Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_K13
(447 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q05052|OST48_CANFA Dolichyl-diphosphooligosaccharide--pr... 171 7e-43
sp|O54734|OST48_MOUSE Dolichyl-diphosphooligosaccharide--pr... 170 1e-42
sp|P48440|OST48_CHICK Dolichyl-diphosphooligosaccharide--pr... 169 2e-42
sp|P39656|OST48_HUMAN Dolichyl-diphosphooligosaccharide--pr... 167 1e-41
sp|P45971|OST48_CAEEL Probable dolichyl-diphosphooligosacch... 159 3e-39
sp|Q24319|OST48_DROME Dolichyl-diphosphooligosaccharide--pr... 154 9e-38
sp|P33767|OSTB_YEAST Dolichyl-diphosphooligosaccharide--pro... 61 1e-09
sp|O78432|YCF30_GUITH Putative HTH-type transcriptional reg... 33 0.29
sp|Q4IR18|GRC3_GIBZE Protein GRC3 30 2.4
sp|Q15911|ATBF1_HUMAN Alpha-fetoprotein enhancer binding pr... 30 3.2
>sp|Q05052|OST48_CANFA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit precursor (Oligosaccharyl transferase 48 kDa
subunit)
Length = 445
Score = 171 bits (433), Expect = 7e-43
Identities = 82/124 (66%), Positives = 104/124 (83%)
Frame = +1
Query: 10 IVIDELRADGTWTPFIADDVQLEFYRIDPFVRQNMLRKEGKFYLDFKLPDVYGVFKFLVD 189
IVI++L ++G W PF DD+QLEF RIDPFVR + +K GK+ + FKLPDVYGVF+F VD
Sbjct: 324 IVIEQL-SNGRWVPFDGDDIQLEFVRIDPFVRTFLKKKGGKYSVQFKLPDVYGVFQFKVD 382
Query: 190 YHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFSFLFLYFKDDK 369
Y+R+GYTH+HSSTQVSVRPL HTQYERFI +AYPYYASA SMM+G+ +FS +FL+ K +K
Sbjct: 383 YNRLGYTHLHSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFSTVFLHMK-EK 441
Query: 370 EKNE 381
EK++
Sbjct: 442 EKSD 445
>sp|O54734|OST48_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit precursor (Oligosaccharyl transferase 48 kDa
subunit) (DDOST 48 kDa subunit)
Length = 441
Score = 170 bits (431), Expect = 1e-42
Identities = 82/124 (66%), Positives = 103/124 (83%)
Frame = +1
Query: 10 IVIDELRADGTWTPFIADDVQLEFYRIDPFVRQNMLRKEGKFYLDFKLPDVYGVFKFLVD 189
IVI++L ++G W PF DD+QLEF RIDPFVR + RK GK+ + FKLPDVYGVF+F VD
Sbjct: 320 IVIEQL-SNGKWVPFDGDDIQLEFVRIDPFVRTFLKRKGGKYSVQFKLPDVYGVFQFKVD 378
Query: 190 YHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFSFLFLYFKDDK 369
Y+R+GYTH++SSTQVSVRPL HTQYERFI +AYPYYASA SMM G+ +FS +FL+ K +K
Sbjct: 379 YNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMAGLFIFSIVFLHMK-EK 437
Query: 370 EKNE 381
EK++
Sbjct: 438 EKSD 441
>sp|P48440|OST48_CHICK Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit (Oligosaccharyl transferase 48 kDa subunit)
(OST 50 kDa subunit) (DDOST 48 kDa subunit)
Length = 413
Score = 169 bits (429), Expect = 2e-42
Identities = 82/124 (66%), Positives = 102/124 (82%)
Frame = +1
Query: 10 IVIDELRADGTWTPFIADDVQLEFYRIDPFVRQNMLRKEGKFYLDFKLPDVYGVFKFLVD 189
IVI++L +DG W PF DD+QLEF RIDPFVR + R GK+ + FKLPDVYGVF+F VD
Sbjct: 292 IVIEKL-SDGKWIPFDGDDIQLEFVRIDPFVRTFLKRNGGKYSVQFKLPDVYGVFQFKVD 350
Query: 190 YHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFSFLFLYFKDDK 369
Y+R+GYTH++SSTQVSVRPL HTQYERFI +AYPYYA A SMMVG+ +FS +FL+ K +K
Sbjct: 351 YNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYAGAFSMMVGLFMFSIVFLHMK-EK 409
Query: 370 EKNE 381
EK++
Sbjct: 410 EKSD 413
>sp|P39656|OST48_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit precursor (Oligosaccharyl transferase 48 kDa
subunit) (DDOST 48 kDa subunit)
Length = 439
Score = 167 bits (422), Expect = 1e-41
Identities = 80/124 (64%), Positives = 102/124 (82%)
Frame = +1
Query: 10 IVIDELRADGTWTPFIADDVQLEFYRIDPFVRQNMLRKEGKFYLDFKLPDVYGVFKFLVD 189
IVI +L ++G W PF DD+QLEF RIDPFVR + +K GK+ + FKLPDVYGVF+F VD
Sbjct: 318 IVIQQL-SNGKWVPFDGDDIQLEFVRIDPFVRTFLKKKGGKYSVQFKLPDVYGVFQFKVD 376
Query: 190 YHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFSFLFLYFKDDK 369
Y+R+GYTH++SSTQVSVRPL HTQYERFI +AYPYYASA MM+G+ +FS +FL+ K +K
Sbjct: 377 YNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFPMMLGLFIFSIVFLHMK-EK 435
Query: 370 EKNE 381
EK++
Sbjct: 436 EKSD 439
>sp|P45971|OST48_CAEEL Probable dolichyl-diphosphooligosaccharide--protein
glycosyltransferase 48 kDa subunit precursor
(Oligosaccharyl transferase 48 kDa subunit)
Length = 445
Score = 159 bits (401), Expect = 3e-39
Identities = 77/122 (63%), Positives = 92/122 (75%)
Frame = +1
Query: 10 IVIDELRADGTWTPFIADDVQLEFYRIDPFVRQNMLRKEGKFYLDFKLPDVYGVFKFLVD 189
I I+EL+ +G W PF DVQLEF RIDPFVR + G+ + FKLPDV GVFKFLVD
Sbjct: 313 IEIEELK-NGKWVPFQGKDVQLEFVRIDPFVRATLKNSNGRLSVAFKLPDVLGVFKFLVD 371
Query: 190 YHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFSFLFLYFKDDK 369
Y RVGYTH++ QVSVRPL HTQYERFI++AYPYYAS+ SMM G++LFS ++LY KD
Sbjct: 372 YRRVGYTHLYDVQQVSVRPLWHTQYERFIRSAYPYYASSFSMMAGLVLFSIVYLYHKDTP 431
Query: 370 EK 375
K
Sbjct: 432 VK 433
>sp|Q24319|OST48_DROME Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48
kDa subunit precursor (Oligosaccharyl transferase 48 kDa
subunit) (DDOST 48 kDa subunit) (OST5OP) (DrOST)
(DmOST50)
Length = 449
Score = 154 bits (389), Expect = 9e-38
Identities = 75/120 (62%), Positives = 94/120 (78%), Gaps = 1/120 (0%)
Frame = +1
Query: 10 IVIDELRADGTWTPFIADDVQLEFYRIDPFVRQNMLRKE-GKFYLDFKLPDVYGVFKFLV 186
I I+EL G W F A D+QLEF RIDPFVR + + G + FK+PDVYGV++F V
Sbjct: 318 IGIEEL-VQGEWRAFKASDIQLEFVRIDPFVRTYLKQTNTGAYQAKFKIPDVYGVYQFKV 376
Query: 187 DYHRVGYTHVHSSTQVSVRPLMHTQYERFIQAAYPYYASAISMMVGVILFSFLFLYFKDD 366
DY+RVGYTH++S+TQVSVRPL HTQYERFI +A+PYY SA SMM+GV +FSF+FL+FKD+
Sbjct: 377 DYNRVGYTHLYSTTQVSVRPLEHTQYERFIPSAFPYYTSAFSMMIGVFVFSFVFLHFKDE 436
>sp|P33767|OSTB_YEAST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase beta
subunit precursor (Oligosaccharyl transferase beta
subunit)
Length = 430
Score = 60.8 bits (146), Expect = 1e-09
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Frame = +1
Query: 43 WTPFIADDVQLEFYRIDPFVRQNMLRK----EGKFYL--DFKLPDVYGVFKFLVDYHRVG 204
W P IADD+Q E ++DP+ R + E ++Y +F LPD +GVF FL DY ++G
Sbjct: 304 WLPHIADDIQFELRQVDPYYRLTLSPSGNDSETQYYTTGEFILPDRHGVFTFLTDYRKIG 363
Query: 205 YTHVHSSTQVSVRPLMHTQYERF--IQAAYPYYASAISMMVGVILFSFLFL 351
+ ++R L + +Y R I ++ Y ++ ++V I F F+
Sbjct: 364 LSFTTDKDVKAIRHLANDEYPRSWEISNSWVYISAICGVIVAWIFFVVSFV 414
>sp|O78432|YCF30_GUITH Putative HTH-type transcriptional regulator ycf30
Length = 310
Score = 33.1 bits (74), Expect = 0.29
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 13 VIDELRADGTWTPFIADDVQLEFYRIDPFVRQNMLRKEGKFYLDFKLPDVYGVFKFLVD 189
V DELR+ TP++ D++ L ++ PF + +++KE + L F D + ++D
Sbjct: 155 VPDELRSKLQITPYVDDELALILPKLHPFSKLEVIQKEDLYRLRFITLDKQSTIRRVID 213
>sp|Q4IR18|GRC3_GIBZE Protein GRC3
Length = 796
Score = 30.0 bits (66), Expect = 2.4
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = -1
Query: 366 VILEVEEQETEQNDSDHHGDGARVVGISSLDEALVLRVHQGPHRHLGGXXXXXXXXXXXV 187
++LEV E++TE + S +GA G+S L E + V +G R G
Sbjct: 658 MVLEVTEEDTEDDQSGVEPEGAD--GVSDLTEVPWVEVLKGSQRRPVGSQVWRPLRHLGR 715
Query: 186 NEELEHAVHVGQ 151
N ++ V VG+
Sbjct: 716 NNTGDYEVKVGE 727
>sp|Q15911|ATBF1_HUMAN Alpha-fetoprotein enhancer binding protein (AT motif-binding
factor) (AT-binding transcription factor 1)
Length = 3703
Score = 29.6 bits (65), Expect = 3.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 357 EVEEQETEQNDSDHHGDGARVVGISSLDEALVLRVHQGP 241
E EE+E E+ + + +G + + S LDE L R H+ P
Sbjct: 473 EEEEEEEEEEEEEEEDEGCKGLFPSELDEELEDRPHEEP 511
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,692,952
Number of Sequences: 369166
Number of extensions: 881793
Number of successful extensions: 2715
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2708
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2394311040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)