Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_F13
(823 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q04820|MDHC_ECHGR Malate dehydrogenase, cytoplasmic 325 1e-88
sp|P11708|MDHC_PIG Malate dehydrogenase, cytoplasmic 313 3e-85
sp|P40925|MDHC_HUMAN Malate dehydrogenase, cytoplasmic 313 3e-85
sp|P14152|MDHC_MOUSE Malate dehydrogenase, cytoplasmic 313 4e-85
sp|O24047|MDHC_MESCR Malate dehydrogenase, cytoplasmic 273 3e-73
sp|P57106|MDHD_ARATH Malate dehydrogenase, cytoplasmic 2 273 5e-73
sp|P93819|MDHC1_ARATH Malate dehydrogenase, cytoplasmic 1 272 7e-73
sp|Q82WB9|MDH_NITEU Malate dehydrogenase 270 4e-72
sp|Q9SML8|MDHC_BETVU Malate dehydrogenase, cytoplasmic 270 5e-72
sp|O48905|MDHC_MEDSA Malate dehydrogenase, cytoplasmic 267 2e-71
>sp|Q04820|MDHC_ECHGR Malate dehydrogenase, cytoplasmic
Length = 332
Score = 325 bits (832), Expect = 1e-88
Identities = 168/276 (60%), Positives = 199/276 (72%), Gaps = 2/276 (0%)
Frame = +1
Query: 1 MTPPITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDC 180
M P+ V++TGAAGQI Y L + VA+GN+FG+ Q I LHLLDIP+ L+G++MEL+DC
Sbjct: 1 MPGPLRVLITGAAGQIAYNLSNMVANGNLFGKDQQIILHLLDIPEAKTVLDGVVMELQDC 60
Query: 181 AFPQLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYA 360
AF L + T L+EAF D+D ALMVGAMPRK+GMER+DLL +NV IFK QGEALDKYA
Sbjct: 61 AFTVLAGIVPTHCLKEAFTDIDVALMVGAMPRKQGMERRDLLSSNVKIFKEQGEALDKYA 120
Query: 361 KKTVRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRR 540
KKTV+V VVGNPANTNCLIMSKYAPSIPKENF+ALTRLDHNRAI Q+A KAGVP V+
Sbjct: 121 KKTVKVLVVGNPANTNCLIMSKYAPSIPKENFTALTRLDHNRAIYQVAAKAGVPNTCVKN 180
Query: 541 CIIWGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXX 720
IWGNHSN Q+PD H +V DGK+ + + DE W+K F+ VQ RGAAVI
Sbjct: 181 VCIWGNHSNKQFPDLSHAVVT-KDGKQHPAKELINDEKWVKEVFIPCVQNRGAAVIGLRK 239
Query: 721 XXXXXXXXXXXXDHCRDWFHGTK--EWVSMAVYSDG 822
D RDW+ GTK EWVSM+VYS G
Sbjct: 240 LSRAASAAKAIVDQMRDWWFGTKEGEWVSMSVYSTG 275
>sp|P11708|MDHC_PIG Malate dehydrogenase, cytoplasmic
Length = 334
Score = 313 bits (803), Expect = 3e-85
Identities = 167/276 (60%), Positives = 201/276 (72%), Gaps = 2/276 (0%)
Frame = +1
Query: 1 MTPPITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDC 180
M+ PI V++TGAAGQI Y L++S+ +G+VFG+ QPI L LLDI M+ L+G++MEL+DC
Sbjct: 1 MSEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC 60
Query: 181 AFPQLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYA 360
A P L V AT + AF D+D A++VG+MPR++GMERKDLLKANV IFK QG ALDKYA
Sbjct: 61 ALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA 120
Query: 361 KKTVRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRR 540
KK+V+V VVGNPANTNCL SK APSIPKENFS LTRLDHNRA AQIA K GV D V+
Sbjct: 121 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKN 180
Query: 541 CIIWGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXX 720
IIWGNHS+TQYPD +H VK KEV V +AVKD++WLK +F+ TVQ RGAAVI
Sbjct: 181 VIIWGNHSSTQYPDVNHAKVK-LQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARK 239
Query: 721 XXXXXXXXXXXXDHCRDWFHGTK--EWVSMAVYSDG 822
DH RD + GT E+VSM + SDG
Sbjct: 240 LSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDG 275
>sp|P40925|MDHC_HUMAN Malate dehydrogenase, cytoplasmic
Length = 334
Score = 313 bits (803), Expect = 3e-85
Identities = 168/276 (60%), Positives = 201/276 (72%), Gaps = 2/276 (0%)
Frame = +1
Query: 1 MTPPITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDC 180
M+ PI V++TGAAGQI Y L++S+ +G+VFG+ QPI L LLDI M+ L+G++MEL+DC
Sbjct: 1 MSEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC 60
Query: 181 AFPQLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYA 360
A P L V AT AF D+D A++VG+MPR+EGMERKDLLKANV IFK QG ALDKYA
Sbjct: 61 ALPLLKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYA 120
Query: 361 KKTVRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRR 540
KK+V+V VVGNPANTNCL SK APSIPKENFS LTRLDHNRA AQIA K GV + V+
Sbjct: 121 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKN 180
Query: 541 CIIWGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXX 720
IIWGNHS+TQYPD +H VK GKEV V +A+KD++WLK +F+ TVQ RGAAVI
Sbjct: 181 VIIWGNHSSTQYPDVNHAKVK-LQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARK 239
Query: 721 XXXXXXXXXXXXDHCRDWFHGTK--EWVSMAVYSDG 822
DH RD + GT E+VSM V SDG
Sbjct: 240 LSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDG 275
>sp|P14152|MDHC_MOUSE Malate dehydrogenase, cytoplasmic
Length = 334
Score = 313 bits (802), Expect = 4e-85
Identities = 167/276 (60%), Positives = 202/276 (73%), Gaps = 2/276 (0%)
Frame = +1
Query: 1 MTPPITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDC 180
M+ PI V++TGAAGQI Y L++S+ +G+VFG+ QPI L LLDI M+ L+G++MEL+DC
Sbjct: 1 MSEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC 60
Query: 181 AFPQLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYA 360
A P L V AT + AF D+D A++VG+MPR+EGMERKDLLKANV IFK QG AL+KYA
Sbjct: 61 ALPLLQDVIATDKEEIAFKDLDVAVLVGSMPRREGMERKDLLKANVKIFKSQGTALEKYA 120
Query: 361 KKTVRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRR 540
KK+V+V VVGNPANTNCL SK APSIPKENFS LTRLDHNRA +QIA K GV D V+
Sbjct: 121 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTADDVKN 180
Query: 541 CIIWGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXX 720
IIWGNHS+TQYPD +H VK GKEV V +A+KD++WLK +F+ TVQ RGAAVI
Sbjct: 181 VIIWGNHSSTQYPDVNHAKVK-LQGKEVGVYEALKDDSWLKGEFITTVQQRGAAVIKARK 239
Query: 721 XXXXXXXXXXXXDHCRDWFHGTK--EWVSMAVYSDG 822
DH RD + GT E+VSM V SDG
Sbjct: 240 LSSAMSAAKAIADHIRDIWFGTPEGEFVSMGVISDG 275
>sp|O24047|MDHC_MESCR Malate dehydrogenase, cytoplasmic
Length = 332
Score = 273 bits (699), Expect = 3e-73
Identities = 141/273 (51%), Positives = 178/273 (65%), Gaps = 2/273 (0%)
Frame = +1
Query: 10 PITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDCAFP 189
P+ V++TGAAGQIGY LV +A G + G +QP+ LH+LDIP +LNG+ MEL D AFP
Sbjct: 5 PLRVLVTGAAGQIGYALVPMIARGIMLGANQPVILHMLDIPPAAEALNGVKMELVDAAFP 64
Query: 190 QLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYAKKT 369
L V AT D EA V+ A+MVG PRKEGMERKD++ NV+I+K Q AL+++A
Sbjct: 65 LLKGVVATTDAAEACKGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPN 124
Query: 370 VRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRRCII 549
+V VV NPANTN LI+ ++APSIP++N S LTRLDHNRA+ QI+ + V V+ II
Sbjct: 125 CKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLNVQVSDVKNVII 184
Query: 550 WGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXXXXX 729
WGNHS+TQYPD +H VK G + V + V D+ WL +F+ TVQ RGAA+I
Sbjct: 185 WGNHSSTQYPDVNHATVK-TQGVDKPVRELVADDAWLNGEFITTVQQRGAAIIKARKLSS 243
Query: 730 XXXXXXXXXDHCRDWFHGTKE--WVSMAVYSDG 822
DH DW GT E WVSM VYSDG
Sbjct: 244 ALSAASSACDHIHDWVLGTPEGTWVSMGVYSDG 276
>sp|P57106|MDHD_ARATH Malate dehydrogenase, cytoplasmic 2
Length = 332
Score = 273 bits (697), Expect = 5e-73
Identities = 142/273 (52%), Positives = 180/273 (65%), Gaps = 2/273 (0%)
Frame = +1
Query: 10 PITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDCAFP 189
P+ V++TGAAGQIGY LV +A G + G QP+ LH+LDIP +LNG+ MEL D AFP
Sbjct: 5 PVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVDAAFP 64
Query: 190 QLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYAKKT 369
L V AT D EA V+ A+MVG PRKEGMERKD++ NV+I+K Q AL+K+A
Sbjct: 65 LLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPN 124
Query: 370 VRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRRCII 549
+V VV NPANTN LI+ ++APSIP++N + LTRLDHNRA+ Q++ + VP V+ II
Sbjct: 125 CKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVKNVII 184
Query: 550 WGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXXXXX 729
WGNHS+TQYPD +H VK G E V + VK++ WL +F+ TVQ RGAA+I
Sbjct: 185 WGNHSSTQYPDVNHATVKTSVG-EKPVRELVKNDEWLNGEFISTVQQRGAAIIKARKLSS 243
Query: 730 XXXXXXXXXDHCRDWFHGTKE--WVSMAVYSDG 822
DH RDW GT E +VSM VYSDG
Sbjct: 244 ALSAASSACDHIRDWVVGTPEGTFVSMGVYSDG 276
>sp|P93819|MDHC1_ARATH Malate dehydrogenase, cytoplasmic 1
Length = 332
Score = 272 bits (696), Expect = 7e-73
Identities = 142/273 (52%), Positives = 179/273 (65%), Gaps = 2/273 (0%)
Frame = +1
Query: 10 PITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDCAFP 189
P+ V++TGAAGQIGY LV +A G + G QP+ LH+LDIP +LNG+ MEL D AFP
Sbjct: 5 PVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELIDAAFP 64
Query: 190 QLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYAKKT 369
L V AT D E V+ A+MVG PRKEGMERKD++ NV+I+K Q AL+K+A
Sbjct: 65 LLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKHAAPN 124
Query: 370 VRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRRCII 549
+V VV NPANTN LI+ ++APSIP++N S LTRLDHNRA+ QI+ + VP V+ II
Sbjct: 125 CKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLSVPVSDVKNVII 184
Query: 550 WGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXXXXX 729
WGNHS++QYPD +H V+ G E V + VKD+ WL +F+ TVQ RGAA+I
Sbjct: 185 WGNHSSSQYPDVNHAKVQTSSG-EKPVRELVKDDAWLDGEFISTVQQRGAAIIKARKLSS 243
Query: 730 XXXXXXXXXDHCRDWFHGTKE--WVSMAVYSDG 822
DH RDW GT E +VSM VYSDG
Sbjct: 244 ALSAASSACDHIRDWVLGTPEGTFVSMGVYSDG 276
>sp|Q82WB9|MDH_NITEU Malate dehydrogenase
Length = 327
Score = 270 bits (690), Expect = 4e-72
Identities = 131/276 (47%), Positives = 178/276 (64%), Gaps = 2/276 (0%)
Frame = +1
Query: 1 MTPPITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDC 180
M+ PI + +TGAAGQI Y L+ +A+G++ G QP+ L LLDIP+ L+G++MEL+DC
Sbjct: 1 MSSPIRIAVTGAAGQISYSLLFRIAAGDMLGSSQPVILQLLDIPESGKVLDGVLMELQDC 60
Query: 181 AFPQLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYA 360
AFP L + T D AF D A++VGA PR +GMERKDLL+ N IF+ QG AL++
Sbjct: 61 AFPLLTDIIVTHDPMIAFDQADIAILVGARPRGKGMERKDLLQTNGEIFREQGRALNQVV 120
Query: 361 KKTVRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRR 540
K+ ++ VVGNPANTN LI K AP + ENFS + RLDHNRA++Q+A K P H+R+
Sbjct: 121 KRDAKILVVGNPANTNTLITMKNAPDLSPENFSGMLRLDHNRALSQVAMKLNQPVSHIRK 180
Query: 541 CIIWGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXX 720
I+WGNHS+TQ+PD H + V+D +KD+TW++N F+ TVQ RGA VI
Sbjct: 181 MIVWGNHSSTQFPDLSHAEI-----DHQKVIDLIKDQTWVENSFIPTVQNRGAVVIEARG 235
Query: 721 XXXXXXXXXXXXDHCRDWFHGTK--EWVSMAVYSDG 822
DH RDW GT+ +W++M + SDG
Sbjct: 236 LSSAASAANAIIDHMRDWIFGTRDDDWITMGILSDG 271
>sp|Q9SML8|MDHC_BETVU Malate dehydrogenase, cytoplasmic
Length = 332
Score = 270 bits (689), Expect = 5e-72
Identities = 140/273 (51%), Positives = 179/273 (65%), Gaps = 2/273 (0%)
Frame = +1
Query: 10 PITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDCAFP 189
P+ V++TGAAGQIGY LV +A G + G +QP+ LH+LDIP +LNG+ MEL D AFP
Sbjct: 5 PLRVLVTGAAGQIGYALVPMIARGVMLGANQPVILHMLDIPPAAEALNGVKMELVDAAFP 64
Query: 190 QLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYAKKT 369
L V AT D+ EA V+ A+MVG PRKEGMERKD++ NV+I+K Q AL++YA
Sbjct: 65 LLKGVVATTDVAEACKGVNVAVMVGGFPRKEGMERKDVMPKNVSIYKSQASALEQYAAPN 124
Query: 370 VRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRRCII 549
+V VV NPANTN LI+ ++APSIP++N + LTRLDHNRA+ QI+ + V+ II
Sbjct: 125 CKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLNAQVSDVKNVII 184
Query: 550 WGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXXXXX 729
WGNHS++QYPD + VK G E +V + V D+ WL +F+ TVQ RGAA+I
Sbjct: 185 WGNHSSSQYPDVNPCTVKTGSG-EKAVRELVADDAWLNGEFITTVQQRGAAIIKARKLSS 243
Query: 730 XXXXXXXXXDHCRDWFHGTKE--WVSMAVYSDG 822
DH RDW GT E WVSM VYSDG
Sbjct: 244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276
>sp|O48905|MDHC_MEDSA Malate dehydrogenase, cytoplasmic
Length = 332
Score = 267 bits (683), Expect = 2e-71
Identities = 141/273 (51%), Positives = 175/273 (64%), Gaps = 2/273 (0%)
Frame = +1
Query: 10 PITVVLTGAAGQIGYCLVHSVASGNVFGQHQPINLHLLDIPQMVPSLNGLIMELEDCAFP 189
P+ V++TGAAGQIGY LV +A G + G QP+ LH+LDI SLNG+ MEL D AFP
Sbjct: 5 PVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIAPAAESLNGVKMELVDAAFP 64
Query: 190 QLISVKATADLQEAFHDVDFALMVGAMPRKEGMERKDLLKANVNIFKVQGEALDKYAKKT 369
L V AT D+ EA V+ A+MVG PRKEGMERKD++ NV+I+K Q AL+K+A
Sbjct: 65 LLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAAN 124
Query: 370 VRVCVVGNPANTNCLIMSKYAPSIPKENFSALTRLDHNRAIAQIAGKAGVPCDHVRRCII 549
+V VV NPANTN LI+ ++APSIP+ N S LTRLDHNRA+ QI+ + V V+ II
Sbjct: 125 CKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLNVQVSDVKNVII 184
Query: 550 WGNHSNTQYPDFHHGLVKGHDGKEVSVLDAVKDETWLKNDFLKTVQTRGAAVIXXXXXXX 729
WGNHS+TQYPD +H V G E V V D+ WL +F+ TVQ RGAA+I
Sbjct: 185 WGNHSSTQYPDVNHATVNTPAG-EKPVRQLVSDDAWLNGEFISTVQQRGAAIIKARKLSS 243
Query: 730 XXXXXXXXXDHCRDWFHGTKE--WVSMAVYSDG 822
DH RDW GT + +VSM VYSDG
Sbjct: 244 ALSAASAACDHIRDWVLGTPQGTFVSMGVYSDG 276
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,343,856
Number of Sequences: 369166
Number of extensions: 1871423
Number of successful extensions: 5176
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5072
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7907893860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)