 104  TLVLLETFATKETHSIFFKSLRERGHKLTYHLADDSSLILNKFGEYLYKNVIIFAPSVRE 283
            +LVLLE    ++THS+FF+SL +RG +LT+  ADD+ L L K+GE+LY N+IIF+PS+ +
Sbjct: 4    SLVLLENLNLRDTHSLFFRSLADRGFELTFRTADDAGLSLIKYGEFLYDNLIIFSPSIED 63

Query: 284  FGGKIDVPTLMNFVDEGGNILVAASSKIGEAIRELGSECGIEFDEEKTAVIDHHNFDRKD 463
            FGG I+V T+  F+D GG++LVAASS IG+ +RELGSECGIEFDEE+TAVIDHHN+D  D
Sbjct: 64   FGGNINVETITAFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEERTAVIDHHNYDISD 123

Query: 464  DGKHTLIIADEANVAKIPIIVG-KVDSPVLFKGVGIAADDQNPLLINLLHASSSAYSFNP 640
             G+HTLI+AD  N+ K P IVG K  +P+LF+GVG+ AD  NPL++++L  SS++YSF P
Sbjct: 124  PGQHTLIVADAENLLKAPTIVGKKALNPILFRGVGMVADPDNPLVLDILTGSSTSYSFFP 183

Query: 641  DKPVDDYPNSVGINTQLITALQARNNARVLFVGSLDLFSDDLFTASVEHAI-SKQTHARS 817
            DKP+  YP++VG NT LI  LQARNNARV+F GSLD FSD  F+++V+ A    + ++++
Sbjct: 184  DKPITQYPHAVGKNTLLIAGLQARNNARVVFSGSLDFFSDAFFSSAVQKAAPGSKRYSQT 243

Query: 818  GNEALATAISKWVFKETGVLRVGNVSHSLADKSVENpreYTIMENVHYEIVIDELRADGT 997
            GN  LA A+S+WVFKE GVLRVG VSH    + +  P  YT+ + V Y IVI++L +DG 
Sbjct: 244  GNYELAVALSRWVFKEEGVLRVGAVSHHRVGE-LAPPNAYTVTDLVEYSIVIEKL-SDGK 301

Query: 998  WTPFIADDVQLEFYRIDPFVRQNMLRKEGKFYLDFKLPDVYGVFKFLVDYHRVGYTHVHS 1177
            W PF  DD+QLEF RIDPFVR  + R  GK+ + FKLPDVYGVF+F VDY+R+GYTH++S
Sbjct: 302  WIPFDGDDIQLEFVRIDPFVRTFLKRNGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYS 361

Query: 1178 STQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFSFLFLYFKDDKEKNE 1336
            STQVSVRPL HTQYERFI +AYPYYA A SMMVG+ +FS +FL+ K +KEK++
Sbjct: 362  STQVSVRPLQHTQYERFIPSAYPYYAGAFSMMVGLFMFSIVFLHMK-EKEKSD 413

>sp|Q24319|OST48_DROME Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa
            subunit precursor (Oligosaccharyl transferase 48 kDa
            subunit) (DDOST 48 kDa subunit) (OST5OP) (DrOST)
            (DmOST50)
          Length = 449

 Score =  469 bits (1208), Expect = e-132
 Identities = 242/431 (56%), Positives = 310/431 (71%), Gaps = 11/431 (2%)
 Frame = +2

Query: 62   LFVSLCVSSCFAI-----DTLVLLETFATKETHSIFFKSLRERGHKLTYHLADDSSLILN 226
            L   L ++ C A+     +TLVLL+  A +ETHSIFFKSL++RG KLTY LADDSSL+L+
Sbjct: 7    LIAVLAIAHCQAVLETDANTLVLLDNLAIRETHSIFFKSLQDRGFKLTYKLADDSSLLLS 66

Query: 227  KFGEYLYKNVIIFAPSVREFGGKIDVPTLMNFVDEGGNILVAASSKIGEAIRELGSECGI 406
            K+GEYLYKNVIIFAPSV EFGG + V  L  FVD+GGN+LVA S K G+A+RE  SECG 
Sbjct: 67   KYGEYLYKNVIIFAPSVEEFGGDVSVERLAQFVDDGGNVLVAGSEKSGDALREFASECGF 126

Query: 407  EFDEEKTAVIDHHNFDRKDDGKHTLIIADEANVAKIPIIVGKVD-----SPVLFKGVGIA 571
            E DEE  AVIDH ++D  D G+HT I+    N+ +   IVGK +     +P+L++G G+ 
Sbjct: 127  ELDEENAAVIDHLHYDVSDAGEHTTILTSAKNLIQADTIVGKANRQADAAPLLYRGTGLI 186

Query: 572  ADDQNPLLINLLHASSSAYSFNPDKPVDDYPNSVGINTQLITALQARNNARVLFVGSLDL 751
            AD +NPL++ LL A S+AYS+NP+  V DYP++VG  T LI ALQARNNARV+F GSL  
Sbjct: 187  ADKENPLVLKLLTAESTAYSYNPEASVSDYPHAVGRGTLLIAALQARNNARVVFSGSLLF 246

Query: 752  FSDDLFTASVEHAISKQTHARSGNEALATAISKWVFKETGVLRVGNVSHSLADKSVENPR 931
            FSD+ FT +V++A S   H  +GN  +A +ISKWVF ETG LRV +V H    + +   +
Sbjct: 247  FSDESFTTAVQYAQSGVFHKLAGNRDVAESISKWVFGETGRLRVASVQHHKEGELLPPDQ 306

Query: 932  EYTIMENVHYEIVIDELRADGTWTPFIADDVQLEFYRIDPFVRQNMLR-KEGKFYLDFKL 1108
             YTI + V Y I I+EL   G W  F A D+QLEF RIDPFVR  + +   G +   FK+
Sbjct: 307  AYTITDPVVYTIGIEEL-VQGEWRAFKASDIQLEFVRIDPFVRTYLKQTNTGAYQAKFKI 365

Query: 1109 PDVYGVFKFLVDYHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVIL 1288
            PDVYGV++F VDY+RVGYTH++S+TQVSVRPL HTQYERFI +A+PYY SA SMM+GV +
Sbjct: 366  PDVYGVYQFKVDYNRVGYTHLYSTTQVSVRPLEHTQYERFIPSAFPYYTSAFSMMIGVFV 425

Query: 1289 FSFLFLYFKDD 1321
            FSF+FL+FKD+
Sbjct: 426  FSFVFLHFKDE 436

>sp|P45971|OST48_CAEEL Probable dolichyl-diphosphooligosaccharide--protein
            glycosyltransferase 48 kDa subunit precursor
            (Oligosaccharyl transferase 48 kDa subunit)
          Length = 445

 Score =  401 bits (1030), Expect = e-111
 Identities = 210/428 (49%), Positives = 278/428 (64%), Gaps = 3/428 (0%)
 Frame = +2

Query: 56   LFLFVSLCVSSCFAIDTLVLLETFATKETHSIFFKSLRERGHKLTYHLADDSSLILNKFG 235
            L L  S+      A   LVL ET A K+THS+F  S++ERGH+LT   ADDS L L K G
Sbjct: 7    LLLIASIGFHQSLADRVLVLGETAAVKDTHSVFLNSVKERGHELTVRAADDSQLALFKHG 66

Query: 236  EYLYKNVIIFAPSVREFGGKIDVPTLMNFVDEGGNILVAASSKIGEAIRELGSECGIEFD 415
            + ++ ++ I AP V+ FGG +    +  FVD GGN+LVAA S IG+A+RE+ +E G EF+
Sbjct: 67   QLIFDHLFILAPGVQVFGGSLSPSEISKFVDAGGNVLVAAGSNIGDALREIAAEHGFEFE 126

Query: 416  EEKTAVIDHHNFDRK-DDGKHTLIIADEANVAKIPIIVGKVDS--PVLFKGVGIAADDQN 586
            E  T+VIDHHN+D+  D G HT ++  +  +    +IVG      PVLFKG+G+ A   N
Sbjct: 127  EAGTSVIDHHNYDQTLDSGDHTTLVVGKDQLISAELIVGNSAKLHPVLFKGIGLVAGKTN 186

Query: 587  PLLINLLHASSSAYSFNPDKPVDDYPNSVGINTQLITALQARNNARVLFVGSLDLFSDDL 766
             L ++++ AS +AYS++P       P+  G  T L+  LQ+RNNAR++F GS +LFS+  
Sbjct: 187  NLALSIVRASGTAYSYDPKAVRATNPSIAGSRTLLVGGLQSRNNARIVFTGSSELFSNTF 246

Query: 767  FTASVEHAISKQTHARSGNEALATAISKWVFKETGVLRVGNVSHSLADKSVENpreYTIM 946
            F+A           A+SGN   ATAI++WV KE+GVLRV  V+H    ++V     Y I 
Sbjct: 247  FSAKTNSVNPSVQGAQSGNADFATAITRWVMKESGVLRVKTVNHHKKGETVPPVEGYFIT 306

Query: 947  ENVHYEIVIDELRADGTWTPFIADDVQLEFYRIDPFVRQNMLRKEGKFYLDFKLPDVYGV 1126
            E+V Y I I+EL+ +G W PF   DVQLEF RIDPFVR  +    G+  + FKLPDV GV
Sbjct: 307  EDVVYTIEIEELK-NGKWVPFQGKDVQLEFVRIDPFVRATLKNSNGRLSVAFKLPDVLGV 365

Query: 1127 FKFLVDYHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFSFLFL 1306
            FKFLVDY RVGYTH++   QVSVRPL HTQYERFI++AYPYYAS+ SMM G++LFS ++L
Sbjct: 366  FKFLVDYRRVGYTHLYDVQQVSVRPLWHTQYERFIRSAYPYYASSFSMMAGLVLFSIVYL 425

Query: 1307 YFKDDKEK 1330
            Y KD   K
Sbjct: 426  YHKDTPVK 433

>sp|Q29381|OST48_PIG Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
           kDa subunit (Oligosaccharyl transferase 48 kDa subunit)
           (DDOST 48 kDa subunit)
          Length = 103

 Score =  123 bits (308), Expect = 1e-27
 Identities = 58/100 (58%), Positives = 77/100 (77%)
 Frame = +2

Query: 104 TLVLLETFATKETHSIFFKSLRERGHKLTYHLADDSSLILNKFGEYLYKNVIIFAPSVRE 283
           T VLL+    +ETHS+FF+SL++RG  LT+  ADD SL L K+GE+LY N+I+F+PSV +
Sbjct: 4   TXVLLDNLNLRETHSLFFRSLKDRGFVLTFKTADDPSLSLIKYGEFLYDNLIVFSPSVED 63

Query: 284 FGGKIDVPTLMNFVDEGGNILVAASSKIGEAIRELGSECG 403
           FGG I+V T+  F+D GG+ LVAASS IG+ +R LGSECG
Sbjct: 64  FGGNINVETISTFIDGGGSXLVAASSDIGDPLRXLGSECG 103

>sp|P33767|OSTB_YEAST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase beta
            subunit precursor (Oligosaccharyl transferase beta
            subunit)
          Length = 430

 Score =  117 bits (294), Expect = 6e-26
 Identities = 102/431 (23%), Positives = 189/431 (43%), Gaps = 13/431 (3%)
 Frame = +2

Query: 53   FLFLFVSLCVSSCFAIDTLVLLETFATK-ETHSIFFKSLRERGHKLTYHLADDSSLILNK 229
            F  L  ++ V       TLVL +      E +S++ K L +R +KL Y   + +S  ++ 
Sbjct: 9    FCILLQAIFVVGTQTSRTLVLYDQSTEPLEEYSVYLKDLEQRNYKLEYLDINSTSTTVDL 68

Query: 230  FG--EYLYKNVIIF-APSVREFGGKIDVPTLMNFVDEGGNILVAAS-SKIGEAIRELGSE 397
            +   + L+ N+I+F     +    +I V  L+ F +  GNIL  +S   +   IR   +E
Sbjct: 69   YDKEQRLFDNIIVFPTKGGKNLARQIPVKQLIKFFENEGNILCMSSPGAVPNTIRLFLNE 128

Query: 398  CGIEFDEEKTAVIDHHNFDRKDDGKHTLIIADEANVAKIPIIVGKVDSPVLFKGVGIAAD 577
             GI    +   + D+ +   ++      ++    ++    +   +     +F     A  
Sbjct: 129  LGIYPSPKGHVIRDYFSPSSEE------LVVSSNHLLNKYVYNARKSEDFVFGESSAALL 182

Query: 578  DQNPLLINLLHASSSAYSFNPDKPVDDYPNSVGINTQLITALQARNNARVLFVGSLDLFS 757
            +    ++ +L+A  ++++ +  K       S G    L+   Q  NNAR++++GS D   
Sbjct: 183  ENREQIVPILNAPRTSFTESKGKCNSWTSGSQGF---LVVGFQNLNNARLVWIGSSDFLK 239

Query: 758  DDLFTASVEHAISKQTHARSGNEALATAISKWVFKETGVLRVGNVSHSLADKSVENpreY 937
            +                 +  N+  A  + KW F E  V++  +  HS AD +  +   Y
Sbjct: 240  NK---------------NQDSNQEFAKELLKWTFNEKSVIKSVHAVHSHADGTSYDEEPY 284

Query: 938  TIMENVHYEIVIDELRADGTWTPFIADDVQLEFYRIDPFVRQNMLRK----EGKFYL--D 1099
             I + V Y +   E   +  W P IADD+Q E  ++DP+ R  +       E ++Y   +
Sbjct: 285  KIKDKVIYSVGFSEWNGE-EWLPHIADDIQFELRQVDPYYRLTLSPSGNDSETQYYTTGE 343

Query: 1100 FKLPDVYGVFKFLVDYHRVGYTHVHSSTQVSVRPLMHTQYERF--IQAAYPYYASAISMM 1273
            F LPD +GVF FL DY ++G +        ++R L + +Y R   I  ++ Y ++   ++
Sbjct: 344  FILPDRHGVFTFLTDYRKIGLSFTTDKDVKAIRHLANDEYPRSWEISNSWVYISAICGVI 403

Query: 1274 VGVILFSFLFL 1306
            V  I F   F+
Sbjct: 404  VAWIFFVVSFV 414

>sp|Q01811|VNSS_INSVN Nonstructural protein NS-S
          Length = 449

 Score = 35.4 bits (80), Expect = 0.40
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 15/138 (10%)
 Frame = -2

Query: 420 SSSNSIPHSLPNSLIASPILELAATKILPPSST-KFIKVGTSIFPPNSLTDGANM----- 259
           +++N + H     +++S +L +   +I  P  T +F    + IFPPN+  + AN      
Sbjct: 104 TNTNGVKHQGHLKVLSSQLLRMLEEQIAVPEITSRFGLKESDIFPPNNFIEAANKGSLSC 163

Query: 258 ---MTFLYKYSPN--LFKIS----EESSAKW*VNLCPRSRSDLKNIECVSLVANVSNSTK 106
              + F  KYS N  + K+S      S  +W   L P       N   V+ +A  S +  
Sbjct: 164 VKEVLFDVKYSNNQSMGKVSVLSPTRSVHEWLYTLKPVFNQSQTNNRTVNTLAVKSLAMS 223

Query: 105 VSIAKHEETHKLTKRNKN 52
            +     +TH   + N N
Sbjct: 224 ATSDLMSDTHSFVRLNNN 241

>sp|Q6KHS4|RS7_MYCMO 30S ribosomal protein S7
          Length = 156

 Score = 35.4 bits (80), Expect = 0.40
 Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
 Frame = -2

Query: 366 ILELAATKILPPSSTKFIKVGTSIFPPNSLTDGANMMTFLYKYSPNLFKISEES-SAKW* 190
           + +LA   I P    K  +VG           G N     Y+    + K  +E+ S +W 
Sbjct: 61  VFQLALDNITPQLEVKTRRVG-----------GTN-----YQVPMEVTKRRKETLSLRWL 104

Query: 189 VNLCPRSRSDLKNIECVSL-VANVSNSTKVSIAKHEETHKLTKRNKNF 49
           ++   R RS+    EC++  + + SN T  SI K E+THK+ + NK F
Sbjct: 105 IHYS-RLRSEKTMQECLANEIIDASNKTGSSIKKREDTHKMAEANKAF 151

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,905,727
Number of Sequences: 369166
Number of extensions: 3128279
Number of successful extensions: 9134
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9080
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 16647906880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00401

  1. Dr_sW_018_K18
  2. Dr_sW_010_L16
  3. Dr_sW_018_J20
  4. Dr_sW_015_K06
  5. Dr_sW_011_B12
  6. Dr_sW_003_D14
  7. Dr_sW_014_A10
  8. Dr_sW_009_K13
  9. Dr_sW_006_L01