Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_A10
(302 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q05052|OST48_CANFA Dolichyl-diphosphooligosaccharide--pr... 114 9e-26
sp|Q24319|OST48_DROME Dolichyl-diphosphooligosaccharide--pr... 113 1e-25
sp|P48440|OST48_CHICK Dolichyl-diphosphooligosaccharide--pr... 112 3e-25
sp|O54734|OST48_MOUSE Dolichyl-diphosphooligosaccharide--pr... 112 3e-25
sp|P39656|OST48_HUMAN Dolichyl-diphosphooligosaccharide--pr... 110 1e-24
sp|P45971|OST48_CAEEL Probable dolichyl-diphosphooligosacch... 108 4e-24
sp|P33767|OSTB_YEAST Dolichyl-diphosphooligosaccharide--pro... 33 0.16
sp|Q15911|ATBF1_HUMAN Alpha-fetoprotein enhancer binding pr... 30 2.3
sp|P10192|HEPA_HHV11 DNA helicase/primase complex associate... 29 3.0
sp|Q92870|APBB2_HUMAN Amyloid beta A4 precursor protein-bin... 29 3.0
>sp|Q05052|OST48_CANFA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit precursor (Oligosaccharyl transferase 48 kDa
subunit)
Length = 445
Score = 114 bits (284), Expect = 9e-26
Identities = 53/74 (71%), Positives = 66/74 (89%)
Frame = +3
Query: 15 VYGVFKFLVDYHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFS 194
VYGVF+F VDY+R+GYTH+HSSTQVSVRPL HTQYERFI +AYPYYASA SMM+G+ +FS
Sbjct: 373 VYGVFQFKVDYNRLGYTHLHSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFS 432
Query: 195 FLFLYFKDDKEKNE 236
+FL+ K +KEK++
Sbjct: 433 TVFLHMK-EKEKSD 445
>sp|Q24319|OST48_DROME Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit precursor (Oligosaccharyl transferase 48 kDa
subunit) (DDOST 48 kDa subunit) (OST5OP) (DrOST)
(DmOST50)
Length = 449
Score = 113 bits (283), Expect = 1e-25
Identities = 50/69 (72%), Positives = 63/69 (91%)
Frame = +3
Query: 15 VYGVFKFLVDYHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFS 194
VYGV++F VDY+RVGYTH++S+TQVSVRPL HTQYERFI +A+PYY SA SMM+GV +FS
Sbjct: 368 VYGVYQFKVDYNRVGYTHLYSTTQVSVRPLEHTQYERFIPSAFPYYTSAFSMMIGVFVFS 427
Query: 195 FLFLYFKDD 221
F+FL+FKD+
Sbjct: 428 FVFLHFKDE 436
>sp|P48440|OST48_CHICK Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit (Oligosaccharyl transferase 48 kDa subunit)
(OST 50 kDa subunit) (DDOST 48 kDa subunit)
Length = 413
Score = 112 bits (279), Expect = 3e-25
Identities = 52/74 (70%), Positives = 65/74 (87%)
Frame = +3
Query: 15 VYGVFKFLVDYHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFS 194
VYGVF+F VDY+R+GYTH++SSTQVSVRPL HTQYERFI +AYPYYA A SMMVG+ +FS
Sbjct: 341 VYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYAGAFSMMVGLFMFS 400
Query: 195 FLFLYFKDDKEKNE 236
+FL+ K +KEK++
Sbjct: 401 IVFLHMK-EKEKSD 413
>sp|O54734|OST48_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit precursor (Oligosaccharyl transferase 48 kDa
subunit) (DDOST 48 kDa subunit)
Length = 441
Score = 112 bits (279), Expect = 3e-25
Identities = 52/74 (70%), Positives = 65/74 (87%)
Frame = +3
Query: 15 VYGVFKFLVDYHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFS 194
VYGVF+F VDY+R+GYTH++SSTQVSVRPL HTQYERFI +AYPYYASA SMM G+ +FS
Sbjct: 369 VYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMAGLFIFS 428
Query: 195 FLFLYFKDDKEKNE 236
+FL+ K +KEK++
Sbjct: 429 IVFLHMK-EKEKSD 441
>sp|P39656|OST48_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit precursor (Oligosaccharyl transferase 48 kDa
subunit) (DDOST 48 kDa subunit)
Length = 439
Score = 110 bits (275), Expect = 1e-24
Identities = 51/74 (68%), Positives = 65/74 (87%)
Frame = +3
Query: 15 VYGVFKFLVDYHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFS 194
VYGVF+F VDY+R+GYTH++SSTQVSVRPL HTQYERFI +AYPYYASA MM+G+ +FS
Sbjct: 367 VYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFPMMLGLFIFS 426
Query: 195 FLFLYFKDDKEKNE 236
+FL+ K +KEK++
Sbjct: 427 IVFLHMK-EKEKSD 439
>sp|P45971|OST48_CAEEL Probable dolichyl-diphosphooligosaccharide--protein
glycosyltransferase 48 kDa subunit precursor
(Oligosaccharyl transferase 48 kDa subunit)
Length = 445
Score = 108 bits (270), Expect = 4e-24
Identities = 50/72 (69%), Positives = 59/72 (81%)
Frame = +3
Query: 15 VYGVFKFLVDYHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFS 194
V GVFKFLVDY RVGYTH++ QVSVRPL HTQYERFI++AYPYYAS+ SMM G++LFS
Sbjct: 362 VLGVFKFLVDYRRVGYTHLYDVQQVSVRPLWHTQYERFIRSAYPYYASSFSMMAGLVLFS 421
Query: 195 FLFLYFKDDKEK 230
++LY KD K
Sbjct: 422 IVYLYHKDTPVK 433
>sp|P33767|OSTB_YEAST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase beta
subunit precursor (Oligosaccharyl transferase beta
subunit)
Length = 430
Score = 33.5 bits (75), Expect = 0.16
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 18 YGVFKFLVDYHRVGYTHVHSSTQVSVRPLMHTQYERF--IQAAYPYYASAISMMVGVILF 191
+GVF FL DY ++G + ++R L + +Y R I ++ Y ++ ++V I F
Sbjct: 350 HGVFTFLTDYRKIGLSFTTDKDVKAIRHLANDEYPRSWEISNSWVYISAICGVIVAWIFF 409
Query: 192 SFLFL 206
F+
Sbjct: 410 VVSFV 414
>sp|Q15911|ATBF1_HUMAN Alpha-fetoprotein enhancer binding protein (AT motif-binding
factor) (AT-binding transcription factor 1)
Length = 3703
Score = 29.6 bits (65), Expect = 2.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 212 EVEEQETEQNDSDHHGDGARVVGISSLDEALVLRVHQGP 96
E EE+E E+ + + +G + + S LDE L R H+ P
Sbjct: 473 EEEEEEEEEEEEEEEDEGCKGLFPSELDEELEDRPHEEP 511
>sp|P10192|HEPA_HHV11 DNA helicase/primase complex associated protein
Length = 750
Score = 29.3 bits (64), Expect = 3.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 65 SRAQLHPGVGAALDAHAIRALHPGCLSL 148
+R + VGA L A+A+R HP CL+L
Sbjct: 527 ARRAIETAVGAVLRANAVRLRHPLCLAL 554
>sp|Q92870|APBB2_HUMAN Amyloid beta A4 precursor protein-binding family B member 2
(Fe65-like protein)
Length = 758
Score = 29.3 bits (64), Expect = 3.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 242 QSFVLFFVILEVEEQETEQNDSDHHG 165
+SF+ ++ LE +E EQN +HHG
Sbjct: 159 KSFLNYYADLETSARELEQNQGNHHG 184
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,907,320
Number of Sequences: 369166
Number of extensions: 533363
Number of successful extensions: 1602
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1597
length of database: 68,354,980
effective HSP length: 69
effective length of database: 55,608,265
effective search space used: 1723856215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)