Planaria EST Database

DrC_00950

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00950
         (1378 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99JY9|ARP3_MOUSE  Actin-like protein 3 (Actin-related pr...   617   e-176
sp|P61157|ARP3_BOVIN  Actin-like protein 3 (Actin-related pr...   617   e-176
sp|O73723|ARP3_FUGRU  Actin-like protein 3 (Actin-related pr...   612   e-174
sp|P32392|ARP3_DROME  Actin-like protein 3 (Actin-related pr...   598   e-170
sp|Q9N4I0|ARP3_CAEEL  Actin-like protein 3 (Actin-related pr...   578   e-164
sp|Q61WW9|ARP3_CAEBR  Actin-like protein 3 (Actin-related pr...   573   e-163
sp|P53490|ARP3_ACACA  Actin-like protein 3 (Actin-related pr...   549   e-156
sp|P42528|ARP3_DICDI  Actin-like protein 3 (Actin-related pr...   549   e-156
sp|P78712|ARP3_NEUCR  Actin-like protein 3 (Actin-related pr...   456   e-128
sp|P32390|ARP3_SCHPO  Actin-like protein 3 (Actin-related pr...   446   e-125

>sp|Q99JY9|ARP3_MOUSE Actin-like protein 3 (Actin-related protein 3)
          Length = 418

 Score =  617 bits (1592), Expect = e-176
 Identities = 297/413 (71%), Positives = 343/413 (83%), Gaps = 1/413 (0%)
 Frame = +3

Query: 3    PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREG-KMGSKDSRRIGTGLDDLNFYIGDE 179
            PA V+D GTGY+KLG+A N EPQFIIPSCIA +E  K+G +  RR+  G+DDL+F+IGDE
Sbjct: 6    PACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDE 65

Query: 180  AQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPPLNTPEN 359
            A     K  ++ +WPIRHG+VEDWDL ERFMEQ IFK LRAEPEDHYFLLTEPPLNTPEN
Sbjct: 66   AIE---KPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPEN 122

Query: 360  REFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTHVIPVVD 539
            RE+TAEIMFE+FNVPGLYIAVQAVLALAASWTSR   ERTLTGTVIDSGDGVTHVIPV +
Sbjct: 123  REYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAE 182

Query: 540  GYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCPDIAKEF 719
            GYVIGS IKHIPIAGRDIT+FIQQLLR+RE  IPP+ S+E AK +KERYSYVCPD+ KEF
Sbjct: 183  GYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEF 242

Query: 720  AKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFFRPEFVNADFQTSISDVVDT 899
             KYD+D  KWIK +    +    +FS DVGYE+FLGPE+FF PEF N DF   IS+VVD 
Sbjct: 243  NKYDTDGSKWIKQYTGVNAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDE 302

Query: 900  VIQSCPIDSRRPLYNNIVLSGGSSMFKHLDRRIQRDIKKMVDFRLKLTEENSHGKLKPTP 1079
            VIQ+CPID RRPLY NIVLSGGS+MF+   RR+QRD+K+ VD RLKL+EE S G+LKP P
Sbjct: 303  VIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKP 362

Query: 1080 IDVKVVSHSMQRYAVWFGGALLASSDDFYTAAHTKKQYDEIGPSICRHNPVFG 1238
            IDV+V++H MQRYAVWFGG++LAS+ +FY   HTKK Y+EIGPSICRHNPVFG
Sbjct: 363  IDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFG 415

>sp|P61157|ARP3_BOVIN Actin-like protein 3 (Actin-related protein 3) (Actin-2)
 sp|P61158|ARP3_HUMAN Actin-like protein 3 (Actin-related protein 3)
 sp|Q5R8R1|ARP3_PONPY Actin-like protein 3 (Actin-related protein 3)
          Length = 418

 Score =  617 bits (1592), Expect = e-176
 Identities = 297/413 (71%), Positives = 343/413 (83%), Gaps = 1/413 (0%)
 Frame = +3

Query: 3    PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREG-KMGSKDSRRIGTGLDDLNFYIGDE 179
            PA V+D GTGY+KLG+A N EPQFIIPSCIA +E  K+G +  RR+  G+DDL+F+IGDE
Sbjct: 6    PACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDE 65

Query: 180  AQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPPLNTPEN 359
            A     K  ++ +WPIRHG+VEDWDL ERFMEQ IFK LRAEPEDHYFLLTEPPLNTPEN
Sbjct: 66   AIE---KPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPEN 122

Query: 360  REFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTHVIPVVD 539
            RE+TAEIMFE+FNVPGLYIAVQAVLALAASWTSR   ERTLTGTVIDSGDGVTHVIPV +
Sbjct: 123  REYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAE 182

Query: 540  GYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCPDIAKEF 719
            GYVIGS IKHIPIAGRDIT+FIQQLLR+RE  IPP+ S+E AK +KERYSYVCPD+ KEF
Sbjct: 183  GYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEF 242

Query: 720  AKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFFRPEFVNADFQTSISDVVDT 899
             KYD+D  KWIK +    +    +FS DVGYE+FLGPE+FF PEF N DF   IS+VVD 
Sbjct: 243  NKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDE 302

Query: 900  VIQSCPIDSRRPLYNNIVLSGGSSMFKHLDRRIQRDIKKMVDFRLKLTEENSHGKLKPTP 1079
            VIQ+CPID RRPLY NIVLSGGS+MF+   RR+QRD+K+ VD RLKL+EE S G+LKP P
Sbjct: 303  VIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKP 362

Query: 1080 IDVKVVSHSMQRYAVWFGGALLASSDDFYTAAHTKKQYDEIGPSICRHNPVFG 1238
            IDV+V++H MQRYAVWFGG++LAS+ +FY   HTKK Y+EIGPSICRHNPVFG
Sbjct: 363  IDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFG 415

>sp|O73723|ARP3_FUGRU Actin-like protein 3 (Actin-related protein 3)
          Length = 418

 Score =  612 bits (1577), Expect = e-174
 Identities = 294/413 (71%), Positives = 342/413 (82%), Gaps = 1/413 (0%)
 Frame = +3

Query: 3    PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREG-KMGSKDSRRIGTGLDDLNFYIGDE 179
            PA V+D GTGY+KLG+A N EPQFI+PSCIA +E  K+G +  RR+  G+DDL+F+IGDE
Sbjct: 6    PACVVDCGTGYTKLGYAGNTEPQFIMPSCIAIKESSKVGDQAQRRMMRGVDDLDFFIGDE 65

Query: 180  AQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPPLNTPEN 359
            A     K  ++ +WPIRHG+VEDWDL ERFMEQ IFK LRAEPEDHYFLLTEPPLNTPEN
Sbjct: 66   AI---DKPPYATKWPIRHGIVEDWDLMERFMEQIIFKYLRAEPEDHYFLLTEPPLNTPEN 122

Query: 360  REFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTHVIPVVD 539
            RE+TAEIMFE+FNVPGLYIAVQAVLALAASWTSR   ERTLTGTVIDSGDGVTHVIPV +
Sbjct: 123  REYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAE 182

Query: 540  GYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCPDIAKEF 719
            GYVIGS IKHIPIAGRDIT+F QQLLRERE  IPP+ S+E AK +KER+SYVCPD+ KEF
Sbjct: 183  GYVIGSCIKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVKEF 242

Query: 720  AKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFFRPEFVNADFQTSISDVVDT 899
             KYD+D  KWIK +    +    +F+ DVGYE+FLGPE+FF PEF N DF   IS+VVD 
Sbjct: 243  NKYDTDGSKWIKQYTGINAITKKEFTIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDE 302

Query: 900  VIQSCPIDSRRPLYNNIVLSGGSSMFKHLDRRIQRDIKKMVDFRLKLTEENSHGKLKPTP 1079
            VIQ+CPID RRPLY NIVLSGGS+MF+   RR+QRD+K+ VD RLK++EE S GKLKP P
Sbjct: 303  VIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKMSEELSGGKLKPKP 362

Query: 1080 IDVKVVSHSMQRYAVWFGGALLASSDDFYTAAHTKKQYDEIGPSICRHNPVFG 1238
            IDV+V++H MQRYAVWFGG++LAS+ +FY   HTKK Y+EIGPSICRHNPVFG
Sbjct: 363  IDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFG 415

>sp|P32392|ARP3_DROME Actin-like protein 3 (Actin-related protein 3) (Actin-like protein
            66B) (Actin-2)
          Length = 418

 Score =  598 bits (1541), Expect = e-170
 Identities = 286/413 (69%), Positives = 341/413 (82%), Gaps = 1/413 (0%)
 Frame = +3

Query: 3    PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREG-KMGSKDSRRIGTGLDDLNFYIGDE 179
            PA VID GTGYSKLGFA N+EPQFIIPS IA +E  ++G  ++RRI  G++DL+F+IGDE
Sbjct: 6    PACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDE 65

Query: 180  AQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPPLNTPEN 359
            A    G   +S+++P+RHG+VEDWDL ERF+EQ +FK LRAEPEDHYFLLTEPPLNTPEN
Sbjct: 66   AFDATG---YSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPEN 122

Query: 360  REFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTHVIPVVD 539
            RE+TAEIMFETFNVPGLYIAVQAVLALAASW SR A ERTLTG V+DSGDGVTHVIPV +
Sbjct: 123  REYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAE 182

Query: 540  GYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCPDIAKEF 719
            GYVIGS IKHIPIAGR+IT FIQ LLRERE  IPP+ S+E AK IKE++ Y+CPDIAKEF
Sbjct: 183  GYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEF 242

Query: 720  AKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFFRPEFVNADFQTSISDVVDT 899
            AKYD++P KWI++     +     F+ DVGYE+FLGPE+FF PEF N DF   +S++VD 
Sbjct: 243  AKYDTEPGKWIRNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDN 302

Query: 900  VIQSCPIDSRRPLYNNIVLSGGSSMFKHLDRRIQRDIKKMVDFRLKLTEENSHGKLKPTP 1079
            VIQ+CPID RRPLYNNIVLSGGS+MFK   RR+QRDIK+ VD RL+++E  S G++KP P
Sbjct: 303  VIQNCPIDVRRPLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKP 362

Query: 1080 IDVKVVSHSMQRYAVWFGGALLASSDDFYTAAHTKKQYDEIGPSICRHNPVFG 1238
            IDV+V++H MQRYAVWFGG++LAS+ +FY   HTK  Y+E GPSICRHNPVFG
Sbjct: 363  IDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKAAYEEYGPSICRHNPVFG 415

>sp|Q9N4I0|ARP3_CAEEL Actin-like protein 3 (Actin-related protein 3)
          Length = 425

 Score =  578 bits (1491), Expect = e-164
 Identities = 279/418 (66%), Positives = 337/418 (80%), Gaps = 6/418 (1%)
 Frame = +3

Query: 3    PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREGKMGSKDSR------RIGTGLDDLNF 164
            PA VIDNGTGY+KLG+A N EPQFIIPS IA ++ K+ S +S+      R+G G+DDL+F
Sbjct: 7    PACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKD-KVASSNSQAMRWNNRVGAGIDDLDF 65

Query: 165  YIGDEAQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPPL 344
            +IGDEA +    N ++V++PIRHG+VEDWDL ER+ EQ IFK LRAEPEDH+FLLTEPPL
Sbjct: 66   FIGDEALSPAATN-YTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPL 124

Query: 345  NTPENREFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTHV 524
            NTPENRE+TAEIMFE+FNVPGLYIAVQAVLAL ASW SR ANER+LTG VIDSGDGVTH 
Sbjct: 125  NTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHC 184

Query: 525  IPVVDGYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCPD 704
            IPV DGYVIGS IKHIPIAGRDIT+FIQ LLR+RE  IP + S E AK IKE++ YVCPD
Sbjct: 185  IPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPD 244

Query: 705  IAKEFAKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFFRPEFVNADFQTSIS 884
            + KEF KYD+D  KW++++    S     F+ DVGYE+FLGPE+FF PEF N +F T IS
Sbjct: 245  VMKEFVKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPEFTTPIS 304

Query: 885  DVVDTVIQSCPIDSRRPLYNNIVLSGGSSMFKHLDRRIQRDIKKMVDFRLKLTEENSHGK 1064
            D +DT+IQ CPID RR LY NIVLSGGS+MFK   R++QRD+K++ D RL+++E  S G+
Sbjct: 305  DTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGR 364

Query: 1065 LKPTPIDVKVVSHSMQRYAVWFGGALLASSDDFYTAAHTKKQYDEIGPSICRHNPVFG 1238
            LKP PIDV+V+SH MQRYAVWFGG++LAS+ +FY  +HTK +Y E GPSICR+NPVFG
Sbjct: 365  LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSICRYNPVFG 422

>sp|Q61WW9|ARP3_CAEBR Actin-like protein 3 (Actin-related protein 3)
          Length = 426

 Score =  573 bits (1478), Expect = e-163
 Identities = 277/419 (66%), Positives = 336/419 (80%), Gaps = 7/419 (1%)
 Frame = +3

Query: 3    PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREGKMGSKDSRRI-------GTGLDDLN 161
            PA VIDNGTGY+KLG+A N EPQFIIPS IA ++ K+ S +++ +       G G+DDL+
Sbjct: 7    PACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKD-KVASSNAQALRWNNRVGGAGIDDLD 65

Query: 162  FYIGDEAQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPP 341
            F+IGDEA +    N ++V++PIRHG+VEDWDL ER+ EQ IFK LRAEPEDH+FLLTEPP
Sbjct: 66   FFIGDEALSPAASN-YTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 124

Query: 342  LNTPENREFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTH 521
            LNTPENRE+TAEIMFE+FNVPGLYIAVQAVLAL ASW SR A++R+LTG VIDSGDGVTH
Sbjct: 125  LNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWQSREASDRSLTGLVIDSGDGVTH 184

Query: 522  VIPVVDGYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCP 701
             IPV DGYVIGS IKHIPIAGRDIT+FIQ LLRERE  IP + S E AK IKE++ YVCP
Sbjct: 185  CIPVADGYVIGSCIKHIPIAGRDITYFIQNLLREREHTIPAEQSYEVAKTIKEKFCYVCP 244

Query: 702  DIAKEFAKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFFRPEFVNADFQTSI 881
            D+ KEF KYD+D  KW++++    S     FS DVGYE+FLGPE+FF PEF N DF T I
Sbjct: 245  DVMKEFVKYDTDSSKWLRTYDGINSITKRPFSVDVGYERFLGPEIFFHPEFCNPDFTTPI 304

Query: 882  SDVVDTVIQSCPIDSRRPLYNNIVLSGGSSMFKHLDRRIQRDIKKMVDFRLKLTEENSHG 1061
            SD +DT+IQ CPID RR LY NIVLSGGS+MFK   R++QRD+K++ D RL+++E  S G
Sbjct: 305  SDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDARLQMSETLSGG 364

Query: 1062 KLKPTPIDVKVVSHSMQRYAVWFGGALLASSDDFYTAAHTKKQYDEIGPSICRHNPVFG 1238
            +LKP PIDV+V+SH MQRYAVWFGG++LAS+ +FY  +H+K +Y E GPSICR+NPVFG
Sbjct: 365  RLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHSKAEYMEKGPSICRYNPVFG 423

>sp|P53490|ARP3_ACACA Actin-like protein 3 (Actin-related protein 3)
          Length = 427

 Score =  549 bits (1415), Expect = e-156
 Identities = 266/419 (63%), Positives = 325/419 (77%), Gaps = 7/419 (1%)
 Frame = +3

Query: 3    PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREGKMGSKDSRR-------IGTGLDDLN 161
            PAVVIDNGTGY+K+G+A N EPQ+IIP+ IAT+      +   R        G  + DL+
Sbjct: 7    PAVVIDNGTGYTKMGYAGNTEPQYIIPTAIATKGIAEDPRCRARRWWCPWAAGKNIADLD 66

Query: 162  FYIGDEAQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPP 341
            F+IGDEA   E    + +  P+RHG VE+W   E+F E  IFK LR EPEDH+FLLTEPP
Sbjct: 67   FFIGDEAY--ENSKVYQITMPVRHGQVENWTHMEQFWEHCIFKYLRCEPEDHHFLLTEPP 124

Query: 342  LNTPENREFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTH 521
            LN PENRE+TAEIMFETFNVPGLYIAVQAVLALAASWTS+   E+TLTGTVIDSGDGVTH
Sbjct: 125  LNAPENREYTAEIMFETFNVPGLYIAVQAVLALAASWTSKQVTEKTLTGTVIDSGDGVTH 184

Query: 522  VIPVVDGYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCP 701
            VIPV +GYVIGS+IKHIP+AGRDIT F+ QLLRER   IPP  ++E AK+IKE +SYVCP
Sbjct: 185  VIPVAEGYVIGSSIKHIPLAGRDITNFVLQLLRERNEKIPPAETLEVAKRIKETFSYVCP 244

Query: 702  DIAKEFAKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFFRPEFVNADFQTSI 881
            DI KEF KYD++P+KW K+++   S     ++ DVGYE+FLGPE+FF PE  ++DF T +
Sbjct: 245  DIVKEFKKYDTEPDKWFKTYEGIESVGKKPYNVDVGYERFLGPEIFFNPEIFSSDFLTPL 304

Query: 882  SDVVDTVIQSCPIDSRRPLYNNIVLSGGSSMFKHLDRRIQRDIKKMVDFRLKLTEENSHG 1061
              VVD  IQSCPID+RR LY NIVLSGGS+MFK   +R+QRDIK+ VD+R+K +EE S G
Sbjct: 305  PKVVDETIQSCPIDTRRGLYKNIVLSGGSTMFKDFGKRLQRDIKRAVDYRIKRSEELSQG 364

Query: 1062 KLKPTPIDVKVVSHSMQRYAVWFGGALLASSDDFYTAAHTKKQYDEIGPSICRHNPVFG 1238
            ++K   +DVKV+SH MQR+AVWFGG++LAS+ +FY   HTK+QYDE+GPSICRHNPVFG
Sbjct: 365  RIKSKAVDVKVISHHMQRFAVWFGGSMLASTPEFYKVCHTKQQYDEVGPSICRHNPVFG 423

>sp|P42528|ARP3_DICDI Actin-like protein 3 (Actin-related protein 3)
          Length = 418

 Score =  549 bits (1415), Expect = e-156
 Identities = 265/412 (64%), Positives = 326/412 (79%)
 Frame = +3

Query: 3    PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREGKMGSKDSRRIGTGLDDLNFYIGDEA 182
            PAVVIDNGTGY+K+G+A N +P FIIP+ IAT+  K G + +     G++DL+F+IGDEA
Sbjct: 8    PAVVIDNGTGYTKMGYAGNNDPSFIIPTTIATQSSK-GKQTAASQKKGVEDLDFFIGDEA 66

Query: 183  QAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPPLNTPENR 362
             A      + +  P++HG +E+W   E++ E  +FK LR EPEDHYFLLTEPPLN PENR
Sbjct: 67   IA--NSKTYDMTNPVKHGQIENWTHMEQYWEHCVFKYLRCEPEDHYFLLTEPPLNAPENR 124

Query: 363  EFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTHVIPVVDG 542
            EFTAEIMFETFNVPGLYIAVQAVLALAASWTS+ A E+TLTGTVIDSGDGVTHVIP+ +G
Sbjct: 125  EFTAEIMFETFNVPGLYIAVQAVLALAASWTSKNA-EKTLTGTVIDSGDGVTHVIPISEG 183

Query: 543  YVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCPDIAKEFA 722
            YVIGS+IKHIPIAGRDI+ ++QQ++RERE  IPP  S+E AK++KE+YSYVCPDI KEF 
Sbjct: 184  YVIGSSIKHIPIAGRDISSYVQQIMREREPNIPPAESLEIAKRVKEQYSYVCPDIVKEFG 243

Query: 723  KYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFFRPEFVNADFQTSISDVVDTV 902
            KYDS+P+KWIK+     S     FS+DVGYE+FLGPE+FF PE  ++D+ T +  VVD  
Sbjct: 244  KYDSEPDKWIKTINAQDSVTKKPFSYDVGYERFLGPELFFNPEIASSDYLTPLPKVVDDT 303

Query: 903  IQSCPIDSRRPLYNNIVLSGGSSMFKHLDRRIQRDIKKMVDFRLKLTEENSHGKLKPTPI 1082
            IQSCPID RR LY NIVLSGGS+MFK   +R+QRD+K+ VD+R+K +EE S GK+K  P+
Sbjct: 304  IQSCPIDCRRGLYKNIVLSGGSTMFKDFGKRLQRDVKRSVDYRIKRSEELSGGKIKAVPL 363

Query: 1083 DVKVVSHSMQRYAVWFGGALLASSDDFYTAAHTKKQYDEIGPSICRHNPVFG 1238
             V V+SH+MQRYAVWFGG++LAS+ +FY   HTK QYDEIGPSICR N V G
Sbjct: 364  AVNVISHNMQRYAVWFGGSMLASTPEFYNVCHTKAQYDEIGPSICRFNTVIG 415

>sp|P78712|ARP3_NEUCR Actin-like protein 3 (Actin-related protein 3)
          Length = 439

 Score =  456 bits (1174), Expect = e-128
 Identities = 238/435 (54%), Positives = 297/435 (68%), Gaps = 23/435 (5%)
 Frame = +3

Query: 3    PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREGKMGS------------KDSRRIG-- 140
            PAVV+DNGTG+SKLGFA N  P F+ P+ IAT+    G+            K S   G  
Sbjct: 6    PAVVMDNGTGFSKLGFAGNDSPSFVFPTAIATKSPSAGTGGSGSGRPAVANKPSFLTGGA 65

Query: 141  ---------TGLDDLNFYIGDEAQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKM 293
                      G +DL+++IGDEA A      + + +PIRHG +E+WD  ERF   +IFK 
Sbjct: 66   GPGGHLSAKRGTEDLDYFIGDEAVAAANGPGYGLHYPIRHGQIENWDHMERFWSNSIFKY 125

Query: 294  LRAEPEDHYFLLTEPPLNTPENREFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANE 473
            LR EPEDH+FLLTEPPLN PENRE TAEI FE+FN  GLYIAVQAVLALAASWTS    +
Sbjct: 126  LRVEPEDHHFLLTEPPLNPPENRENTAEIFFESFNCAGLYIAVQAVLALAASWTSSKVQD 185

Query: 474  RTLTGTVIDSGDGVTHVIPVVDGYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMS 653
            R+LTGTVIDSGDGVTHVIPV +GYVIGS+IK IPIAGRDIT+F+Q LLR+R     PD S
Sbjct: 186  RSLTGTVIDSGDGVTHVIPVAEGYVIGSSIKSIPIAGRDITYFVQSLLRDRG---EPDSS 242

Query: 654  MEAAKQIKERYSYVCPDIAKEFAKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPE 833
            ++ A++IKE Y YVCPDI KEFAKYD D  +++K        +    + DVGYE+F+ PE
Sbjct: 243  LKTAQEIKEEYCYVCPDIVKEFAKYDRDRSRFLKHTITQPGGR--QVTVDVGYERFMAPE 300

Query: 834  VFFRPEFVNADFQTSISDVVDTVIQSCPIDSRRPLYNNIVLSGGSSMFKHLDRRIQRDIK 1013
            +FF PE  ++DF T +  VVD VIQS PID RR LY NIVLSGGS+++K   RR+QRDIK
Sbjct: 301  IFFNPEIYSSDFLTPLPVVVDGVIQSSPIDVRRGLYKNIVLSGGSTLYKDFGRRLQRDIK 360

Query: 1014 KMVDFRLKLTEENSHGKLKPTPIDVKVVSHSMQRYAVWFGGALLASSDDFYTAAHTKKQY 1193
            ++VD R+K +E  S G  K   +DV+V++H  QR+  WFGG+LL  + +F +  HTK +Y
Sbjct: 361  QLVDTRIKASEVRS-GGAKSGGLDVQVITHKRQRHGPWFGGSLLGQTPEFRSYCHTKAEY 419

Query: 1194 DEIGPSICRHNPVFG 1238
             E GPSI R   + G
Sbjct: 420  QEYGPSIVRRFALLG 434

>sp|P32390|ARP3_SCHPO Actin-like protein 3 (Actin-related protein 3)
          Length = 427

 Score =  446 bits (1148), Expect = e-125
 Identities = 225/427 (52%), Positives = 304/427 (71%), Gaps = 17/427 (3%)
 Frame = +3

Query: 9    VVIDNGTGYSKLGFADNQEPQFIIPSCIATREGK-------------MGSKDSRRIGT-- 143
            +++DNGTGYSKLG+A N  P ++ P+ IATR                M SK S  + +  
Sbjct: 8    IIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKR 67

Query: 144  GLDDLNFYIGDEAQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYF 323
              +DL+F+IG++A   +    +S+ +PIRHG +E+WD  ERF +Q++FK LR EPEDHYF
Sbjct: 68   ATEDLDFFIGNDA-LKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126

Query: 324  LLTEPPLNTPENREFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDS 503
            LLTEPPLN PENRE TAEIMFE+FN  GLYIAVQAVLALAASWTS    +R+LTGTV+DS
Sbjct: 127  LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDS 186

Query: 504  GDGVTHVIPVVDGYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKER 683
            GDGVTH+IPV +GYVIGS+IK +P+AGRD+T+F+Q LLR+R     PD S++ A++IKE 
Sbjct: 187  GDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRN---EPDSSLKTAERIKEE 243

Query: 684  YSYVCPDIAKEFAKYDSDPEKWIK--SHKMSGSAKYPDFSFDVGYEKFLGPEVFFRPEFV 857
              YVCPDI KEF+++D +P++++K  S  ++G +     + DVG+E+FL PE+FF PE  
Sbjct: 244  CCYVCPDIVKEFSRFDREPDRYLKYASESITGHST----TIDVGFERFLAPEIFFNPEIA 299

Query: 858  NADFQTSISDVVDTVIQSCPIDSRRPLYNNIVLSGGSSMFKHLDRRIQRDIKKMVDFRLK 1037
            ++DF T + ++VD V+QS PID R+ LY NIVLSGGS++FK+   R+QRD+K++VD R+ 
Sbjct: 300  SSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIH 359

Query: 1038 LTEENSHGKLKPTPIDVKVVSHSMQRYAVWFGGALLASSDDFYTAAHTKKQYDEIGPSIC 1217
             +E  S    K   +DV V+SH  QR AVWFGG+LLA + +F +  HTK  Y+E G SI 
Sbjct: 360  RSEMLSGA--KSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIA 417

Query: 1218 RHNPVFG 1238
            R   +FG
Sbjct: 418  RRYQIFG 424

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,518,362
Number of Sequences: 369166
Number of extensions: 3642473
Number of successful extensions: 11777
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10126
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 16269545360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00950

  1. Dr_sW_024_B22
  2. Dr_sW_027_D05
  3. Dr_sW_025_D19
  4. Dr_sW_002_P07
  5. Dr_sW_002_B15
  6. Dr_sW_020_A22
  7. Dr_sW_008_O15
  8. Dr_sW_025_K24
  9. Dr_sW_010_G11