Planaria EST Database

DrC_00034

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00034
         (1128 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q04820|MDHC_ECHGR  Malate dehydrogenase, cytoplasmic           378   e-104
sp|P11708|MDHC_PIG  Malate dehydrogenase, cytoplasmic             376   e-104
sp|P40925|MDHC_HUMAN  Malate dehydrogenase, cytoplasmic           374   e-103
sp|P14152|MDHC_MOUSE  Malate dehydrogenase, cytoplasmic           371   e-102
sp|P57106|MDHD_ARATH  Malate dehydrogenase, cytoplasmic 2         334   3e-91
sp|P93819|MDHC1_ARATH  Malate dehydrogenase, cytoplasmic 1        332   9e-91
sp|O24047|MDHC_MESCR  Malate dehydrogenase, cytoplasmic           332   1e-90
sp|O48905|MDHC_MEDSA  Malate dehydrogenase, cytoplasmic           330   3e-90
sp|Q9SML8|MDHC_BETVU  Malate dehydrogenase, cytoplasmic           330   6e-90
sp|Q08062|MDHC_MAIZE  Malate dehydrogenase, cytoplasmic           327   3e-89

>sp|Q04820|MDHC_ECHGR Malate dehydrogenase, cytoplasmic
          Length = 332

 Score =  378 bits (970), Expect = e-104
 Identities = 195/330 (59%), Positives = 238/330 (72%), Gaps = 3/330 (0%)
 Frame = +1

Query: 4   MTPPITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDC 183
           M  P+ V++TGAAGQI Y L + VA+GN+FG+ Q I LHLLDIP+    L+G++MEL+DC
Sbjct: 1   MPGPLRVLITGAAGQIAYNLSNMVANGNLFGKDQQIILHLLDIPEAKTVLDGVVMELQDC 60

Query: 184 AFPQLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYA 363
           AF  L  +  T  L+EAF D+D ALMVGAMPRK+GMER+DLL +NV IFK QGEALDKYA
Sbjct: 61  AFTVLAGIVPTHCLKEAFTDIDVALMVGAMPRKQGMERRDLLSSNVKIFKEQGEALDKYA 120

Query: 364 KKTVRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRR 543
           KKTV+V VVGNPANTNCLIMSKYAPSIPKENF+ALTRLDHNRAI Q+A KAGVP   V+ 
Sbjct: 121 KKTVKVLVVGNPANTNCLIMSKYAPSIPKENFTALTRLDHNRAIYQVAAKAGVPNTCVKN 180

Query: 544 CIIWGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXX 723
             IWGNHSN Q+PD  H +V   DGK+    + + DE W+K  F+  VQ RGAAVI    
Sbjct: 181 VCIWGNHSNKQFPDLSHAVVT-KDGKQHPAKELINDEKWVKEVFIPCVQNRGAAVIGLRK 239

Query: 724 XXXXXXXXXXXXDHCRDWFHGTK--EWVSMAVYSDGS-YGVPKDVIFSFPVTIEHGKWHI 894
                       D  RDW+ GTK  EWVSM+VYS G  YG PKD+ FSFPVTI+ G + +
Sbjct: 240 LSRAASAAKAIVDQMRDWWFGTKEGEWVSMSVYSTGDHYGAPKDIYFSFPVTIKDGHYKV 299

Query: 895 VQGLTIDDFSRGKLELTGKELIEERDQALA 984
           V GL++D++SR    L+  EL++ER+ ALA
Sbjct: 300 VDGLSMDEWSRSLFNLSADELVDEREVALA 329

>sp|P11708|MDHC_PIG Malate dehydrogenase, cytoplasmic
          Length = 334

 Score =  376 bits (966), Expect = e-104
 Identities = 200/333 (60%), Positives = 244/333 (73%), Gaps = 3/333 (0%)
 Frame = +1

Query: 4   MTPPITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDC 183
           M+ PI V++TGAAGQI Y L++S+ +G+VFG+ QPI L LLDI  M+  L+G++MEL+DC
Sbjct: 1   MSEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC 60

Query: 184 AFPQLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYA 363
           A P L  V AT   + AF D+D A++VG+MPR++GMERKDLLKANV IFK QG ALDKYA
Sbjct: 61  ALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA 120

Query: 364 KKTVRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRR 543
           KK+V+V VVGNPANTNCL  SK APSIPKENFS LTRLDHNRA AQIA K GV  D V+ 
Sbjct: 121 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKN 180

Query: 544 CIIWGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXX 723
            IIWGNHS+TQYPD +H  VK    KEV V +AVKD++WLK +F+ TVQ RGAAVI    
Sbjct: 181 VIIWGNHSSTQYPDVNHAKVK-LQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARK 239

Query: 724 XXXXXXXXXXXXDHCRDWFHGTK--EWVSMAVYSDG-SYGVPKDVIFSFPVTIEHGKWHI 894
                       DH RD + GT   E+VSM + SDG SYGVP D+++SFPVTI+   W I
Sbjct: 240 LSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKI 299

Query: 895 VQGLTIDDFSRGKLELTGKELIEERDQALAFCS 993
           V+GL I+DFSR K++LT KEL EE++ A  F S
Sbjct: 300 VEGLPINDFSREKMDLTAKELAEEKETAFEFLS 332

>sp|P40925|MDHC_HUMAN Malate dehydrogenase, cytoplasmic
          Length = 334

 Score =  374 bits (960), Expect = e-103
 Identities = 199/333 (59%), Positives = 243/333 (72%), Gaps = 3/333 (0%)
 Frame = +1

Query: 4   MTPPITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDC 183
           M+ PI V++TGAAGQI Y L++S+ +G+VFG+ QPI L LLDI  M+  L+G++MEL+DC
Sbjct: 1   MSEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC 60

Query: 184 AFPQLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYA 363
           A P L  V AT     AF D+D A++VG+MPR+EGMERKDLLKANV IFK QG ALDKYA
Sbjct: 61  ALPLLKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYA 120

Query: 364 KKTVRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRR 543
           KK+V+V VVGNPANTNCL  SK APSIPKENFS LTRLDHNRA AQIA K GV  + V+ 
Sbjct: 121 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKN 180

Query: 544 CIIWGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXX 723
            IIWGNHS+TQYPD +H  VK   GKEV V +A+KD++WLK +F+ TVQ RGAAVI    
Sbjct: 181 VIIWGNHSSTQYPDVNHAKVK-LQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARK 239

Query: 724 XXXXXXXXXXXXDHCRDWFHGTK--EWVSMAVYSDG-SYGVPKDVIFSFPVTIEHGKWHI 894
                       DH RD + GT   E+VSM V SDG SYGVP D+++SFPV I++  W  
Sbjct: 240 LSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKF 299

Query: 895 VQGLTIDDFSRGKLELTGKELIEERDQALAFCS 993
           V+GL I+DFSR K++LT KEL EE++ A  F S
Sbjct: 300 VEGLPINDFSREKMDLTAKELTEEKESAFEFLS 332

>sp|P14152|MDHC_MOUSE Malate dehydrogenase, cytoplasmic
          Length = 334

 Score =  371 bits (952), Expect = e-102
 Identities = 197/333 (59%), Positives = 243/333 (72%), Gaps = 3/333 (0%)
 Frame = +1

Query: 4   MTPPITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDC 183
           M+ PI V++TGAAGQI Y L++S+ +G+VFG+ QPI L LLDI  M+  L+G++MEL+DC
Sbjct: 1   MSEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC 60

Query: 184 AFPQLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYA 363
           A P L  V AT   + AF D+D A++VG+MPR+EGMERKDLLKANV IFK QG AL+KYA
Sbjct: 61  ALPLLQDVIATDKEEIAFKDLDVAVLVGSMPRREGMERKDLLKANVKIFKSQGTALEKYA 120

Query: 364 KKTVRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRR 543
           KK+V+V VVGNPANTNCL  SK APSIPKENFS LTRLDHNRA +QIA K GV  D V+ 
Sbjct: 121 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTADDVKN 180

Query: 544 CIIWGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXX 723
            IIWGNHS+TQYPD +H  VK   GKEV V +A+KD++WLK +F+ TVQ RGAAVI    
Sbjct: 181 VIIWGNHSSTQYPDVNHAKVK-LQGKEVGVYEALKDDSWLKGEFITTVQQRGAAVIKARK 239

Query: 724 XXXXXXXXXXXXDHCRDWFHGTK--EWVSMAVYSDG-SYGVPKDVIFSFPVTIEHGKWHI 894
                       DH RD + GT   E+VSM V SDG SYGVP D+++S PV I++  W  
Sbjct: 240 LSSAMSAAKAIADHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSLPVVIKNKTWKF 299

Query: 895 VQGLTIDDFSRGKLELTGKELIEERDQALAFCS 993
           V+GL I+DFSR K++LT KEL EE++ A  F S
Sbjct: 300 VEGLPINDFSREKMDLTAKELTEEKETAFEFLS 332

>sp|P57106|MDHD_ARATH Malate dehydrogenase, cytoplasmic 2
          Length = 332

 Score =  334 bits (856), Expect = 3e-91
 Identities = 174/329 (52%), Positives = 221/329 (67%), Gaps = 2/329 (0%)
 Frame = +1

Query: 13  PITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDCAFP 192
           P+ V++TGAAGQIGY LV  +A G + G  QP+ LH+LDIP    +LNG+ MEL D AFP
Sbjct: 5   PVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVDAAFP 64

Query: 193 QLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYAKKT 372
            L  V AT D  EA   V+ A+MVG  PRKEGMERKD++  NV+I+K Q  AL+K+A   
Sbjct: 65  LLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPN 124

Query: 373 VRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRRCII 552
            +V VV NPANTN LI+ ++APSIP++N + LTRLDHNRA+ Q++ +  VP   V+  II
Sbjct: 125 CKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVKNVII 184

Query: 553 WGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXXXXX 732
           WGNHS+TQYPD +H  VK   G E  V + VK++ WL  +F+ TVQ RGAA+I       
Sbjct: 185 WGNHSSTQYPDVNHATVKTSVG-EKPVRELVKNDEWLNGEFISTVQQRGAAIIKARKLSS 243

Query: 733 XXXXXXXXXDHCRDWFHGTKE--WVSMAVYSDGSYGVPKDVIFSFPVTIEHGKWHIVQGL 906
                    DH RDW  GT E  +VSM VYSDGSY VP  +I+SFPVT  +G+W IVQGL
Sbjct: 244 ALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGL 303

Query: 907 TIDDFSRGKLELTGKELIEERDQALAFCS 993
            IDD SR K++LT +EL EE+D A +  S
Sbjct: 304 PIDDASRKKMDLTAEELKEEKDLAYSCLS 332

>sp|P93819|MDHC1_ARATH Malate dehydrogenase, cytoplasmic 1
          Length = 332

 Score =  332 bits (852), Expect = 9e-91
 Identities = 173/329 (52%), Positives = 219/329 (66%), Gaps = 2/329 (0%)
 Frame = +1

Query: 13  PITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDCAFP 192
           P+ V++TGAAGQIGY LV  +A G + G  QP+ LH+LDIP    +LNG+ MEL D AFP
Sbjct: 5   PVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELIDAAFP 64

Query: 193 QLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYAKKT 372
            L  V AT D  E    V+ A+MVG  PRKEGMERKD++  NV+I+K Q  AL+K+A   
Sbjct: 65  LLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKHAAPN 124

Query: 373 VRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRRCII 552
            +V VV NPANTN LI+ ++APSIP++N S LTRLDHNRA+ QI+ +  VP   V+  II
Sbjct: 125 CKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLSVPVSDVKNVII 184

Query: 553 WGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXXXXX 732
           WGNHS++QYPD +H  V+   G E  V + VKD+ WL  +F+ TVQ RGAA+I       
Sbjct: 185 WGNHSSSQYPDVNHAKVQTSSG-EKPVRELVKDDAWLDGEFISTVQQRGAAIIKARKLSS 243

Query: 733 XXXXXXXXXDHCRDWFHGTKE--WVSMAVYSDGSYGVPKDVIFSFPVTIEHGKWHIVQGL 906
                    DH RDW  GT E  +VSM VYSDGSY VP  +I+SFPVT  +G W IVQGL
Sbjct: 244 ALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSIVQGL 303

Query: 907 TIDDFSRGKLELTGKELIEERDQALAFCS 993
            ID+ SR K++LT +EL EE+D A +  S
Sbjct: 304 PIDEVSRKKMDLTAEELKEEKDLAYSCLS 332

>sp|O24047|MDHC_MESCR Malate dehydrogenase, cytoplasmic
          Length = 332

 Score =  332 bits (851), Expect = 1e-90
 Identities = 170/324 (52%), Positives = 216/324 (66%), Gaps = 2/324 (0%)
 Frame = +1

Query: 13  PITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDCAFP 192
           P+ V++TGAAGQIGY LV  +A G + G +QP+ LH+LDIP    +LNG+ MEL D AFP
Sbjct: 5   PLRVLVTGAAGQIGYALVPMIARGIMLGANQPVILHMLDIPPAAEALNGVKMELVDAAFP 64

Query: 193 QLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYAKKT 372
            L  V AT D  EA   V+ A+MVG  PRKEGMERKD++  NV+I+K Q  AL+++A   
Sbjct: 65  LLKGVVATTDAAEACKGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPN 124

Query: 373 VRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRRCII 552
            +V VV NPANTN LI+ ++APSIP++N S LTRLDHNRA+ QI+ +  V    V+  II
Sbjct: 125 CKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLNVQVSDVKNVII 184

Query: 553 WGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXXXXX 732
           WGNHS+TQYPD +H  VK   G +  V + V D+ WL  +F+ TVQ RGAA+I       
Sbjct: 185 WGNHSSTQYPDVNHATVK-TQGVDKPVRELVADDAWLNGEFITTVQQRGAAIIKARKLSS 243

Query: 733 XXXXXXXXXDHCRDWFHGTKE--WVSMAVYSDGSYGVPKDVIFSFPVTIEHGKWHIVQGL 906
                    DH  DW  GT E  WVSM VYSDGSY VP  +I+SFPVT ++G+W IVQGL
Sbjct: 244 ALSAASSACDHIHDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKNGEWTIVQGL 303

Query: 907 TIDDFSRGKLELTGKELIEERDQA 978
            IDD SR K++ T  EL+EE+  A
Sbjct: 304 PIDDDSRKKMDATAAELVEEKTLA 327

>sp|O48905|MDHC_MEDSA Malate dehydrogenase, cytoplasmic
          Length = 332

 Score =  330 bits (847), Expect = 3e-90
 Identities = 172/324 (53%), Positives = 216/324 (66%), Gaps = 2/324 (0%)
 Frame = +1

Query: 13  PITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDCAFP 192
           P+ V++TGAAGQIGY LV  +A G + G  QP+ LH+LDI     SLNG+ MEL D AFP
Sbjct: 5   PVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIAPAAESLNGVKMELVDAAFP 64

Query: 193 QLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYAKKT 372
            L  V AT D+ EA   V+ A+MVG  PRKEGMERKD++  NV+I+K Q  AL+K+A   
Sbjct: 65  LLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAAN 124

Query: 373 VRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRRCII 552
            +V VV NPANTN LI+ ++APSIP+ N S LTRLDHNRA+ QI+ +  V    V+  II
Sbjct: 125 CKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLNVQVSDVKNVII 184

Query: 553 WGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXXXXX 732
           WGNHS+TQYPD +H  V    G E  V   V D+ WL  +F+ TVQ RGAA+I       
Sbjct: 185 WGNHSSTQYPDVNHATVNTPAG-EKPVRQLVSDDAWLNGEFISTVQQRGAAIIKARKLSS 243

Query: 733 XXXXXXXXXDHCRDWFHGTKE--WVSMAVYSDGSYGVPKDVIFSFPVTIEHGKWHIVQGL 906
                    DH RDW  GT +  +VSM VYSDGSY VP  +I+SFPVT  +G+W IVQGL
Sbjct: 244 ALSAASAACDHIRDWVLGTPQGTFVSMGVYSDGSYNVPSGLIYSFPVTCANGEWKIVQGL 303

Query: 907 TIDDFSRGKLELTGKELIEERDQA 978
           +ID+FSR KL+LT +EL EE++ A
Sbjct: 304 SIDEFSRKKLDLTAEELTEEKNLA 327

>sp|Q9SML8|MDHC_BETVU Malate dehydrogenase, cytoplasmic
          Length = 332

 Score =  330 bits (845), Expect = 6e-90
 Identities = 171/327 (52%), Positives = 220/327 (67%), Gaps = 2/327 (0%)
 Frame = +1

Query: 13  PITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDCAFP 192
           P+ V++TGAAGQIGY LV  +A G + G +QP+ LH+LDIP    +LNG+ MEL D AFP
Sbjct: 5   PLRVLVTGAAGQIGYALVPMIARGVMLGANQPVILHMLDIPPAAEALNGVKMELVDAAFP 64

Query: 193 QLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYAKKT 372
            L  V AT D+ EA   V+ A+MVG  PRKEGMERKD++  NV+I+K Q  AL++YA   
Sbjct: 65  LLKGVVATTDVAEACKGVNVAVMVGGFPRKEGMERKDVMPKNVSIYKSQASALEQYAAPN 124

Query: 373 VRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRRCII 552
            +V VV NPANTN LI+ ++APSIP++N + LTRLDHNRA+ QI+ +       V+  II
Sbjct: 125 CKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLNAQVSDVKNVII 184

Query: 553 WGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXXXXX 732
           WGNHS++QYPD +   VK   G E +V + V D+ WL  +F+ TVQ RGAA+I       
Sbjct: 185 WGNHSSSQYPDVNPCTVKTGSG-EKAVRELVADDAWLNGEFITTVQQRGAAIIKARKLSS 243

Query: 733 XXXXXXXXXDHCRDWFHGTKE--WVSMAVYSDGSYGVPKDVIFSFPVTIEHGKWHIVQGL 906
                    DH RDW  GT E  WVSM VYSDGSY VP  +I+SFPVT + G+W IVQGL
Sbjct: 244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKDGEWKIVQGL 303

Query: 907 TIDDFSRGKLELTGKELIEERDQALAF 987
            ID+ SR K++ TG EL+EE+  ALA+
Sbjct: 304 PIDEVSRQKMDATGAELVEEK--ALAY 328

>sp|Q08062|MDHC_MAIZE Malate dehydrogenase, cytoplasmic
          Length = 332

 Score =  327 bits (839), Expect = 3e-89
 Identities = 170/324 (52%), Positives = 216/324 (66%), Gaps = 2/324 (0%)
 Frame = +1

Query: 13  PITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDCAFP 192
           P+ V++TGAAGQIGY LV  +A G + G  QP+ LH+LDIP    +LNG+ MEL D AFP
Sbjct: 5   PMRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVDAAFP 64

Query: 193 QLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYAKKT 372
            L  V AT D+ EA   V+ A+MVG  PRKEGMERKD++  NV+I+K Q  AL+ +A   
Sbjct: 65  LLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEAHAAPN 124

Query: 373 VRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRRCII 552
            +V VV NPANTN LI+ ++APSIP++N + LTRLDHNRA+ QI+ +  V    V+  II
Sbjct: 125 CKVLVVANPANTNALILKEFAPSIPEKNVTCLTRLDHNRALGQISERLNVQVSDVKNVII 184

Query: 553 WGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXXXXX 732
           WGNHS++QYPD +H  VK   G E  V + V D+ WL  +F+ TVQ RGAA+I       
Sbjct: 185 WGNHSSSQYPDVNHATVKTSTG-EKPVRELVSDDEWLNGEFITTVQQRGAAIIKARKFSS 243

Query: 733 XXXXXXXXXDHCRDWFHGTKE--WVSMAVYSDGSYGVPKDVIFSFPVTIEHGKWHIVQGL 906
                    DH RDW  GT E  +VSM VYSDGSYGVP  +I+SFPVT   G+W IVQGL
Sbjct: 244 ALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPSGLIYSFPVTCSGGEWKIVQGL 303

Query: 907 TIDDFSRGKLELTGKELIEERDQA 978
            ID+FSR K++ T +EL EE+  A
Sbjct: 304 PIDEFSRKKMDATAQELTEEKTLA 327

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,189,974
Number of Sequences: 369166
Number of extensions: 2605045
Number of successful extensions: 6858
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6713
length of database: 68,354,980
effective HSP length: 112
effective length of database: 47,664,660
effective search space used: 12535805580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00034

  1. Dr_sW_028_D09
  2. Dr_sW_015_M16
  3. Dr_sW_001_N21
  4. Dr_sW_003_K16
  5. Dr_sW_022_F13
  6. Dr_sW_020_F02
  7. Dr_sW_022_J04
  8. Dr_sW_017_K15
  9. Dr_sW_020_B08