Planaria EST Database


DrC_00708

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00708
         (924 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9CYL5|GAPR1_MOUSE  Golgi-associated plant pathogenesis-r...   108   3e-23
sp|Q9H4G4|GAPR1_HUMAN  Golgi-associated plant pathogenesis-r...   108   3e-23
sp|P47032|PRY1_YEAST  PRY1 protein precursor (Pathogen relat...    94   7e-19
sp|P47033|PRY3_YEAST  PRY3 protein (Pathogen related in Sc 3)      91   5e-18
sp|P08299|PR1A_TOBAC  Pathogenesis-related protein 1A precur...    86   1e-16
sp|P07053|PR1B_TOBAC  Pathogenesis-related protein 1B precur...    86   1e-16
sp|P09042|PR1C_TOBAC  Pathogenesis-related protein 1C precur...    85   3e-16
sp|Q41359|PR1_SAMNI  Pathogenesis-related protein PR-1 type ...    83   1e-15
sp|Q04108|PR04_LYCES  Pathogenesis-related leaf protein 4 pr...    83   1e-15
sp|Q8JI38|CRVP_LATSE  Latisemin precursor                          83   1e-15
>sp|Q9CYL5|GAPR1_MOUSE Golgi-associated plant pathogenesis-related protein 1
           (Golgi-associated PR-1 protein) (GAPR-1) (Glioma
           pathogenesis-related protein 2) (GliPR 2)
          Length = 154

 Score =  108 bits (269), Expect = 3e-23
 Identities = 64/155 (41%), Positives = 84/155 (54%), Gaps = 4/155 (2%)
 Frame = +1

Query: 142 SDHKDVNETALKHHNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHS--KSEGKY 315
           S  K  N   LK HN+ RA H VP L L   L + AQ+Y++ LA T    HS   S G+ 
Sbjct: 4   SASKQFNNEVLKAHNEYRAQHGVPPLKLCKKLNREAQQYSEALASTRILKHSPESSRGQC 63

Query: 316 GENLASSFNSKPGYIFTGDAATQNWYDEIKDYKFNEEAQQTGKIGHFSQVVWKDTKLCGF 495
           GENLA +      Y  TG      WY EIK Y F +    +G  GHF+ +VWK+TK  G 
Sbjct: 64  GENLAWA-----SYDQTGKDVADRWYSEIKSYNFQQPGFTSGT-GHFTAMVWKNTKKIGV 117

Query: 496 GRAKCSNGNFIIVGQYKPPGNFL--GKFKENILSP 594
           G+A  S+G+  +V +Y P GN +  G F+EN+  P
Sbjct: 118 GKASASDGSSFVVARYFPAGNIVNQGFFEENVPPP 152
>sp|Q9H4G4|GAPR1_HUMAN Golgi-associated plant pathogenesis-related protein 1
           (Golgi-associated PR-1 protein) (GAPR-1) (Glioma
           pathogenesis-related protein 2) (GliPR 2)
          Length = 154

 Score =  108 bits (269), Expect = 3e-23
 Identities = 63/155 (40%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
 Frame = +1

Query: 142 SDHKDVNETALKHHNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHS--KSEGKY 315
           S  K  +   LK HN+ R  H VP L L  +L + AQ+Y++ LA T    HS   S G+ 
Sbjct: 4   SASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQC 63

Query: 316 GENLASSFNSKPGYIFTGDAATQNWYDEIKDYKFNEEAQQTGKIGHFSQVVWKDTKLCGF 495
           GENLA +      Y  TG      WY EIK+Y F +    +G  GHF+ +VWK+TK  G 
Sbjct: 64  GENLAWA-----SYDQTGKEVADRWYSEIKNYNFQQPGFTSGT-GHFTAMVWKNTKKMGV 117

Query: 496 GRAKCSNGNFIIVGQYKPPGNFL--GKFKENILSP 594
           G+A  S+G+  +V +Y P GN +  G F+EN+L P
Sbjct: 118 GKASASDGSSFVVARYFPAGNVVNEGFFEENVLPP 152
>sp|P47032|PRY1_YEAST PRY1 protein precursor (Pathogen related in Sc 1)
          Length = 299

 Score = 93.6 bits (231), Expect = 7e-19
 Identities = 58/152 (38%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
 Frame = +1

Query: 139 NSDHKDVNETALKHHNKLRALHR-VPNLTLDWDLAKSAQEYADKLAKTNSFSHSKSEGKY 315
           +SD  D   + L  HNK RALH+  P L+    LA  AQ+YAD    + + +HS   G Y
Sbjct: 156 DSDLSDFASSVLAEHNKKRALHKDTPALSWSDTLASYAQDYADNYDCSGTLTHSG--GPY 213

Query: 316 GENLASSFNSKPGYIFTGDAATQNWYDEIKDYKFNEEAQQTGKIGHFSQVVWKDTKLCGF 495
           GENLA  ++        G AA   WY+EI +Y F+     +   GHF+QVVWK T   G 
Sbjct: 214 GENLALGYD--------GPAAVDAWYNEISNYDFSNPGFSSNT-GHFTQVVWKSTTQVGC 264

Query: 496 GRAKCSN--GNFIIVGQYKPPGNFLGKFKENI 585
           G   C    G+++I   Y P GN+ G++ +N+
Sbjct: 265 GIKTCGGAWGDYVIC-SYDPAGNYEGEYADNV 295
>sp|P47033|PRY3_YEAST PRY3 protein (Pathogen related in Sc 3)
          Length = 881

 Score = 90.9 bits (224), Expect = 5e-18
 Identities = 61/141 (43%), Positives = 72/141 (51%), Gaps = 3/141 (2%)
 Frame = +1

Query: 172 LKHHNKLRALHRVPNLTLDWD--LAKSAQEYADKLAKTNSFSHSKSEGKYGENLASSFNS 345
           L  HNK RALH V    L W   LA  AQ YAD+   +   +HS  +G YGENLA     
Sbjct: 30  LNEHNKFRALH-VDTAPLTWSDTLATYAQNYADQYDCSGVLTHS--DGPYGENLAL---- 82

Query: 346 KPGYIFTGDAATQNWYDEIKDYKFNEEAQQTGKIGHFSQVVWKDTKLCGFGRAKC-SNGN 522
             GY  TG  A   WY EI  Y ++         GHF+QVVWK T   G G   C +  N
Sbjct: 83  --GYTDTG--AVDAWYGEISKYNYSNPGFSEST-GHFTQVVWKSTAEIGCGYKYCGTTWN 137

Query: 523 FIIVGQYKPPGNFLGKFKENI 585
             IV  Y PPGN+LG+F E +
Sbjct: 138 NYIVCSYNPPGNYLGEFAEEV 158
>sp|P08299|PR1A_TOBAC Pathogenesis-related protein 1A precursor (PR-1A)
          Length = 168

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 50/134 (37%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +1

Query: 172 LKHHNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHSKSEGKYGENLASSFNSKP 351
           L  HN  RA   V  LT D  +A  AQ YA +LA   +  HS   G+YGENLA       
Sbjct: 38  LDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHS--HGQYGENLAEG----S 91

Query: 352 GYIFTGDAATQNWYDEIKDYKFNEEAQQTGKI-GHFSQVVWKDTKLCGFGRAKCSNGNFI 528
           G   T   A + W DE + Y  +      G++ GH++QVVW+++   G  R +C+NG ++
Sbjct: 92  GDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGGYV 151

Query: 529 IVGQYKPPGNFLGK 570
           +   Y PPGN+ G+
Sbjct: 152 VSCNYDPPGNYRGE 165
>sp|P07053|PR1B_TOBAC Pathogenesis-related protein 1B precursor (PR-1B)
          Length = 168

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
 Frame = +1

Query: 139 NSDHKDVNETALKHHNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHSKSEGKYG 318
           +S  ++  +  L  HN  RA   V  LT D  +A  AQ Y  +LA   +  HS   G+YG
Sbjct: 27  SSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHS--HGQYG 84

Query: 319 ENLASSFNSKPGYIFTGDAATQNWYDEIKDYKFNEEAQQTGKI-GHFSQVVWKDTKLCGF 495
           ENLA       G   T   A + W DE + Y  +      G++ GH++QVVW+++   G 
Sbjct: 85  ENLAQG----SGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGC 140

Query: 496 GRAKCSNGNFIIVGQYKPPGNFLGK 570
            R KC+NG +++   Y PPGN +G+
Sbjct: 141 ARVKCNNGGYVVSCNYDPPGNVIGQ 165
>sp|P09042|PR1C_TOBAC Pathogenesis-related protein 1C precursor (PR-1C)
          Length = 168

 Score = 84.7 bits (208), Expect = 3e-16
 Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +1

Query: 172 LKHHNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHSKSEGKYGENLASSFNSKP 351
           L  HN  RA   V  LT D  +A  AQ YA +LA   +  HS   G+YGENLA       
Sbjct: 38  LDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHS--HGQYGENLAWG----S 91

Query: 352 GYIFTGDAATQNWYDEIKDYKFNEEAQQTGKI-GHFSQVVWKDTKLCGFGRAKCSNGNFI 528
           G   T   A + W +E + Y  +      G++ GH++QVVW+++   G  R +C+NG +I
Sbjct: 92  GDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGGYI 151

Query: 529 IVGQYKPPGNFLGK 570
           +   Y PPGN +GK
Sbjct: 152 VSCNYDPPGNVIGK 165
>sp|Q41359|PR1_SAMNI Pathogenesis-related protein PR-1 type precursor
          Length = 167

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 50/131 (38%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
 Frame = +1

Query: 181 HNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHSKSEGKYGENLASSFNSKPGYI 360
           HN  R+   V  +T D  +A  A++YA   A      HS  + +YGENLA  F S  G+ 
Sbjct: 39  HNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRLVHS-GDPRYGENLA--FGS--GFE 93

Query: 361 FTGDAATQNWYDEIKDYKFNEEAQQTGKI-GHFSQVVWKDTKLCGFGRAKCSNGNFIIVG 537
            TG  A   W  E  DY  N      GK+ GH++QVVW+++   G  R +C+NG + I  
Sbjct: 94  LTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNSVRIGCARVRCNNGAWFITC 153

Query: 538 QYKPPGNFLGK 570
            Y PPGN+ G+
Sbjct: 154 NYSPPGNYAGQ 164
>sp|Q04108|PR04_LYCES Pathogenesis-related leaf protein 4 precursor (P4)
          Length = 159

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
 Frame = +1

Query: 181 HNKLRALHRVPNLTLDWDLAKSAQEYADKLAKTNSFSHSKSEGKYGENLASSFNSKPGYI 360
           HN  RA   V  ++ D +LA  AQ YA+  A   +  HS +    GENLA     K G  
Sbjct: 35  HNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA----GENLA-----KGGGD 85

Query: 361 FTGDAATQNWYDEIKDYKFNEEAQQTGKI-GHFSQVVWKDTKLCGFGRAKCSNGNFIIVG 537
           FTG AA Q W  E  DY +       GK+ GH++QVVW+++   G GRA+C+NG + I  
Sbjct: 86  FTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVWRNSVRLGCGRARCNNGWWFISC 145

Query: 538 QYKPPGNFLGK 570
            Y P GN++G+
Sbjct: 146 NYDPVGNWVGE 156
>sp|Q8JI38|CRVP_LATSE Latisemin precursor
          Length = 238

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 8/151 (5%)
 Frame = +1

Query: 139 NSDHKDVNETALKHHNKLRALHRVPN---LTLDW--DLAKSAQEYADKLAKTNSFSHSKS 303
           +S+ ++  +  +  HN LR   R      L ++W  D A++AQ +AD+ +  +S SH ++
Sbjct: 27  SSNKRENQKEIVDKHNALRRSVRPTARNMLQMEWNSDAAQNAQRWADRCSFAHSPSHLRT 86

Query: 304 EGKY--GENLASSFNSKPGYIFTGDAATQNWYDEIKDYKFNEEAQQTGK-IGHFSQVVWK 474
            GK+  GENL  S  S+P   +      Q+WYDE K++ ++  A   G  IGH++Q+VW 
Sbjct: 87  VGKFSCGENLFMS--SQP---YAWSRVIQSWYDENKNFIYDVGANPPGSVIGHYTQIVWY 141

Query: 475 DTKLCGFGRAKCSNGNFIIVGQYKPPGNFLG 567
            + L G   A+CS+  ++ V QY P GN +G
Sbjct: 142 KSHLLGCAAARCSSSKYLYVCQYCPAGNIIG 172
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.316    0.132    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,186,859
Number of Sequences: 369166
Number of extensions: 1975737
Number of successful extensions: 5671
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5472
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9462723610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)

Cluster detail

DrC_00708

  1. Dr_sW_020_D02
  2. Dr_sW_024_C03
  3. Dr_sW_004_L22
  4. Dr_sW_028_B08
  5. Dr_sW_018_H18
  6. Dr_sW_001_H10
  7. Dr_sW_022_B10
  8. Dr_sW_011_F23
  9. Dr_sW_008_K19
  10. Dr_sW_005_K21
  11. Dr_sW_017_N02
  12. Dr_sW_011_H21
  13. Dr_sW_024_A11
  14. Dr_sW_002_B11
  15. Dr_sW_012_N05
  16. Dr_sW_013_N01
  17. Dr_sW_001_B10
  18. Dr_sW_017_E24
  19. Dr_sW_001_G07
  20. Dr_sW_017_F23
  21. Dr_sW_012_J21