DrC_00881
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00881 (908 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q69BJ7|UCRI_SAISC Ubiquinol-cytochrome c reductase iron-... 237 4e-62 sp|P13272|UCRI_BOVIN Ubiquinol-cytochrome c reductase iron-... 236 7e-62 sp|Q69BJ8|UCRI_LAGLA Ubiquinol-cytochrome c reductase iron-... 234 3e-61 sp|Q69BJ9|UCRI_AOTAZ Ubiquinol-cytochrome c reductase iron-... 233 4e-61 sp|Q9CR68|UCRI_MOUSE Ubiquinol-cytochrome c reductase iron-... 230 5e-60 sp|Q69BK0|UCRI_COLPO Ubiquinol-cytochrome c reductase iron-... 230 5e-60 sp|Q69BK1|UCRI_CERAE Ubiquinol-cytochrome c reductase iron-... 230 5e-60 sp|Q69BK4|UCRI_GORGO Ubiquinol-cytochrome c reductase iron-... 229 8e-60 sp|Q69BK2|UCRI_THEGE Ubiquinol-cytochrome c reductase iron-... 229 1e-59 sp|Q69BK5|UCRI_PANTR Ubiquinol-cytochrome c reductase iron-... 229 1e-59
>sp|Q69BJ7|UCRI_SAISC Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 237 bits (604), Expect = 4e-62 Identities = 119/237 (50%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Frame = +1 Query: 145 EKIILDNSQSLLHGKLFKRNFKLWPSSVSVSLNGPMQVRLIHTEFCKVPEF-EYRREELK 321 E +LD + +L + P SV LN P VR HT+ KVP+F +YRR E+ Sbjct: 39 EPPVLDPKRPILSRESLSGQAARRPLVASVGLNVPASVRYSHTDI-KVPDFSDYRRSEVL 97 Query: 322 PSTTIDRNTDVERRFPSYXXXXXXXXXXXXXXRDLVTAALSSMGPNAKTLSEASIEVDLS 501 T R + R+ SY + +VT +SSM +A L+ + IE+ LS Sbjct: 98 DKTKSSRESSDARKVFSYMVTATTAVGVTYAAKSIVTQFISSMSASADVLAMSKIEIKLS 157 Query: 502 SIPEGKSVVMKWRNKPLFVRHRTAEDIAREGAVNKADLRHPEDDSERVQKPEWLILIGIC 681 IPEGK++ KWR KPLFVRHRT ++I +E AV + LR P+ D +RV+KPEW+ILIG+C Sbjct: 158 DIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWMILIGVC 217 Query: 682 THLGCVPISNAGEYNGYYCPCHGSHYDGSGRIRKGPAPFNLEVPDYKFINDKTVVVG 852 THLGCVPI+NAG++ GYYCPCHGSHYD SGRIRKGPAP NLEVP Y+F++D VVVG Sbjct: 218 THLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFLSDDMVVVG 274
>sp|P13272|UCRI_BOVIN Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (Rieske iron-sulfur protein) (RISP) [Contains: Ubiquinol-cytochrome c reductase 8 kDa protein (Complex III subunit IX)] Length = 274 Score = 236 bits (602), Expect = 7e-62 Identities = 120/237 (50%), Positives = 157/237 (66%), Gaps = 1/237 (0%) Frame = +1 Query: 145 EKIILDNSQSLLHGKLFKRNFKLWPSSVSVSLNGPMQVRLIHTEFCKVPEF-EYRREELK 321 E +LD +S+L + + P SVSLN P VR HT+ KVP+F +YRR E+ Sbjct: 39 ESPVLDLKRSVLCRESLRGQAAGRPLVASVSLNVPASVRYSHTDI-KVPDFSDYRRPEVL 97 Query: 322 PSTTIDRNTDVERRFPSYXXXXXXXXXXXXXXRDLVTAALSSMGPNAKTLSEASIEVDLS 501 ST + + R+ SY +++V+ +SSM +A L+ + IE+ LS Sbjct: 98 DSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLS 157 Query: 502 SIPEGKSVVMKWRNKPLFVRHRTAEDIAREGAVNKADLRHPEDDSERVQKPEWLILIGIC 681 IPEGK++ KWR KPLFVRHRT ++I +E AV + LR P+ D ERV+KPEW+ILIG+C Sbjct: 158 DIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVC 217 Query: 682 THLGCVPISNAGEYNGYYCPCHGSHYDGSGRIRKGPAPFNLEVPDYKFINDKTVVVG 852 THLGCVPI+NAG++ GYYCPCHGSHYD SGRIRKGPAP NLEVP Y+F +D V+VG Sbjct: 218 THLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPSYEFTSDDMVIVG 274
>sp|Q69BJ8|UCRI_LAGLA Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 234 bits (596), Expect = 3e-61 Identities = 118/237 (49%), Positives = 151/237 (63%), Gaps = 1/237 (0%) Frame = +1 Query: 145 EKIILDNSQSLLHGKLFKRNFKLWPSSVSVSLNGPMQVRLIHTEFCKVPEF-EYRREELK 321 E +LD + +L + P SV LN P VR HT+ KVP+F +YRR E+ Sbjct: 39 EPPVLDPKRPILSRESLSGQAARRPLVASVGLNVPASVRYSHTDI-KVPDFSDYRRSEVL 97 Query: 322 PSTTIDRNTDVERRFPSYXXXXXXXXXXXXXXRDLVTAALSSMGPNAKTLSEASIEVDLS 501 T R + R+ SY + +VT +SSM +A L+ + IE+ LS Sbjct: 98 DKTKSSRESSDARKGFSYLVTAATAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIKLS 157 Query: 502 SIPEGKSVVMKWRNKPLFVRHRTAEDIAREGAVNKADLRHPEDDSERVQKPEWLILIGIC 681 IPEGK++ KWR KPLFVRHRT ++I +E AV + LR P+ D +RV+KPEW+ILIG+C Sbjct: 158 DIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWMILIGVC 217 Query: 682 THLGCVPISNAGEYNGYYCPCHGSHYDGSGRIRKGPAPFNLEVPDYKFINDKTVVVG 852 THLGCVPI+NAG++ GYYCPCHGSHYD SGRIRKGPAP NLEVP Y+F D V+VG Sbjct: 218 THLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFTGDDMVIVG 274
>sp|Q69BJ9|UCRI_AOTAZ Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 233 bits (595), Expect = 4e-61 Identities = 120/239 (50%), Positives = 156/239 (65%), Gaps = 1/239 (0%) Frame = +1 Query: 139 PKEKIILDNSQSLLHGKLFKRNFKLWPSSVSVSLNGPMQVRLIHTEFCKVPEF-EYRREE 315 PK I+ S+ L G+ +R P +V LN P VR HT+ KVP+F +YRR E Sbjct: 45 PKRPIL---SRESLSGQAARR-----PLVATVGLNVPASVRYSHTDI-KVPDFSDYRRSE 95 Query: 316 LKPSTTIDRNTDVERRFPSYXXXXXXXXXXXXXXRDLVTAALSSMGPNAKTLSEASIEVD 495 + +T R + R+ SY + +VT +SSM +A L+ + IE+ Sbjct: 96 VLDTTKSSRESSDARKGFSYLVTATTAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIK 155 Query: 496 LSSIPEGKSVVMKWRNKPLFVRHRTAEDIAREGAVNKADLRHPEDDSERVQKPEWLILIG 675 LS IPEGK++ KWR KPLFVRHRT ++I +E AV + LR P+ D +RV+KPEW+ILIG Sbjct: 156 LSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWMILIG 215 Query: 676 ICTHLGCVPISNAGEYNGYYCPCHGSHYDGSGRIRKGPAPFNLEVPDYKFINDKTVVVG 852 +CTHLGCVPI+NAG++ GYYCPCHGSHYD SGRIRKGPAP NLEVP Y+F +D V+VG Sbjct: 216 VCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFTSDDLVIVG 274
>sp|Q9CR68|UCRI_MOUSE Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 230 bits (586), Expect = 5e-60 Identities = 113/213 (53%), Positives = 146/213 (68%), Gaps = 1/213 (0%) Frame = +1 Query: 217 PSSVSVSLNGPMQVRLIHTEFCKVPEF-EYRREELKPSTTIDRNTDVERRFPSYXXXXXX 393 P +V LN P VR HT+ KVP+F +YRR E+ ST + + R+ SY Sbjct: 63 PLVATVGLNVPASVRFSHTDV-KVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATT 121 Query: 394 XXXXXXXXRDLVTAALSSMGPNAKTLSEASIEVDLSSIPEGKSVVMKWRNKPLFVRHRTA 573 +++V+ +SSM +A L+ + IE+ LS IPEGK++ KWR KPLFVRHRT Sbjct: 122 TVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTK 181 Query: 574 EDIAREGAVNKADLRHPEDDSERVQKPEWLILIGICTHLGCVPISNAGEYNGYYCPCHGS 753 ++I +E AV + LR P+ D +RV+KPEW+ILIG+CTHLGCVPI+NAG++ GYYCPCHGS Sbjct: 182 KEIDQEAAVEVSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGS 241 Query: 754 HYDGSGRIRKGPAPFNLEVPDYKFINDKTVVVG 852 HYD SGRIRKGPAP NLEVP Y+F +D VVVG Sbjct: 242 HYDASGRIRKGPAPLNLEVPAYEFTSDDVVVVG 274
>sp|Q69BK0|UCRI_COLPO Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 230 bits (586), Expect = 5e-60 Identities = 120/230 (52%), Positives = 150/230 (65%), Gaps = 1/230 (0%) Frame = +1 Query: 166 SQSLLHGKLFKRNFKLWPSSVSVSLNGPMQVRLIHTEFCKVPEF-EYRREELKPSTTIDR 342 S+ L G+ +R P SV LN P V HT+ KVP+F +YRR E+ ST R Sbjct: 51 SRESLSGQAVRR-----PLVASVGLNVPASVCYSHTDV-KVPDFCDYRRPEVLDSTKSSR 104 Query: 343 NTDVERRFPSYXXXXXXXXXXXXXXRDLVTAALSSMGPNAKTLSEASIEVDLSSIPEGKS 522 + R+ SY ++ VT +SSM +A L+ A IEV LS IPEGK+ Sbjct: 105 ESSEARKSFSYMVTAVTTVGVAYAAKNAVTQFVSSMSASADVLAMAKIEVKLSDIPEGKN 164 Query: 523 VVMKWRNKPLFVRHRTAEDIAREGAVNKADLRHPEDDSERVQKPEWLILIGICTHLGCVP 702 + KWR KPLFVRHRT ++I +E AV + LR P+ D +RV+KPEW+ILIG+CTHLGCVP Sbjct: 165 MAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVP 224 Query: 703 ISNAGEYNGYYCPCHGSHYDGSGRIRKGPAPFNLEVPDYKFINDKTVVVG 852 I+NAG++ GYYCPCHGSHYD SGRIR GPAP NLEVP Y+F +D VVVG Sbjct: 225 IANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVVVG 274
>sp|Q69BK1|UCRI_CERAE Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 230 bits (586), Expect = 5e-60 Identities = 119/230 (51%), Positives = 150/230 (65%), Gaps = 1/230 (0%) Frame = +1 Query: 166 SQSLLHGKLFKRNFKLWPSSVSVSLNGPMQVRLIHTEFCKVPEF-EYRREELKPSTTIDR 342 S+ L G+ +R P SV LN P V HT+ KVP+F +YRR E+ ST R Sbjct: 51 SRESLSGQAVRR-----PLVASVGLNVPASVCYSHTDV-KVPDFYDYRRLEVLDSTKSSR 104 Query: 343 NTDVERRFPSYXXXXXXXXXXXXXXRDLVTAALSSMGPNAKTLSEASIEVDLSSIPEGKS 522 + R+ SY +++VT +SSM +A L+ A IE++LS IPEGK+ Sbjct: 105 ESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFISSMSASADVLAMAKIEINLSDIPEGKN 164 Query: 523 VVMKWRNKPLFVRHRTAEDIAREGAVNKADLRHPEDDSERVQKPEWLILIGICTHLGCVP 702 + KWR KPLFVRHRT ++I E AV + LR P+ D +RV+KPEW+ILIG+CTHLGCVP Sbjct: 165 MAFKWRGKPLFVRHRTQKEIEEEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVP 224 Query: 703 ISNAGEYNGYYCPCHGSHYDGSGRIRKGPAPFNLEVPDYKFINDKTVVVG 852 I+NAG++ GYYCPCHGSHYD SGRIR GPAP NLEVP Y+F D VVVG Sbjct: 225 IANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPPYEFTGDDVVVVG 274
>sp|Q69BK4|UCRI_GORGO Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (Rieske iron-sulfur protein) (RISP) sp|P47985|UCRI_HUMAN Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 229 bits (584), Expect = 8e-60 Identities = 119/230 (51%), Positives = 150/230 (65%), Gaps = 1/230 (0%) Frame = +1 Query: 166 SQSLLHGKLFKRNFKLWPSSVSVSLNGPMQVRLIHTEFCKVPEF-EYRREELKPSTTIDR 342 S+ L G+ +R P SV LN P V HT+ KVP+F EYRR E+ ST R Sbjct: 51 SRESLSGQAVRR-----PLVASVGLNVPASVCYSHTDI-KVPDFSEYRRLEVLDSTKSSR 104 Query: 343 NTDVERRFPSYXXXXXXXXXXXXXXRDLVTAALSSMGPNAKTLSEASIEVDLSSIPEGKS 522 + R+ SY ++ VT +SSM +A L+ A IE+ LS IPEGK+ Sbjct: 105 ESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKN 164 Query: 523 VVMKWRNKPLFVRHRTAEDIAREGAVNKADLRHPEDDSERVQKPEWLILIGICTHLGCVP 702 + KWR KPLFVRHRT ++I +E AV + LR P+ D +RV+KPEW+ILIG+CTHLGCVP Sbjct: 165 MAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVP 224 Query: 703 ISNAGEYNGYYCPCHGSHYDGSGRIRKGPAPFNLEVPDYKFINDKTVVVG 852 I+NAG++ GYYCPCHGSHYD SGRIR GPAP NLEVP Y+F +D V+VG Sbjct: 225 IANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
>sp|Q69BK2|UCRI_THEGE Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 229 bits (583), Expect = 1e-59 Identities = 120/230 (52%), Positives = 151/230 (65%), Gaps = 1/230 (0%) Frame = +1 Query: 166 SQSLLHGKLFKRNFKLWPSSVSVSLNGPMQVRLIHTEFCKVPEF-EYRREELKPSTTIDR 342 S+ L G+ +R P SV LN P V HT+ KVP+F +YRR E+ ST R Sbjct: 51 SRESLSGQAVRR-----PLVASVGLNVPASVCYSHTDV-KVPDFYDYRRLEVLDSTKSSR 104 Query: 343 NTDVERRFPSYXXXXXXXXXXXXXXRDLVTAALSSMGPNAKTLSEASIEVDLSSIPEGKS 522 + R+ SY ++ VT +SSM +A L+ A IE++LS IPEGK+ Sbjct: 105 ESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFISSMSASADVLAMAKIEINLSDIPEGKN 164 Query: 523 VVMKWRNKPLFVRHRTAEDIAREGAVNKADLRHPEDDSERVQKPEWLILIGICTHLGCVP 702 + KWR KPLFVRHRT ++I +E AV + LR P+ D +RV+KPEW+ILIGICTHLGCVP Sbjct: 165 MAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGICTHLGCVP 224 Query: 703 ISNAGEYNGYYCPCHGSHYDGSGRIRKGPAPFNLEVPDYKFINDKTVVVG 852 I+NAG++ GYYCPCHGSHYD SGRIR GPAP NLEVP Y+F +D VVVG Sbjct: 225 IANAGDFGGYYCPCHGSHYDVSGRIRLGPAPLNLEVPPYEFTSDDMVVVG 274
>sp|Q69BK5|UCRI_PANTR Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (Rieske iron-sulfur protein) (RISP) sp|Q69BK6|UCRI_PANPA Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (Rieske iron-sulfur protein) (RISP) Length = 274 Score = 229 bits (583), Expect = 1e-59 Identities = 119/230 (51%), Positives = 150/230 (65%), Gaps = 1/230 (0%) Frame = +1 Query: 166 SQSLLHGKLFKRNFKLWPSSVSVSLNGPMQVRLIHTEFCKVPEF-EYRREELKPSTTIDR 342 S+ L G+ +R P SV LN P V HT+ KVP+F EYRR E+ ST R Sbjct: 51 SRESLSGQAVRR-----PLVASVGLNVPASVCYSHTDV-KVPDFSEYRRLEVLDSTKSSR 104 Query: 343 NTDVERRFPSYXXXXXXXXXXXXXXRDLVTAALSSMGPNAKTLSEASIEVDLSSIPEGKS 522 + R+ SY ++ VT +SSM +A L+ A IE+ LS IPEGK+ Sbjct: 105 ESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKN 164 Query: 523 VVMKWRNKPLFVRHRTAEDIAREGAVNKADLRHPEDDSERVQKPEWLILIGICTHLGCVP 702 + KWR KPLFVRHRT ++I +E AV + LR P+ D +RV+KPEW+ILIG+CTHLGCVP Sbjct: 165 MAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVP 224 Query: 703 ISNAGEYNGYYCPCHGSHYDGSGRIRKGPAPFNLEVPDYKFINDKTVVVG 852 I+NAG++ GYYCPCHGSHYD SGRIR GPAP NLEVP Y+F +D V+VG Sbjct: 225 IANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,739,841
Number of Sequences: 369166
Number of extensions: 2183545
Number of successful extensions: 5450
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5393
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9222552960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
