Planaria EST Database

DrC_00478

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00478
         (1757 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P38607|VATA2_HUMAN  Vacuolar ATP synthase catalytic subun...   917   0.0  
sp|Q27331|VATA2_DROME  Vacuolar ATP synthase catalytic subun...   915   0.0  
sp|P31400|VATA_MANSE  Vacuolar ATP synthase catalytic subuni...   910   0.0  
sp|P38606|VATA1_HUMAN  Vacuolar ATP synthase catalytic subun...   904   0.0  
sp|P31404|VATA1_BOVIN  Vacuolar ATP synthase catalytic subun...   898   0.0  
sp|P48602|VATA1_DROME  Vacuolar ATP synthase catalytic subun...   895   0.0  
sp|Q29048|VATA1_PIG  Vacuolar ATP synthase catalytic subunit...   895   0.0  
sp|P50516|VATA1_MOUSE  Vacuolar ATP synthase catalytic subun...   894   0.0  
sp|O16109|VATA_AEDAE  Vacuolar ATP synthase catalytic subuni...   857   0.0  
sp|P13548|VATA_PHAAU  Vacuolar ATP synthase catalytic subuni...   767   0.0  

>sp|P38607|VATA2_HUMAN Vacuolar ATP synthase catalytic subunit A, osteoclast isoform
            (V-ATPase A subunit 2) (Vacuolar proton pump alpha
            subunit 2) (V-ATPase 69 kDa subunit 2) (Isoform HO68)
          Length = 615

 Score =  917 bits (2370), Expect = 0.0
 Identities = 453/572 (79%), Positives = 512/572 (89%)
 Frame = +2

Query: 2    GYGKLVGEIIRLEGDFATIQVYEDTSGVTVGDPVIKTGKPLSVELGPGIMDSIFDGIQRP 181
            GY +LVGEIIRLEGD ATIQVYEDTSGVTVGDPV++TGKPLSVELGPGIM SIFDGIQRP
Sbjct: 45   GYYELVGEIIRLEGDMATIQVYEDTSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRP 104

Query: 182  LKFIASQSKSIYIPRGVNVPALNRSIKWDFQPVNVSSGMHVSGGDVFGIVQENTLVKHKI 361
            LK I   S SIYIP+GVNVPAL+R+ +WDF PV+V  G H++GGD++G+V ENTLVKHK+
Sbjct: 105  LKDINELSNSIYIPKGVNVPALSRTAQWDFSPVSVKVGSHITGGDLYGLVHENTLVKHKL 164

Query: 362  MVHPKEKGIVKWIAPRGNYTVDETVLITEFNKVQTKHTMXXXXXXXXXXXXADKLPANYP 541
            ++ P+ KG V +IA  GNYTVD+ VL TEF+  ++K TM             +KLPANYP
Sbjct: 165  LLPPRAKGTVTYIAEPGNYTVDDVVLETEFDGERSKFTMLQVWPVRQPRPVTEKLPANYP 224

Query: 542  LLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKFSNSDVIIYVGCGERGNEMSE 721
            LLTGQRVLD+LFPCVQGGTTAIPGAFGCGKTVISQSLSK+SNSDVIIYVGCGERGNEMSE
Sbjct: 225  LLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSE 284

Query: 722  VLQDFPQLTVEIDGRNESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSM 901
            VL+DFPQL++EIDG  ESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSM
Sbjct: 285  VLRDFPQLSLEIDGVTESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSM 344

Query: 902  MADSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVT 1081
            MADSTSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G PD R+GSV+
Sbjct: 345  MADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPD-REGSVS 403

Query: 1082 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFY 1261
            IVGAVSPPGGDFSDPVT+ATLGIVQVFWGLDKKLAQRKHFPSINWLIS+SKY RALDDFY
Sbjct: 404  IVGAVSPPGGDFSDPVTTATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFY 463

Query: 1262 DKHYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGY 1441
            DK++ EFV LRTK  EILQEEEDLSEIVQLVGK SLAE+DKITLEVA+L+KDDFLQQN Y
Sbjct: 464  DKNFPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSY 523

Query: 1442 SSYDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSMK 1621
            S YD+FCPFYKTVGMLKNMI FYD +RHAVE+T+QS++KITW++IR++M + +Y++SSMK
Sbjct: 524  SPYDRFCPFYKTVGMLKNMIAFYDMSRHAVESTAQSENKITWNVIRDSMGNILYQLSSMK 583

Query: 1622 FKDPVKDGKEKILHDFDELYEEISNGFRNLED 1717
            FKDPVKDG+ KI  DF++L+E+I   FRNLED
Sbjct: 584  FKDPVKDGEAKIKADFEQLHEDIQQAFRNLED 615

>sp|Q27331|VATA2_DROME Vacuolar ATP synthase catalytic subunit A isoform 2 (V-ATPase A
            subunit 2) (Vacuolar proton pump alpha subunit 2)
            (V-ATPase 69 kDa subunit 2)
          Length = 614

 Score =  915 bits (2365), Expect = 0.0
 Identities = 450/572 (78%), Positives = 513/572 (89%)
 Frame = +2

Query: 2    GYGKLVGEIIRLEGDFATIQVYEDTSGVTVGDPVIKTGKPLSVELGPGIMDSIFDGIQRP 181
            GY +LVGEIIRLEGD ATIQVYE+TSGVTVGDPV++TGKPLSVELGPGIM SIFDGIQRP
Sbjct: 44   GYYELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRP 103

Query: 182  LKFIASQSKSIYIPRGVNVPALNRSIKWDFQPVNVSSGMHVSGGDVFGIVQENTLVKHKI 361
            LK I   ++SIYIP+GVNVP+L+R   W+F P+NV  G H++GGD++G+V ENTLVKHK+
Sbjct: 104  LKDINELTESIYIPKGVNVPSLSRVASWEFNPLNVKVGSHITGGDLYGLVHENTLVKHKM 163

Query: 362  MVHPKEKGIVKWIAPRGNYTVDETVLITEFNKVQTKHTMXXXXXXXXXXXXADKLPANYP 541
            +V+P+ KG V++IAP GNY VD+ VL TEF+   TKHTM             +KLPAN+P
Sbjct: 164  IVNPRAKGTVRYIAPSGNYKVDDVVLETEFDGEITKHTMLQVWPVRHHAPVTEKLPANHP 223

Query: 542  LLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKFSNSDVIIYVGCGERGNEMSE 721
            LLTGQRVLD+LFPCVQGGTTAIPGAFGCGKTVISQ+LSK+SNSDVIIYVGCGERGNEMSE
Sbjct: 224  LLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMSE 283

Query: 722  VLQDFPQLTVEIDGRNESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSM 901
            VL+DFP+L+VEIDG  ESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSM
Sbjct: 284  VLRDFPELSVEIDGVTESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSM 343

Query: 902  MADSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVT 1081
            MADSTSRWAEALREISGRLAEMP +SGYPAYLGARLASFYERAGRV+C+G P ER+GSV+
Sbjct: 344  MADSTSRWAEALREISGRLAEMPRDSGYPAYLGARLASFYERAGRVKCLGNP-EREGSVS 402

Query: 1082 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFY 1261
            IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLIS+SKY RALDDFY
Sbjct: 403  IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFY 462

Query: 1262 DKHYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGY 1441
            DK++ EFV LRTK  EILQEEEDLSEIVQLVGK SLAE+DKITLEVA+L+KDDFLQQN Y
Sbjct: 463  DKNFPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSY 522

Query: 1442 SSYDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSMK 1621
            SSYD+FCPFYKTVGML+N+I FYD ARH+VE+T+QS++KITW++IREAM + +Y++SSMK
Sbjct: 523  SSYDRFCPFYKTVGMLRNIIDFYDMARHSVESTAQSENKITWNVIREAMGNIMYQLSSMK 582

Query: 1622 FKDPVKDGKEKILHDFDELYEEISNGFRNLED 1717
            FKDPVKDG+ KI  DF++L+E++   FRNLED
Sbjct: 583  FKDPVKDGEAKIKADFEQLHEDLQQAFRNLED 614

>sp|P31400|VATA_MANSE Vacuolar ATP synthase catalytic subunit A (V-ATPase A subunit)
            (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa
            subunit)
          Length = 617

 Score =  910 bits (2353), Expect = 0.0
 Identities = 447/572 (78%), Positives = 511/572 (89%)
 Frame = +2

Query: 2    GYGKLVGEIIRLEGDFATIQVYEDTSGVTVGDPVIKTGKPLSVELGPGIMDSIFDGIQRP 181
            GY +LVGEIIRLEGD ATIQVYE+TSGVTVGDPV++TGKPLSVELGPGI+ SIFDGIQRP
Sbjct: 47   GYNELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRP 106

Query: 182  LKFIASQSKSIYIPRGVNVPALNRSIKWDFQPVNVSSGMHVSGGDVFGIVQENTLVKHKI 361
            LK I   ++SIYIP+GVNVP+L R + W+F P+NV  G H++GGD++GIV ENTLVKHK+
Sbjct: 107  LKDINELTQSIYIPKGVNVPSLAREVDWEFNPLNVKVGSHITGGDLYGIVHENTLVKHKM 166

Query: 362  MVHPKEKGIVKWIAPRGNYTVDETVLITEFNKVQTKHTMXXXXXXXXXXXXADKLPANYP 541
            ++ P+ KG V +IAP GNY V + VL TEF+  + ++TM             +KLPAN+P
Sbjct: 167  LMPPRAKGTVTYIAPAGNYKVTDVVLETEFDGEKAQYTMLQVWPVRQPRPVTEKLPANHP 226

Query: 542  LLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKFSNSDVIIYVGCGERGNEMSE 721
            LLTGQRVLD+LFPCVQGGTTAIPGAFGCGKTVISQ+LSK+SNSDVIIYVGCGERGNEMSE
Sbjct: 227  LLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMSE 286

Query: 722  VLQDFPQLTVEIDGRNESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSM 901
            VL+DFP+LTVEI+G  ESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSM
Sbjct: 287  VLRDFPELTVEIEGVTESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSM 346

Query: 902  MADSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVT 1081
            MADSTSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G PD R+GSV+
Sbjct: 347  MADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPD-REGSVS 405

Query: 1082 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFY 1261
            IVGAVSPPGGDFSDPVT+ATLGIVQVFWGLDKKLAQRKHFPSINWLIS+SKY RALDDFY
Sbjct: 406  IVGAVSPPGGDFSDPVTAATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFY 465

Query: 1262 DKHYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGY 1441
            +K+Y EFV LRTK  EILQEEEDLSEIVQLVGK SLAE+DKITLEVA+L+KDDFLQQN Y
Sbjct: 466  EKNYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSY 525

Query: 1442 SSYDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSMK 1621
            SSYD+FCPFYKTVGMLKN+I FYD +RHAVE+T+QSD+K+TW++IR+AM + +Y++SSMK
Sbjct: 526  SSYDRFCPFYKTVGMLKNIISFYDMSRHAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMK 585

Query: 1622 FKDPVKDGKEKILHDFDELYEEISNGFRNLED 1717
            FKDPVKDG+ KI  DFD+L E++S  FRNLED
Sbjct: 586  FKDPVKDGEAKIKADFDQLLEDMSAAFRNLED 617

>sp|P38606|VATA1_HUMAN Vacuolar ATP synthase catalytic subunit A, ubiquitous isoform
            (V-ATPase A subunit 1) (Vacuolar proton pump alpha
            subunit 1) (V-ATPase 69 kDa subunit 1) (Isoform VA68)
          Length = 617

 Score =  904 bits (2337), Expect = 0.0
 Identities = 447/573 (78%), Positives = 507/573 (88%), Gaps = 1/573 (0%)
 Frame = +2

Query: 2    GYGKLVGEIIRLEGDFATIQVYEDTSGVTVGDPVIKTGKPLSVELGPGIMDSIFDGIQRP 181
            G+ +LVGEIIRLEGD ATIQVYE+TSGV+VGDPV++TGKPLSVELGPGIM +IFDGIQRP
Sbjct: 46   GHSELVGEIIRLEGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRP 105

Query: 182  LKFIASQSKSIYIPRGVNVPALNRSIKWDFQPV-NVSSGMHVSGGDVFGIVQENTLVKHK 358
            L  I+SQ++SIYIPRGVNV AL+R IKWDF P  N+  G H++GGD++GIV EN+L+KHK
Sbjct: 106  LSDISSQTQSIYIPRGVNVSALSRDIKWDFTPCKNLRVGSHITGGDIYGIVSENSLIKHK 165

Query: 359  IMVHPKEKGIVKWIAPRGNYTVDETVLITEFNKVQTKHTMXXXXXXXXXXXXADKLPANY 538
            IM+ P+ +G V +IAP GNY   + VL  EF  V+ K TM             +KLPAN+
Sbjct: 166  IMLPPRNRGTVTYIAPPGNYDTSDVVLELEFEGVKEKFTMVQVWPVRQVRPVTEKLPANH 225

Query: 539  PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKFSNSDVIIYVGCGERGNEMS 718
            PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSK+SNSDVIIYVGCGERGNEMS
Sbjct: 226  PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMS 285

Query: 719  EVLQDFPQLTVEIDGRNESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVS 898
            EVL+DFP+LT+E+DG+ ESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGY+VS
Sbjct: 286  EVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVS 345

Query: 899  MMADSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSV 1078
            MMADSTSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G P ER+GSV
Sbjct: 346  MMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNP-EREGSV 404

Query: 1079 TIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDF 1258
            +IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPS+NWLIS+SKY RALD++
Sbjct: 405  SIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEY 464

Query: 1259 YDKHYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNG 1438
            YDKH+ EFV LRTK  EILQEEEDL+EIVQLVGK SLAE+DKITLEVA+LIKDDFLQQNG
Sbjct: 465  YDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNG 524

Query: 1439 YSSYDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSM 1618
            Y+ YD+FCPFYKTVGML NMI FYD AR AVETT+QSD+KITWS+IRE M D +YK+SSM
Sbjct: 525  YTPYDRFCPFYKTVGMLSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSM 584

Query: 1619 KFKDPVKDGKEKILHDFDELYEEISNGFRNLED 1717
            KFKDP+KDG+ KI  D+ +L E++ N FR+LED
Sbjct: 585  KFKDPLKDGEAKIKSDYAQLLEDMQNAFRSLED 617

>sp|P31404|VATA1_BOVIN Vacuolar ATP synthase catalytic subunit A, ubiquitous isoform
            (V-ATPase A subunit 1) (Vacuolar proton pump alpha
            subunit 1) (V-ATPase 69 kDa subunit 1)
          Length = 617

 Score =  898 bits (2320), Expect = 0.0
 Identities = 443/573 (77%), Positives = 506/573 (88%), Gaps = 1/573 (0%)
 Frame = +2

Query: 2    GYGKLVGEIIRLEGDFATIQVYEDTSGVTVGDPVIKTGKPLSVELGPGIMDSIFDGIQRP 181
            G+ +LVGEIIRLEGD ATIQVYE+TSGV+VGDPV++TGKPLSVEL PGIM +IFDGIQRP
Sbjct: 46   GHSELVGEIIRLEGDMATIQVYEETSGVSVGDPVLRTGKPLSVELCPGIMGAIFDGIQRP 105

Query: 182  LKFIASQSKSIYIPRGVNVPALNRSIKWDFQPV-NVSSGMHVSGGDVFGIVQENTLVKHK 358
            L  I+SQ++SIYIPRGVNV AL+R +KWDF P  N+  G H++GGD++GIV EN+L+KHK
Sbjct: 106  LSDISSQTQSIYIPRGVNVSALSRDVKWDFTPCKNLRVGSHITGGDIYGIVNENSLIKHK 165

Query: 359  IMVHPKEKGIVKWIAPRGNYTVDETVLITEFNKVQTKHTMXXXXXXXXXXXXADKLPANY 538
            IM+ P+ +G V +IAP GNY   + VL  EF  ++ K +M             +KLPAN+
Sbjct: 166  IMLPPRNRGTVTYIAPPGNYDTSDVVLELEFEGIKEKFSMVQVWPVRQVRPVTEKLPANH 225

Query: 539  PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKFSNSDVIIYVGCGERGNEMS 718
            PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSK+SNSDVIIYVGCGERGNEMS
Sbjct: 226  PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMS 285

Query: 719  EVLQDFPQLTVEIDGRNESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVS 898
            EVL+DFP+LT+E+DG+ ESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGY+VS
Sbjct: 286  EVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVS 345

Query: 899  MMADSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSV 1078
            MMADSTSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G P ER+GSV
Sbjct: 346  MMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNP-EREGSV 404

Query: 1079 TIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDF 1258
            +IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPS+NWLIS+SKY RALD++
Sbjct: 405  SIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEY 464

Query: 1259 YDKHYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNG 1438
            YDKH+ EFV LRTK  EILQEEEDL+EIVQLVGK SLAE+DKITLEVA+LIKDDFLQQNG
Sbjct: 465  YDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNG 524

Query: 1439 YSSYDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSM 1618
            Y+ YD+FCPFYKTVGML NMI FYD AR AVETT+QSD+KITWS+IRE M + +YK+SSM
Sbjct: 525  YTPYDRFCPFYKTVGMLSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGEILYKLSSM 584

Query: 1619 KFKDPVKDGKEKILHDFDELYEEISNGFRNLED 1717
            KFKDPVKDG+ KI  D+ +L E++ N FR+LED
Sbjct: 585  KFKDPVKDGEAKIKADYAQLLEDMQNAFRSLED 617

>sp|P48602|VATA1_DROME Vacuolar ATP synthase catalytic subunit A isoform 1 (V-ATPase A
            subunit 1) (Vacuolar proton pump alpha subunit 1)
            (V-ATPase 69 kDa subunit 1)
          Length = 614

 Score =  895 bits (2314), Expect = 0.0
 Identities = 439/572 (76%), Positives = 505/572 (88%)
 Frame = +2

Query: 2    GYGKLVGEIIRLEGDFATIQVYEDTSGVTVGDPVIKTGKPLSVELGPGIMDSIFDGIQRP 181
            GY +LVGEIIRLEGD ATIQVYE+TSGVTVGDPV++TGKPLSVELGPGIM SIFDGIQRP
Sbjct: 44   GYYELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRP 103

Query: 182  LKFIASQSKSIYIPRGVNVPALNRSIKWDFQPVNVSSGMHVSGGDVFGIVQENTLVKHKI 361
            L+ I   + SIYIP+GVN  AL+RS  W+F P+NV  G H++GGD++G+V ENTLVK ++
Sbjct: 104  LRDIGVMTNSIYIPKGVNTTALSRSEMWEFNPLNVRVGSHITGGDLYGVVHENTLVKQRM 163

Query: 362  MVHPKEKGIVKWIAPRGNYTVDETVLITEFNKVQTKHTMXXXXXXXXXXXXADKLPANYP 541
            +V P+ KG V++IAP GNY +++ VL TEF+   TKHTM             +KLPAN+P
Sbjct: 164  IVAPRAKGTVRYIAPAGNYNLEDIVLETEFDGEITKHTMLQVWPVRQPRPVTEKLPANHP 223

Query: 542  LLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKFSNSDVIIYVGCGERGNEMSE 721
            L TGQRVLD+LFPCVQGGTTAIPGAFGCGKTVISQ+LSK+SNSDVIIYVGCGERGNEMSE
Sbjct: 224  LFTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMSE 283

Query: 722  VLQDFPQLTVEIDGRNESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSM 901
            VL+DFP+LT EIDG  ESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNV+M
Sbjct: 284  VLRDFPELTCEIDGVTESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVAM 343

Query: 902  MADSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVT 1081
            MADSTSRWAEALREISGRLAEMPA+SGYPAYLGARLA+FYERAGRV+C+G P ER+GSV+
Sbjct: 344  MADSTSRWAEALREISGRLAEMPADSGYPAYLGARLATFYERAGRVKCLGNP-EREGSVS 402

Query: 1082 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFY 1261
            IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLIS+SKY RALD++Y
Sbjct: 403  IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDEYY 462

Query: 1262 DKHYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGY 1441
            DK+Y EFV LRTK  EILQEEEDLSEIVQLVGK SLAE+DK+TLEVA+L+KDDFLQQN Y
Sbjct: 463  DKNYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKVTLEVAKLLKDDFLQQNSY 522

Query: 1442 SSYDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSMK 1621
            S YD+ CPFYKTVGML+N++ FY+ ARHAVE+T+QSD+KITW+ IRE+M   +Y++SSMK
Sbjct: 523  SPYDRVCPFYKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRESMGGIMYQLSSMK 582

Query: 1622 FKDPVKDGKEKILHDFDELYEEISNGFRNLED 1717
            FKDPVKDG++KI  D+D+LYE++   FRNLED
Sbjct: 583  FKDPVKDGEQKIKADYDQLYEDLQQAFRNLED 614

>sp|Q29048|VATA1_PIG Vacuolar ATP synthase catalytic subunit A, ubiquitous isoform
            (V-ATPase A subunit 1) (Vacuolar proton pump alpha
            subunit 1) (V-ATPase 69 kDa subunit 1)
          Length = 617

 Score =  895 bits (2312), Expect = 0.0
 Identities = 442/573 (77%), Positives = 506/573 (88%), Gaps = 1/573 (0%)
 Frame = +2

Query: 2    GYGKLVGEIIRLEGDFATIQVYEDTSGVTVGDPVIKTGKPLSVELGPGIMDSIFDGIQRP 181
            G+ +LVGEIIRLEGD ATIQVYE+TSGV+VGDPV++TGKPLSVELGPGIM +IFDGIQRP
Sbjct: 46   GHSELVGEIIRLEGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRP 105

Query: 182  LKFIASQSKSIYIPRGVNVPALNRSIKWDFQPV-NVSSGMHVSGGDVFGIVQENTLVKHK 358
            L  I+SQ++SIYIPRGVNV AL+R +KW+F P  N+  G H++GGD++GIV EN+L+KH+
Sbjct: 106  LSDISSQTQSIYIPRGVNVSALSRDVKWEFTPSKNLRVGSHITGGDIYGIVNENSLIKHR 165

Query: 359  IMVHPKEKGIVKWIAPRGNYTVDETVLITEFNKVQTKHTMXXXXXXXXXXXXADKLPANY 538
            IM+ P+ +G V +IAP GNY   + VL  EF  V+ K +M             +KLPAN+
Sbjct: 166  IMLPPRNRGTVTYIAPPGNYDTSDVVLELEFEGVKEKFSMVQVWPVRQVRPVTEKLPANH 225

Query: 539  PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKFSNSDVIIYVGCGERGNEMS 718
            PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSK+SNSDVIIYVGCGER NEMS
Sbjct: 226  PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERVNEMS 285

Query: 719  EVLQDFPQLTVEIDGRNESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVS 898
            EVL+DFP+LT+E+DG+ ESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGY+VS
Sbjct: 286  EVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVS 345

Query: 899  MMADSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSV 1078
            MMA+STSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G P ER+GSV
Sbjct: 346  MMANSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNP-EREGSV 404

Query: 1079 TIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDF 1258
            TIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPS+NWLIS+SKY RALD++
Sbjct: 405  TIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEY 464

Query: 1259 YDKHYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNG 1438
            YDKH+ EFV LRTK  EILQEEEDL+EIVQLVGK SLAE+DKITLEVA+LIKDDFLQQNG
Sbjct: 465  YDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNG 524

Query: 1439 YSSYDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSM 1618
            Y+ YD+FCPFYKTVGML NMI FYD AR AVETT+QSD+KITWS+IRE M + +YK+SSM
Sbjct: 525  YTPYDRFCPFYKTVGMLSNMIAFYDLARRAVETTAQSDNKITWSIIREHMGEILYKLSSM 584

Query: 1619 KFKDPVKDGKEKILHDFDELYEEISNGFRNLED 1717
            KFKDPVKDG+ KI  D+ +L E++ N FR+LED
Sbjct: 585  KFKDPVKDGEAKIKADYAQLLEDVQNAFRSLED 617

>sp|P50516|VATA1_MOUSE Vacuolar ATP synthase catalytic subunit A, ubiquitous isoform
            (V-ATPase A subunit 1) (Vacuolar proton pump alpha
            subunit 1) (V-ATPase 69 kDa subunit 1)
          Length = 617

 Score =  894 bits (2310), Expect = 0.0
 Identities = 443/573 (77%), Positives = 504/573 (87%), Gaps = 1/573 (0%)
 Frame = +2

Query: 2    GYGKLVGEIIRLEGDFATIQVYEDTSGVTVGDPVIKTGKPLSVELGPGIMDSIFDGIQRP 181
            G+ +LVGEIIRLEGD ATIQVYE+TSGV+VGDPV++TGKP SVELGPGIM +IFDGIQRP
Sbjct: 46   GHSELVGEIIRLEGDMATIQVYEETSGVSVGDPVLRTGKPRSVELGPGIMGAIFDGIQRP 105

Query: 182  LKFIASQSKSIYIPRGVNVPALNRSIKWDFQPV-NVSSGMHVSGGDVFGIVQENTLVKHK 358
            L  I+SQ++SIYIPRGVNV AL+R IKW+F P  N+  G H++GGD++GIV EN+L+KHK
Sbjct: 106  LSDISSQTQSIYIPRGVNVSALSRDIKWEFIPSKNLRVGSHITGGDIYGIVNENSLIKHK 165

Query: 359  IMVHPKEKGIVKWIAPRGNYTVDETVLITEFNKVQTKHTMXXXXXXXXXXXXADKLPANY 538
            IM+ P+ +G V +IAP GNY     VL  EF  V+ K +M             +KLPAN+
Sbjct: 166  IMLPPRNRGSVTYIAPPGNYDASNVVLELEFEGVKEKFSMVQVWPVRQVRPVTEKLPANH 225

Query: 539  PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKFSNSDVIIYVGCGERGNEMS 718
            PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSK+SNSDVIIYVGCGERGNEMS
Sbjct: 226  PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMS 285

Query: 719  EVLQDFPQLTVEIDGRNESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVS 898
            EVL+DFP+LT+E+DG+ ESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGY+VS
Sbjct: 286  EVLRDFPELTMEVDGKAESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVS 345

Query: 899  MMADSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSV 1078
            MMADSTSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G P ER+GSV
Sbjct: 346  MMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNP-EREGSV 404

Query: 1079 TIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDF 1258
            +IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPS+NWLIS+SKY RALD++
Sbjct: 405  SIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEY 464

Query: 1259 YDKHYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNG 1438
            YDKH+ EFV LRTK  EILQEE DL+EIVQLVGK SLAE+DKITLEVA+LIKDDFLQQNG
Sbjct: 465  YDKHFTEFVPLRTKAKEILQEEGDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNG 524

Query: 1439 YSSYDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSM 1618
            Y+ YD+FCPFYKTVGML NMI FYD AR AVETT+QSD+KITWS+IRE M + +YK+SSM
Sbjct: 525  YTPYDRFCPFYKTVGMLSNMISFYDMARRAVETTAQSDNKITWSIIREHMGEILYKLSSM 584

Query: 1619 KFKDPVKDGKEKILHDFDELYEEISNGFRNLED 1717
            KFKDPVKDG+ KI  D+ +L E++ N FR+LED
Sbjct: 585  KFKDPVKDGEAKIKADYAQLLEDMQNAFRSLED 617

>sp|O16109|VATA_AEDAE Vacuolar ATP synthase catalytic subunit A (V-ATPase A subunit)
            (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa
            subunit)
          Length = 615

 Score =  857 bits (2214), Expect = 0.0
 Identities = 435/574 (75%), Positives = 493/574 (85%), Gaps = 2/574 (0%)
 Frame = +2

Query: 2    GYGKLVGEIIRLEGDFATIQVYEDTSGVTVGDPVIKTGKPLSVELGPGIMDSIFDGIQRP 181
            GY +LVGEIIRLEGD ATIQVYE+TSGVTVGDPV++TGKPLSVELGPGIM SIFDGIQRP
Sbjct: 44   GYYELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRP 103

Query: 182  LKFIASQSKSIYIPRGVNVPALNRSIKWDFQPVNVSS-GMHVSGGDVFGIVQENTLVKHK 358
            LK I   + SIYIP G     L    +   QP+     G H++G D++G+V ENTLVKHK
Sbjct: 104  LKDINELTSSIYIPEGCEHSLLVPYRRLGIQPLERKGLGSHITGRDLYGLVHENTLVKHK 163

Query: 359  IMVHPKEKGIVKWIAPRGNYTVDETVLITEFNKVQTKHTMXXXXXXXXXXXXADKLPANY 538
            ++V P+ KG V++IAP GNYTVD+ +L TEF+    K +M             +KLPAN+
Sbjct: 164  LLVPPRAKGTVRYIAPPGNYTVDDIILETEFDGEINKWSMLQVWPVRQPRPVTEKLPANH 223

Query: 539  PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKFSNSDVIIYVGCGERGNEMS 718
            PLLTGQRVLD+LFPCVQGGTTAIPGAFGCGKTVISQ+LSK+SNSDVIIYVGCGERGNEMS
Sbjct: 224  PLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMS 283

Query: 719  EVLQDFPQLTVEIDGRNESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVS 898
            EVL+DFP+L+VEIDG  ESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVS
Sbjct: 284  EVLRDFPELSVEIDGVTESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVS 343

Query: 899  MMADSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSV 1078
            MMADSTSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G P ER+GSV
Sbjct: 344  MMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNP-EREGSV 402

Query: 1079 TIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDF 1258
            +IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLIS+SKY RALDDF
Sbjct: 403  SIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDF 462

Query: 1259 YDKHYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNG 1438
            YDK++ EFV    K  EILQEEEDLSEIVQLVGK SLAE+DKITLEVA+L+KDDFLQQN 
Sbjct: 463  YDKNFQEFVPTAYKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNS 522

Query: 1439 YSSYDKFCPFYKTVG-MLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISS 1615
            YS+YD+FCPFYKTVG ML+NMI FYD ARHAVETT+QS++KITW++IR++M + +Y++SS
Sbjct: 523  YSAYDRFCPFYKTVGRMLRNMIGFYDMARHAVETTAQSENKITWNVIRDSMGNILYQLSS 582

Query: 1616 MKFKDPVKDGKEKILHDFDELYEEISNGFRNLED 1717
            MKFKDP +  K KI  DFD+LYE++   FRNLED
Sbjct: 583  MKFKDPGRMAK-KIKADFDQLYEDLQQAFRNLED 615

>sp|P13548|VATA_PHAAU Vacuolar ATP synthase catalytic subunit A (V-ATPase A subunit)
            (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa
            subunit) (VAA3-1)
          Length = 623

 Score =  767 bits (1980), Expect = 0.0
 Identities = 382/574 (66%), Positives = 465/574 (81%), Gaps = 2/574 (0%)
 Frame = +2

Query: 2    GYGKLVGEIIRLEGDFATIQVYEDTSGVTVGDPVIKTGKPLSVELGPGIMDSIFDGIQRP 181
            G   L+GEIIRLEGD ATIQVYE+T+G+ V DPV++T KPLSVELGPGI+ +IFDGIQRP
Sbjct: 49   GRDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRP 108

Query: 182  LKFIASQSKSIYIPRGVNVPALNRSIKWDFQPVNVSSGMHVSGGDVFGIVQENTLVKHKI 361
            LK IA +S  +YIPRGV+VPAL++   W+FQP  +  G  ++GGD++  V ENTL++H I
Sbjct: 109  LKTIAKRSGDVYIPRGVSVPALDKDTLWEFQPKKIGEGDLLTGGDLYATVFENTLMQHHI 168

Query: 362  MVHPKEKGIVKWIAPRGNYTVDETVLITEFNKVQTKHTMXXXXXXXXXXXXADKLPANYP 541
             + P   G + +IAP G Y++ +TVL  EF  V+ K TM            A KL A+ P
Sbjct: 169  ALPPDAMGKITYIAPPGQYSITDTVLELEFQGVKKKFTMLQTWPVRTPRPVASKLAADTP 228

Query: 542  LLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKFSNSDVIIYVGCGERGNEMSE 721
            LLTGQRVLDALFP V GGT AIPGAFGCGKTVISQ+LSK+SNSD ++YVGCGERGNEM+E
Sbjct: 229  LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDAVVYVGCGERGNEMAE 288

Query: 722  VLQDFPQLTVEI-DGRNESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVS 898
            VL DFPQLT+ + DGR ES+MKRT LVANTSNMPVAAREASIYTGITL+EYFRDMGYNVS
Sbjct: 289  VLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGYNVS 348

Query: 899  MMADSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSV 1078
            MMADSTSRWAEALREISGRLAEMPA+SGYPAYL ARLASFYER G+V+C+GGP ER GSV
Sbjct: 349  MMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERPGKVKCLGGP-ERTGSV 407

Query: 1079 TIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDF 1258
            TIVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLIS+SKY+ AL+ F
Sbjct: 408  TIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESF 467

Query: 1259 YDKHYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNG 1438
            Y++   +F+ +RTK  E+LQ E+DL+EIVQLVGK +LAE DKITLE A+L+++D+L QN 
Sbjct: 468  YEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNA 527

Query: 1439 YSSYDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSD-SKITWSMIREAMNDTIYKISS 1615
            ++ YDKFCPFYK+V M++N+IHFY+ A  AVE  + SD  KIT+S+I+  + D  Y++ S
Sbjct: 528  FTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGSDGQKITYSLIKHRVGDLFYRLVS 587

Query: 1616 MKFKDPVKDGKEKILHDFDELYEEISNGFRNLED 1717
             KF+DP  +G+  ++  F +L+E++S GFRNLED
Sbjct: 588  QKFEDPA-EGEAALVGQFQKLHEDLSTGFRNLED 620

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 217,279,082
Number of Sequences: 369166
Number of extensions: 4881309
Number of successful extensions: 15302
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14405
length of database: 68,354,980
effective HSP length: 116
effective length of database: 46,925,720
effective search space used: 22008162680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00478

  1. Dr_sW_012_L10
  2. Dr_sW_021_A03
  3. Dr_sW_024_P18
  4. Dr_sW_024_H19
  5. Dr_sW_016_O08
  6. Dr_sW_008_J16
  7. Dr_sW_003_P12
  8. Dr_sW_021_L01