Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_D05
(844 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q99JY9|ARP3_MOUSE Actin-like protein 3 (Actin-related pr... 423 e-118
sp|P61157|ARP3_BOVIN Actin-like protein 3 (Actin-related pr... 423 e-118
sp|O73723|ARP3_FUGRU Actin-like protein 3 (Actin-related pr... 417 e-116
sp|P32392|ARP3_DROME Actin-like protein 3 (Actin-related pr... 409 e-114
sp|Q9N4I0|ARP3_CAEEL Actin-like protein 3 (Actin-related pr... 399 e-111
sp|Q61WW9|ARP3_CAEBR Actin-like protein 3 (Actin-related pr... 394 e-109
sp|P42528|ARP3_DICDI Actin-like protein 3 (Actin-related pr... 378 e-104
sp|P53490|ARP3_ACACA Actin-like protein 3 (Actin-related pr... 368 e-101
sp|P78712|ARP3_NEUCR Actin-like protein 3 (Actin-related pr... 329 7e-90
sp|P32390|ARP3_SCHPO Actin-like protein 3 (Actin-related pr... 320 2e-87
>sp|Q99JY9|ARP3_MOUSE Actin-like protein 3 (Actin-related protein 3)
Length = 418
Score = 423 bits (1088), Expect = e-118
Identities = 205/281 (72%), Positives = 234/281 (83%), Gaps = 1/281 (0%)
Frame = +3
Query: 3 PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREG-KMGSKDSRRIGTGLDDLNFYIGDE 179
PA V+D GTGY+KLG+A N EPQFIIPSCIA +E K+G + RR+ G+DDL+F+IGDE
Sbjct: 6 PACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDE 65
Query: 180 AQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPPLNTPEN 359
A K ++ +WPIRHG+VEDWDL ERFMEQ IFK LRAEPEDHYFLLTEPPLNTPEN
Sbjct: 66 AIE---KPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPEN 122
Query: 360 REFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTHVIPVVD 539
RE+TAEIMFE+FNVPGLYIAVQAVLALAASWTSR ERTLTGTVIDSGDGVTHVIPV +
Sbjct: 123 REYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAE 182
Query: 540 GYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCPDIAKEF 719
GYVIGS IKHIPIAGRDIT+FIQQLLR+RE IPP+ S+E AK +KERYSYVCPD+ KEF
Sbjct: 183 GYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEF 242
Query: 720 AKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFF 842
KYD+D KWIK + + +FS DVGYE+FLGPE+FF
Sbjct: 243 NKYDTDGSKWIKQYTGVNAISKKEFSIDVGYERFLGPEIFF 283
>sp|P61157|ARP3_BOVIN Actin-like protein 3 (Actin-related protein 3) (Actin-2)
sp|P61158|ARP3_HUMAN Actin-like protein 3 (Actin-related protein 3)
sp|Q5R8R1|ARP3_PONPY Actin-like protein 3 (Actin-related protein 3)
Length = 418
Score = 423 bits (1088), Expect = e-118
Identities = 205/281 (72%), Positives = 234/281 (83%), Gaps = 1/281 (0%)
Frame = +3
Query: 3 PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREG-KMGSKDSRRIGTGLDDLNFYIGDE 179
PA V+D GTGY+KLG+A N EPQFIIPSCIA +E K+G + RR+ G+DDL+F+IGDE
Sbjct: 6 PACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDE 65
Query: 180 AQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPPLNTPEN 359
A K ++ +WPIRHG+VEDWDL ERFMEQ IFK LRAEPEDHYFLLTEPPLNTPEN
Sbjct: 66 AIE---KPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPEN 122
Query: 360 REFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTHVIPVVD 539
RE+TAEIMFE+FNVPGLYIAVQAVLALAASWTSR ERTLTGTVIDSGDGVTHVIPV +
Sbjct: 123 REYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAE 182
Query: 540 GYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCPDIAKEF 719
GYVIGS IKHIPIAGRDIT+FIQQLLR+RE IPP+ S+E AK +KERYSYVCPD+ KEF
Sbjct: 183 GYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEF 242
Query: 720 AKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFF 842
KYD+D KWIK + + +FS DVGYE+FLGPE+FF
Sbjct: 243 NKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFF 283
>sp|O73723|ARP3_FUGRU Actin-like protein 3 (Actin-related protein 3)
Length = 418
Score = 417 bits (1072), Expect = e-116
Identities = 202/281 (71%), Positives = 233/281 (82%), Gaps = 1/281 (0%)
Frame = +3
Query: 3 PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREG-KMGSKDSRRIGTGLDDLNFYIGDE 179
PA V+D GTGY+KLG+A N EPQFI+PSCIA +E K+G + RR+ G+DDL+F+IGDE
Sbjct: 6 PACVVDCGTGYTKLGYAGNTEPQFIMPSCIAIKESSKVGDQAQRRMMRGVDDLDFFIGDE 65
Query: 180 AQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPPLNTPEN 359
A K ++ +WPIRHG+VEDWDL ERFMEQ IFK LRAEPEDHYFLLTEPPLNTPEN
Sbjct: 66 AI---DKPPYATKWPIRHGIVEDWDLMERFMEQIIFKYLRAEPEDHYFLLTEPPLNTPEN 122
Query: 360 REFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTHVIPVVD 539
RE+TAEIMFE+FNVPGLYIAVQAVLALAASWTSR ERTLTGTVIDSGDGVTHVIPV +
Sbjct: 123 REYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAE 182
Query: 540 GYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCPDIAKEF 719
GYVIGS IKHIPIAGRDIT+F QQLLRERE IPP+ S+E AK +KER+SYVCPD+ KEF
Sbjct: 183 GYVIGSCIKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVKEF 242
Query: 720 AKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFF 842
KYD+D KWIK + + +F+ DVGYE+FLGPE+FF
Sbjct: 243 NKYDTDGSKWIKQYTGINAITKKEFTIDVGYERFLGPEIFF 283
>sp|P32392|ARP3_DROME Actin-like protein 3 (Actin-related protein 3) (Actin-like protein
66B) (Actin-2)
Length = 418
Score = 409 bits (1052), Expect = e-114
Identities = 199/281 (70%), Positives = 234/281 (83%), Gaps = 1/281 (0%)
Frame = +3
Query: 3 PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREG-KMGSKDSRRIGTGLDDLNFYIGDE 179
PA VID GTGYSKLGFA N+EPQFIIPS IA +E ++G ++RRI G++DL+F+IGDE
Sbjct: 6 PACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDE 65
Query: 180 AQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPPLNTPEN 359
A G +S+++P+RHG+VEDWDL ERF+EQ +FK LRAEPEDHYFLLTEPPLNTPEN
Sbjct: 66 AFDATG---YSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPEN 122
Query: 360 REFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTHVIPVVD 539
RE+TAEIMFETFNVPGLYIAVQAVLALAASW SR A ERTLTG V+DSGDGVTHVIPV +
Sbjct: 123 REYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAE 182
Query: 540 GYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCPDIAKEF 719
GYVIGS IKHIPIAGR+IT FIQ LLRERE IPP+ S+E AK IKE++ Y+CPDIAKEF
Sbjct: 183 GYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEF 242
Query: 720 AKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFF 842
AKYD++P KWI++ + F+ DVGYE+FLGPE+FF
Sbjct: 243 AKYDTEPGKWIRNFSGVNTVTKAPFNVDVGYERFLGPEIFF 283
>sp|Q9N4I0|ARP3_CAEEL Actin-like protein 3 (Actin-related protein 3)
Length = 425
Score = 399 bits (1026), Expect = e-111
Identities = 195/286 (68%), Positives = 231/286 (80%), Gaps = 6/286 (2%)
Frame = +3
Query: 3 PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREGKMGSKDSR------RIGTGLDDLNF 164
PA VIDNGTGY+KLG+A N EPQFIIPS IA ++ K+ S +S+ R+G G+DDL+F
Sbjct: 7 PACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKD-KVASSNSQAMRWNNRVGAGIDDLDF 65
Query: 165 YIGDEAQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPPL 344
+IGDEA + N ++V++PIRHG+VEDWDL ER+ EQ IFK LRAEPEDH+FLLTEPPL
Sbjct: 66 FIGDEALSPAATN-YTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPL 124
Query: 345 NTPENREFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTHV 524
NTPENRE+TAEIMFE+FNVPGLYIAVQAVLAL ASW SR ANER+LTG VIDSGDGVTH
Sbjct: 125 NTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHC 184
Query: 525 IPVVDGYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCPD 704
IPV DGYVIGS IKHIPIAGRDIT+FIQ LLR+RE IP + S E AK IKE++ YVCPD
Sbjct: 185 IPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPD 244
Query: 705 IAKEFAKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFF 842
+ KEF KYD+D KW++++ S F+ DVGYE+FLGPE+FF
Sbjct: 245 VMKEFVKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFF 290
>sp|Q61WW9|ARP3_CAEBR Actin-like protein 3 (Actin-related protein 3)
Length = 426
Score = 394 bits (1012), Expect = e-109
Identities = 193/287 (67%), Positives = 230/287 (80%), Gaps = 7/287 (2%)
Frame = +3
Query: 3 PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREGKMGSKDSRRI-------GTGLDDLN 161
PA VIDNGTGY+KLG+A N EPQFIIPS IA ++ K+ S +++ + G G+DDL+
Sbjct: 7 PACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKD-KVASSNAQALRWNNRVGGAGIDDLD 65
Query: 162 FYIGDEAQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPP 341
F+IGDEA + N ++V++PIRHG+VEDWDL ER+ EQ IFK LRAEPEDH+FLLTEPP
Sbjct: 66 FFIGDEALSPAASN-YTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 124
Query: 342 LNTPENREFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTH 521
LNTPENRE+TAEIMFE+FNVPGLYIAVQAVLAL ASW SR A++R+LTG VIDSGDGVTH
Sbjct: 125 LNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWQSREASDRSLTGLVIDSGDGVTH 184
Query: 522 VIPVVDGYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCP 701
IPV DGYVIGS IKHIPIAGRDIT+FIQ LLRERE IP + S E AK IKE++ YVCP
Sbjct: 185 CIPVADGYVIGSCIKHIPIAGRDITYFIQNLLREREHTIPAEQSYEVAKTIKEKFCYVCP 244
Query: 702 DIAKEFAKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFF 842
D+ KEF KYD+D KW++++ S FS DVGYE+FLGPE+FF
Sbjct: 245 DVMKEFVKYDTDSSKWLRTYDGINSITKRPFSVDVGYERFLGPEIFF 291
>sp|P42528|ARP3_DICDI Actin-like protein 3 (Actin-related protein 3)
Length = 418
Score = 378 bits (970), Expect = e-104
Identities = 184/280 (65%), Positives = 225/280 (80%)
Frame = +3
Query: 3 PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREGKMGSKDSRRIGTGLDDLNFYIGDEA 182
PAVVIDNGTGY+K+G+A N +P FIIP+ IAT+ K G + + G++DL+F+IGDEA
Sbjct: 8 PAVVIDNGTGYTKMGYAGNNDPSFIIPTTIATQSSK-GKQTAASQKKGVEDLDFFIGDEA 66
Query: 183 QAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPPLNTPENR 362
A + + P++HG +E+W E++ E +FK LR EPEDHYFLLTEPPLN PENR
Sbjct: 67 IA--NSKTYDMTNPVKHGQIENWTHMEQYWEHCVFKYLRCEPEDHYFLLTEPPLNAPENR 124
Query: 363 EFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTHVIPVVDG 542
EFTAEIMFETFNVPGLYIAVQAVLALAASWTS+ A E+TLTGTVIDSGDGVTHVIP+ +G
Sbjct: 125 EFTAEIMFETFNVPGLYIAVQAVLALAASWTSKNA-EKTLTGTVIDSGDGVTHVIPISEG 183
Query: 543 YVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCPDIAKEFA 722
YVIGS+IKHIPIAGRDI+ ++QQ++RERE IPP S+E AK++KE+YSYVCPDI KEF
Sbjct: 184 YVIGSSIKHIPIAGRDISSYVQQIMREREPNIPPAESLEIAKRVKEQYSYVCPDIVKEFG 243
Query: 723 KYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFF 842
KYDS+P+KWIK+ S FS+DVGYE+FLGPE+FF
Sbjct: 244 KYDSEPDKWIKTINAQDSVTKKPFSYDVGYERFLGPELFF 283
>sp|P53490|ARP3_ACACA Actin-like protein 3 (Actin-related protein 3)
Length = 427
Score = 368 bits (944), Expect = e-101
Identities = 182/287 (63%), Positives = 219/287 (76%), Gaps = 7/287 (2%)
Frame = +3
Query: 3 PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREGKMGSKDSRR-------IGTGLDDLN 161
PAVVIDNGTGY+K+G+A N EPQ+IIP+ IAT+ + R G + DL+
Sbjct: 7 PAVVIDNGTGYTKMGYAGNTEPQYIIPTAIATKGIAEDPRCRARRWWCPWAAGKNIADLD 66
Query: 162 FYIGDEAQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYFLLTEPP 341
F+IGDEA E + + P+RHG VE+W E+F E IFK LR EPEDH+FLLTEPP
Sbjct: 67 FFIGDEAY--ENSKVYQITMPVRHGQVENWTHMEQFWEHCIFKYLRCEPEDHHFLLTEPP 124
Query: 342 LNTPENREFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDSGDGVTH 521
LN PENRE+TAEIMFETFNVPGLYIAVQAVLALAASWTS+ E+TLTGTVIDSGDGVTH
Sbjct: 125 LNAPENREYTAEIMFETFNVPGLYIAVQAVLALAASWTSKQVTEKTLTGTVIDSGDGVTH 184
Query: 522 VIPVVDGYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKERYSYVCP 701
VIPV +GYVIGS+IKHIP+AGRDIT F+ QLLRER IPP ++E AK+IKE +SYVCP
Sbjct: 185 VIPVAEGYVIGSSIKHIPLAGRDITNFVLQLLRERNEKIPPAETLEVAKRIKETFSYVCP 244
Query: 702 DIAKEFAKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPEVFF 842
DI KEF KYD++P+KW K+++ S ++ DVGYE+FLGPE+FF
Sbjct: 245 DIVKEFKKYDTEPDKWFKTYEGIESVGKKPYNVDVGYERFLGPEIFF 291
>sp|P78712|ARP3_NEUCR Actin-like protein 3 (Actin-related protein 3)
Length = 439
Score = 329 bits (843), Expect = 7e-90
Identities = 171/303 (56%), Positives = 208/303 (68%), Gaps = 23/303 (7%)
Frame = +3
Query: 3 PAVVIDNGTGYSKLGFADNQEPQFIIPSCIATREGKMGS------------KDSRRIG-- 140
PAVV+DNGTG+SKLGFA N P F+ P+ IAT+ G+ K S G
Sbjct: 6 PAVVMDNGTGFSKLGFAGNDSPSFVFPTAIATKSPSAGTGGSGSGRPAVANKPSFLTGGA 65
Query: 141 ---------TGLDDLNFYIGDEAQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKM 293
G +DL+++IGDEA A + + +PIRHG +E+WD ERF +IFK
Sbjct: 66 GPGGHLSAKRGTEDLDYFIGDEAVAAANGPGYGLHYPIRHGQIENWDHMERFWSNSIFKY 125
Query: 294 LRAEPEDHYFLLTEPPLNTPENREFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANE 473
LR EPEDH+FLLTEPPLN PENRE TAEI FE+FN GLYIAVQAVLALAASWTS +
Sbjct: 126 LRVEPEDHHFLLTEPPLNPPENRENTAEIFFESFNCAGLYIAVQAVLALAASWTSSKVQD 185
Query: 474 RTLTGTVIDSGDGVTHVIPVVDGYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMS 653
R+LTGTVIDSGDGVTHVIPV +GYVIGS+IK IPIAGRDIT+F+Q LLR+R PD S
Sbjct: 186 RSLTGTVIDSGDGVTHVIPVAEGYVIGSSIKSIPIAGRDITYFVQSLLRDRG---EPDSS 242
Query: 654 MEAAKQIKERYSYVCPDIAKEFAKYDSDPEKWIKSHKMSGSAKYPDFSFDVGYEKFLGPE 833
++ A++IKE Y YVCPDI KEFAKYD D +++K + + DVGYE+F+ PE
Sbjct: 243 LKTAQEIKEEYCYVCPDIVKEFAKYDRDRSRFLKHTITQPGGR--QVTVDVGYERFMAPE 300
Query: 834 VFF 842
+FF
Sbjct: 301 IFF 303
>sp|P32390|ARP3_SCHPO Actin-like protein 3 (Actin-related protein 3)
Length = 427
Score = 320 bits (821), Expect = 2e-87
Identities = 160/295 (54%), Positives = 215/295 (72%), Gaps = 17/295 (5%)
Frame = +3
Query: 9 VVIDNGTGYSKLGFADNQEPQFIIPSCIATREGK-------------MGSKDSRRIGT-- 143
+++DNGTGYSKLG+A N P ++ P+ IATR M SK S + +
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKR 67
Query: 144 GLDDLNFYIGDEAQAMEGKNDFSVRWPIRHGVVEDWDLHERFMEQAIFKMLRAEPEDHYF 323
+DL+F+IG++A + +S+ +PIRHG +E+WD ERF +Q++FK LR EPEDHYF
Sbjct: 68 ATEDLDFFIGNDA-LKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126
Query: 324 LLTEPPLNTPENREFTAEIMFETFNVPGLYIAVQAVLALAASWTSRPANERTLTGTVIDS 503
LLTEPPLN PENRE TAEIMFE+FN GLYIAVQAVLALAASWTS +R+LTGTV+DS
Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDS 186
Query: 504 GDGVTHVIPVVDGYVIGSAIKHIPIAGRDITFFIQQLLRERETVIPPDMSMEAAKQIKER 683
GDGVTH+IPV +GYVIGS+IK +P+AGRD+T+F+Q LLR+R PD S++ A++IKE
Sbjct: 187 GDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRN---EPDSSLKTAERIKEE 243
Query: 684 YSYVCPDIAKEFAKYDSDPEKWIK--SHKMSGSAKYPDFSFDVGYEKFLGPEVFF 842
YVCPDI KEF+++D +P++++K S ++G + + DVG+E+FL PE+FF
Sbjct: 244 CCYVCPDIVKEFSRFDREPDRYLKYASESITGHST----TIDVGFERFLAPEIFF 294
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,294,362
Number of Sequences: 369166
Number of extensions: 2113250
Number of successful extensions: 7023
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6195
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8245425915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)