DrC_00708
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00708 (924 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q9CYL5|GAPR1_MOUSE Golgi-associated plant pathogenesis-r... 108 3e-23 sp|Q9H4G4|GAPR1_HUMAN Golgi-associated plant pathogenesis-r... 108 3e-23 sp|P47032|PRY1_YEAST PRY1 protein precursor (Pathogen relat... 94 7e-19 sp|P47033|PRY3_YEAST PRY3 protein (Pathogen related in Sc 3) 91 5e-18 sp|P08299|PR1A_TOBAC Pathogenesis-related protein 1A precur... 86 1e-16 sp|P07053|PR1B_TOBAC Pathogenesis-related protein 1B precur... 86 1e-16 sp|P09042|PR1C_TOBAC Pathogenesis-related protein 1C precur... 85 3e-16 sp|Q41359|PR1_SAMNI Pathogenesis-related protein PR-1 type ... 83 1e-15 sp|Q04108|PR04_LYCES Pathogenesis-related leaf protein 4 pr... 83 1e-15 sp|Q8JI38|CRVP_LATSE Latisemin precursor 83 1e-15
>sp|Q9CYL5|GAPR1_MOUSE Golgi-associated plant pathogenesis-related protein 1 (Golgi-associated PR-1 protein) (GAPR-1) (Glioma pathogenesis-related protein 2) (GliPR 2) Length = 154 Score = 108 bits (269), Expect = 3e-23 Identities = 64/155 (41%), Positives = 84/155 (54%), Gaps = 4/155 (2%) Frame = +1 Query: 142 SDHKDVNETALKHHNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHS--KSEGKY 315 S K N LK HN+ RA H VP L L L + AQ+Y++ LA T HS S G+ Sbjct: 4 SASKQFNNEVLKAHNEYRAQHGVPPLKLCKKLNREAQQYSEALASTRILKHSPESSRGQC 63 Query: 316 GENLASSFNSKPGYIFTGDAATQNWYDEIKDYKFNEEAQQTGKIGHFSQVVWKDTKLCGF 495 GENLA + Y TG WY EIK Y F + +G GHF+ +VWK+TK G Sbjct: 64 GENLAWA-----SYDQTGKDVADRWYSEIKSYNFQQPGFTSGT-GHFTAMVWKNTKKIGV 117 Query: 496 GRAKCSNGNFIIVGQYKPPGNFL--GKFKENILSP 594 G+A S+G+ +V +Y P GN + G F+EN+ P Sbjct: 118 GKASASDGSSFVVARYFPAGNIVNQGFFEENVPPP 152
>sp|Q9H4G4|GAPR1_HUMAN Golgi-associated plant pathogenesis-related protein 1 (Golgi-associated PR-1 protein) (GAPR-1) (Glioma pathogenesis-related protein 2) (GliPR 2) Length = 154 Score = 108 bits (269), Expect = 3e-23 Identities = 63/155 (40%), Positives = 86/155 (55%), Gaps = 4/155 (2%) Frame = +1 Query: 142 SDHKDVNETALKHHNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHS--KSEGKY 315 S K + LK HN+ R H VP L L +L + AQ+Y++ LA T HS S G+ Sbjct: 4 SASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQC 63 Query: 316 GENLASSFNSKPGYIFTGDAATQNWYDEIKDYKFNEEAQQTGKIGHFSQVVWKDTKLCGF 495 GENLA + Y TG WY EIK+Y F + +G GHF+ +VWK+TK G Sbjct: 64 GENLAWA-----SYDQTGKEVADRWYSEIKNYNFQQPGFTSGT-GHFTAMVWKNTKKMGV 117 Query: 496 GRAKCSNGNFIIVGQYKPPGNFL--GKFKENILSP 594 G+A S+G+ +V +Y P GN + G F+EN+L P Sbjct: 118 GKASASDGSSFVVARYFPAGNVVNEGFFEENVLPP 152
>sp|P47032|PRY1_YEAST PRY1 protein precursor (Pathogen related in Sc 1) Length = 299 Score = 93.6 bits (231), Expect = 7e-19 Identities = 58/152 (38%), Positives = 81/152 (53%), Gaps = 3/152 (1%) Frame = +1 Query: 139 NSDHKDVNETALKHHNKLRALHR-VPNLTLDWDLAKSAQEYADKLAKTNSFSHSKSEGKY 315 +SD D + L HNK RALH+ P L+ LA AQ+YAD + + +HS G Y Sbjct: 156 DSDLSDFASSVLAEHNKKRALHKDTPALSWSDTLASYAQDYADNYDCSGTLTHSG--GPY 213 Query: 316 GENLASSFNSKPGYIFTGDAATQNWYDEIKDYKFNEEAQQTGKIGHFSQVVWKDTKLCGF 495 GENLA ++ G AA WY+EI +Y F+ + GHF+QVVWK T G Sbjct: 214 GENLALGYD--------GPAAVDAWYNEISNYDFSNPGFSSNT-GHFTQVVWKSTTQVGC 264 Query: 496 GRAKCSN--GNFIIVGQYKPPGNFLGKFKENI 585 G C G+++I Y P GN+ G++ +N+ Sbjct: 265 GIKTCGGAWGDYVIC-SYDPAGNYEGEYADNV 295
>sp|P47033|PRY3_YEAST PRY3 protein (Pathogen related in Sc 3) Length = 881 Score = 90.9 bits (224), Expect = 5e-18 Identities = 61/141 (43%), Positives = 72/141 (51%), Gaps = 3/141 (2%) Frame = +1 Query: 172 LKHHNKLRALHRVPNLTLDWD--LAKSAQEYADKLAKTNSFSHSKSEGKYGENLASSFNS 345 L HNK RALH V L W LA AQ YAD+ + +HS +G YGENLA Sbjct: 30 LNEHNKFRALH-VDTAPLTWSDTLATYAQNYADQYDCSGVLTHS--DGPYGENLAL---- 82 Query: 346 KPGYIFTGDAATQNWYDEIKDYKFNEEAQQTGKIGHFSQVVWKDTKLCGFGRAKC-SNGN 522 GY TG A WY EI Y ++ GHF+QVVWK T G G C + N Sbjct: 83 --GYTDTG--AVDAWYGEISKYNYSNPGFSEST-GHFTQVVWKSTAEIGCGYKYCGTTWN 137 Query: 523 FIIVGQYKPPGNFLGKFKENI 585 IV Y PPGN+LG+F E + Sbjct: 138 NYIVCSYNPPGNYLGEFAEEV 158
>sp|P08299|PR1A_TOBAC Pathogenesis-related protein 1A precursor (PR-1A) Length = 168 Score = 85.9 bits (211), Expect = 1e-16 Identities = 50/134 (37%), Positives = 71/134 (52%), Gaps = 1/134 (0%) Frame = +1 Query: 172 LKHHNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHSKSEGKYGENLASSFNSKP 351 L HN RA V LT D +A AQ YA +LA + HS G+YGENLA Sbjct: 38 LDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHS--HGQYGENLAEG----S 91 Query: 352 GYIFTGDAATQNWYDEIKDYKFNEEAQQTGKI-GHFSQVVWKDTKLCGFGRAKCSNGNFI 528 G T A + W DE + Y + G++ GH++QVVW+++ G R +C+NG ++ Sbjct: 92 GDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGGYV 151 Query: 529 IVGQYKPPGNFLGK 570 + Y PPGN+ G+ Sbjct: 152 VSCNYDPPGNYRGE 165
>sp|P07053|PR1B_TOBAC Pathogenesis-related protein 1B precursor (PR-1B) Length = 168 Score = 85.9 bits (211), Expect = 1e-16 Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 1/145 (0%) Frame = +1 Query: 139 NSDHKDVNETALKHHNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHSKSEGKYG 318 +S ++ + L HN RA V LT D +A AQ Y +LA + HS G+YG Sbjct: 27 SSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHS--HGQYG 84 Query: 319 ENLASSFNSKPGYIFTGDAATQNWYDEIKDYKFNEEAQQTGKI-GHFSQVVWKDTKLCGF 495 ENLA G T A + W DE + Y + G++ GH++QVVW+++ G Sbjct: 85 ENLAQG----SGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGC 140 Query: 496 GRAKCSNGNFIIVGQYKPPGNFLGK 570 R KC+NG +++ Y PPGN +G+ Sbjct: 141 ARVKCNNGGYVVSCNYDPPGNVIGQ 165
>sp|P09042|PR1C_TOBAC Pathogenesis-related protein 1C precursor (PR-1C) Length = 168 Score = 84.7 bits (208), Expect = 3e-16 Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 1/134 (0%) Frame = +1 Query: 172 LKHHNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHSKSEGKYGENLASSFNSKP 351 L HN RA V LT D +A AQ YA +LA + HS G+YGENLA Sbjct: 38 LDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHS--HGQYGENLAWG----S 91 Query: 352 GYIFTGDAATQNWYDEIKDYKFNEEAQQTGKI-GHFSQVVWKDTKLCGFGRAKCSNGNFI 528 G T A + W +E + Y + G++ GH++QVVW+++ G R +C+NG +I Sbjct: 92 GDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGGYI 151 Query: 529 IVGQYKPPGNFLGK 570 + Y PPGN +GK Sbjct: 152 VSCNYDPPGNVIGK 165
>sp|Q41359|PR1_SAMNI Pathogenesis-related protein PR-1 type precursor Length = 167 Score = 83.2 bits (204), Expect = 1e-15 Identities = 50/131 (38%), Positives = 69/131 (52%), Gaps = 1/131 (0%) Frame = +1 Query: 181 HNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHSKSEGKYGENLASSFNSKPGYI 360 HN R+ V +T D +A A++YA A HS + +YGENLA F S G+ Sbjct: 39 HNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRLVHS-GDPRYGENLA--FGS--GFE 93 Query: 361 FTGDAATQNWYDEIKDYKFNEEAQQTGKI-GHFSQVVWKDTKLCGFGRAKCSNGNFIIVG 537 TG A W E DY N GK+ GH++QVVW+++ G R +C+NG + I Sbjct: 94 LTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNSVRIGCARVRCNNGAWFITC 153 Query: 538 QYKPPGNFLGK 570 Y PPGN+ G+ Sbjct: 154 NYSPPGNYAGQ 164
>sp|Q04108|PR04_LYCES Pathogenesis-related leaf protein 4 precursor (P4) Length = 159 Score = 82.8 bits (203), Expect = 1e-15 Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 1/131 (0%) Frame = +1 Query: 181 HNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHSKSEGKYGENLASSFNSKPGYI 360 HN RA V ++ D +LA AQ YA+ A + HS + GENLA K G Sbjct: 35 HNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA----GENLA-----KGGGD 85 Query: 361 FTGDAATQNWYDEIKDYKFNEEAQQTGKI-GHFSQVVWKDTKLCGFGRAKCSNGNFIIVG 537 FTG AA Q W E DY + GK+ GH++QVVW+++ G GRA+C+NG + I Sbjct: 86 FTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVWRNSVRLGCGRARCNNGWWFISC 145 Query: 538 QYKPPGNFLGK 570 Y P GN++G+ Sbjct: 146 NYDPVGNWVGE 156
>sp|Q8JI38|CRVP_LATSE Latisemin precursor Length = 238 Score = 82.8 bits (203), Expect = 1e-15 Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 8/151 (5%) Frame = +1 Query: 139 NSDHKDVNETALKHHNKLRALHRVPN---LTLDW--DLAKSAQEYADKLAKTNSFSHSKS 303 +S+ ++ + + HN LR R L ++W D A++AQ +AD+ + +S SH ++ Sbjct: 27 SSNKRENQKEIVDKHNALRRSVRPTARNMLQMEWNSDAAQNAQRWADRCSFAHSPSHLRT 86 Query: 304 EGKY--GENLASSFNSKPGYIFTGDAATQNWYDEIKDYKFNEEAQQTGK-IGHFSQVVWK 474 GK+ GENL S S+P + Q+WYDE K++ ++ A G IGH++Q+VW Sbjct: 87 VGKFSCGENLFMS--SQP---YAWSRVIQSWYDENKNFIYDVGANPPGSVIGHYTQIVWY 141 Query: 475 DTKLCGFGRAKCSNGNFIIVGQYKPPGNFLG 567 + L G A+CS+ ++ V QY P GN +G Sbjct: 142 KSHLLGCAAARCSSSKYLYVCQYCPAGNIIG 172
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.316 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,186,859
Number of Sequences: 369166
Number of extensions: 1975737
Number of successful extensions: 5671
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5472
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9462723610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
Cluster detail
