Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_003_P12
(852 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P38606|VATA1_HUMAN Vacuolar ATP synthase catalytic subun... 456 e-128
sp|P38607|VATA2_HUMAN Vacuolar ATP synthase catalytic subun... 456 e-128
sp|P31404|VATA1_BOVIN Vacuolar ATP synthase catalytic subun... 455 e-128
sp|Q29048|VATA1_PIG Vacuolar ATP synthase catalytic subunit... 455 e-128
sp|P31400|VATA_MANSE Vacuolar ATP synthase catalytic subuni... 454 e-127
sp|P50516|VATA1_MOUSE Vacuolar ATP synthase catalytic subun... 453 e-127
sp|Q27331|VATA2_DROME Vacuolar ATP synthase catalytic subun... 450 e-126
sp|P48602|VATA1_DROME Vacuolar ATP synthase catalytic subun... 450 e-126
sp|O16109|VATA_AEDAE Vacuolar ATP synthase catalytic subuni... 434 e-121
sp|P49087|VATA_MAIZE Vacuolar ATP synthase catalytic subuni... 379 e-105
>sp|P38606|VATA1_HUMAN Vacuolar ATP synthase catalytic subunit A, ubiquitous isoform
(V-ATPase A subunit 1) (Vacuolar proton pump alpha
subunit 1) (V-ATPase 69 kDa subunit 1) (Isoform VA68)
Length = 617
Score = 456 bits (1173), Expect = e-128
Identities = 221/270 (81%), Positives = 248/270 (91%)
Frame = +3
Query: 3 DSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVTIV 182
DSTSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G P ER+GSV+IV
Sbjct: 349 DSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNP-EREGSVSIV 407
Query: 183 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFYDK 362
GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPS+NWLIS+SKY RALD++YDK
Sbjct: 408 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDK 467
Query: 363 HYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGYSP 542
H+ EFV LRTK EILQEEEDL+EIVQLVGK SLAE+DKITLEVA+LIKDDFLQQNGY+P
Sbjct: 468 HFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTP 527
Query: 543 YDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSMKFK 722
YD+FCPFYKTVGML NMI FYD AR AVETT+QSD+KITWS+IRE M D +YK+SSMKFK
Sbjct: 528 YDRFCPFYKTVGMLSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFK 587
Query: 723 DPVKDGKEKILHDFDELYEEISNGFRNLED 812
DP+KDG+ KI D+ +L E++ N FR+LED
Sbjct: 588 DPLKDGEAKIKSDYAQLLEDMQNAFRSLED 617
>sp|P38607|VATA2_HUMAN Vacuolar ATP synthase catalytic subunit A, osteoclast isoform
(V-ATPase A subunit 2) (Vacuolar proton pump alpha
subunit 2) (V-ATPase 69 kDa subunit 2) (Isoform HO68)
Length = 615
Score = 456 bits (1172), Expect = e-128
Identities = 220/270 (81%), Positives = 251/270 (92%)
Frame = +3
Query: 3 DSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVTIV 182
DSTSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G PD R+GSV+IV
Sbjct: 347 DSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPD-REGSVSIV 405
Query: 183 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFYDK 362
GAVSPPGGDFSDPVT+ATLGIVQVFWGLDKKLAQRKHFPSINWLIS+SKY RALDDFYDK
Sbjct: 406 GAVSPPGGDFSDPVTTATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYDK 465
Query: 363 HYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGYSP 542
++ EFV LRTK EILQEEEDLSEIVQLVGK SLAE+DKITLEVA+L+KDDFLQQN YSP
Sbjct: 466 NFPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSP 525
Query: 543 YDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSMKFK 722
YD+FCPFYKTVGMLKNMI FYD +RHAVE+T+QS++KITW++IR++M + +Y++SSMKFK
Sbjct: 526 YDRFCPFYKTVGMLKNMIAFYDMSRHAVESTAQSENKITWNVIRDSMGNILYQLSSMKFK 585
Query: 723 DPVKDGKEKILHDFDELYEEISNGFRNLED 812
DPVKDG+ KI DF++L+E+I FRNLED
Sbjct: 586 DPVKDGEAKIKADFEQLHEDIQQAFRNLED 615
>sp|P31404|VATA1_BOVIN Vacuolar ATP synthase catalytic subunit A, ubiquitous isoform
(V-ATPase A subunit 1) (Vacuolar proton pump alpha
subunit 1) (V-ATPase 69 kDa subunit 1)
Length = 617
Score = 455 bits (1171), Expect = e-128
Identities = 221/270 (81%), Positives = 248/270 (91%)
Frame = +3
Query: 3 DSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVTIV 182
DSTSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G P ER+GSV+IV
Sbjct: 349 DSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNP-EREGSVSIV 407
Query: 183 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFYDK 362
GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPS+NWLIS+SKY RALD++YDK
Sbjct: 408 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDK 467
Query: 363 HYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGYSP 542
H+ EFV LRTK EILQEEEDL+EIVQLVGK SLAE+DKITLEVA+LIKDDFLQQNGY+P
Sbjct: 468 HFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTP 527
Query: 543 YDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSMKFK 722
YD+FCPFYKTVGML NMI FYD AR AVETT+QSD+KITWS+IRE M + +YK+SSMKFK
Sbjct: 528 YDRFCPFYKTVGMLSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGEILYKLSSMKFK 587
Query: 723 DPVKDGKEKILHDFDELYEEISNGFRNLED 812
DPVKDG+ KI D+ +L E++ N FR+LED
Sbjct: 588 DPVKDGEAKIKADYAQLLEDMQNAFRSLED 617
>sp|Q29048|VATA1_PIG Vacuolar ATP synthase catalytic subunit A, ubiquitous isoform
(V-ATPase A subunit 1) (Vacuolar proton pump alpha
subunit 1) (V-ATPase 69 kDa subunit 1)
Length = 617
Score = 455 bits (1170), Expect = e-128
Identities = 221/270 (81%), Positives = 248/270 (91%)
Frame = +3
Query: 3 DSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVTIV 182
+STSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G P ER+GSVTIV
Sbjct: 349 NSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNP-EREGSVTIV 407
Query: 183 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFYDK 362
GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPS+NWLIS+SKY RALD++YDK
Sbjct: 408 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDK 467
Query: 363 HYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGYSP 542
H+ EFV LRTK EILQEEEDL+EIVQLVGK SLAE+DKITLEVA+LIKDDFLQQNGY+P
Sbjct: 468 HFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTP 527
Query: 543 YDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSMKFK 722
YD+FCPFYKTVGML NMI FYD AR AVETT+QSD+KITWS+IRE M + +YK+SSMKFK
Sbjct: 528 YDRFCPFYKTVGMLSNMIAFYDLARRAVETTAQSDNKITWSIIREHMGEILYKLSSMKFK 587
Query: 723 DPVKDGKEKILHDFDELYEEISNGFRNLED 812
DPVKDG+ KI D+ +L E++ N FR+LED
Sbjct: 588 DPVKDGEAKIKADYAQLLEDVQNAFRSLED 617
>sp|P31400|VATA_MANSE Vacuolar ATP synthase catalytic subunit A (V-ATPase A subunit)
(Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa
subunit)
Length = 617
Score = 454 bits (1168), Expect = e-127
Identities = 220/270 (81%), Positives = 250/270 (92%)
Frame = +3
Query: 3 DSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVTIV 182
DSTSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G PD R+GSV+IV
Sbjct: 349 DSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPD-REGSVSIV 407
Query: 183 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFYDK 362
GAVSPPGGDFSDPVT+ATLGIVQVFWGLDKKLAQRKHFPSINWLIS+SKY RALDDFY+K
Sbjct: 408 GAVSPPGGDFSDPVTAATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYEK 467
Query: 363 HYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGYSP 542
+Y EFV LRTK EILQEEEDLSEIVQLVGK SLAE+DKITLEVA+L+KDDFLQQN YS
Sbjct: 468 NYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSS 527
Query: 543 YDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSMKFK 722
YD+FCPFYKTVGMLKN+I FYD +RHAVE+T+QSD+K+TW++IR+AM + +Y++SSMKFK
Sbjct: 528 YDRFCPFYKTVGMLKNIISFYDMSRHAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFK 587
Query: 723 DPVKDGKEKILHDFDELYEEISNGFRNLED 812
DPVKDG+ KI DFD+L E++S FRNLED
Sbjct: 588 DPVKDGEAKIKADFDQLLEDMSAAFRNLED 617
>sp|P50516|VATA1_MOUSE Vacuolar ATP synthase catalytic subunit A, ubiquitous isoform
(V-ATPase A subunit 1) (Vacuolar proton pump alpha
subunit 1) (V-ATPase 69 kDa subunit 1)
Length = 617
Score = 453 bits (1165), Expect = e-127
Identities = 220/270 (81%), Positives = 247/270 (91%)
Frame = +3
Query: 3 DSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVTIV 182
DSTSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G P ER+GSV+IV
Sbjct: 349 DSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNP-EREGSVSIV 407
Query: 183 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFYDK 362
GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPS+NWLIS+SKY RALD++YDK
Sbjct: 408 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDK 467
Query: 363 HYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGYSP 542
H+ EFV LRTK EILQEE DL+EIVQLVGK SLAE+DKITLEVA+LIKDDFLQQNGY+P
Sbjct: 468 HFTEFVPLRTKAKEILQEEGDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTP 527
Query: 543 YDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSMKFK 722
YD+FCPFYKTVGML NMI FYD AR AVETT+QSD+KITWS+IRE M + +YK+SSMKFK
Sbjct: 528 YDRFCPFYKTVGMLSNMISFYDMARRAVETTAQSDNKITWSIIREHMGEILYKLSSMKFK 587
Query: 723 DPVKDGKEKILHDFDELYEEISNGFRNLED 812
DPVKDG+ KI D+ +L E++ N FR+LED
Sbjct: 588 DPVKDGEAKIKADYAQLLEDMQNAFRSLED 617
>sp|Q27331|VATA2_DROME Vacuolar ATP synthase catalytic subunit A isoform 2 (V-ATPase A
subunit 2) (Vacuolar proton pump alpha subunit 2)
(V-ATPase 69 kDa subunit 2)
Length = 614
Score = 450 bits (1158), Expect = e-126
Identities = 218/270 (80%), Positives = 249/270 (92%)
Frame = +3
Query: 3 DSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVTIV 182
DSTSRWAEALREISGRLAEMP +SGYPAYLGARLASFYERAGRV+C+G P ER+GSV+IV
Sbjct: 346 DSTSRWAEALREISGRLAEMPRDSGYPAYLGARLASFYERAGRVKCLGNP-EREGSVSIV 404
Query: 183 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFYDK 362
GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLIS+SKY RALDDFYDK
Sbjct: 405 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYDK 464
Query: 363 HYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGYSP 542
++ EFV LRTK EILQEEEDLSEIVQLVGK SLAE+DKITLEVA+L+KDDFLQQN YS
Sbjct: 465 NFPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSS 524
Query: 543 YDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSMKFK 722
YD+FCPFYKTVGML+N+I FYD ARH+VE+T+QS++KITW++IREAM + +Y++SSMKFK
Sbjct: 525 YDRFCPFYKTVGMLRNIIDFYDMARHSVESTAQSENKITWNVIREAMGNIMYQLSSMKFK 584
Query: 723 DPVKDGKEKILHDFDELYEEISNGFRNLED 812
DPVKDG+ KI DF++L+E++ FRNLED
Sbjct: 585 DPVKDGEAKIKADFEQLHEDLQQAFRNLED 614
>sp|P48602|VATA1_DROME Vacuolar ATP synthase catalytic subunit A isoform 1 (V-ATPase A
subunit 1) (Vacuolar proton pump alpha subunit 1)
(V-ATPase 69 kDa subunit 1)
Length = 614
Score = 450 bits (1157), Expect = e-126
Identities = 216/270 (80%), Positives = 249/270 (92%)
Frame = +3
Query: 3 DSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVTIV 182
DSTSRWAEALREISGRLAEMPA+SGYPAYLGARLA+FYERAGRV+C+G P ER+GSV+IV
Sbjct: 346 DSTSRWAEALREISGRLAEMPADSGYPAYLGARLATFYERAGRVKCLGNP-EREGSVSIV 404
Query: 183 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFYDK 362
GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLIS+SKY RALD++YDK
Sbjct: 405 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDEYYDK 464
Query: 363 HYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGYSP 542
+Y EFV LRTK EILQEEEDLSEIVQLVGK SLAE+DK+TLEVA+L+KDDFLQQN YSP
Sbjct: 465 NYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKVTLEVAKLLKDDFLQQNSYSP 524
Query: 543 YDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSMKFK 722
YD+ CPFYKTVGML+N++ FY+ ARHAVE+T+QSD+KITW+ IRE+M +Y++SSMKFK
Sbjct: 525 YDRVCPFYKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRESMGGIMYQLSSMKFK 584
Query: 723 DPVKDGKEKILHDFDELYEEISNGFRNLED 812
DPVKDG++KI D+D+LYE++ FRNLED
Sbjct: 585 DPVKDGEQKIKADYDQLYEDLQQAFRNLED 614
>sp|O16109|VATA_AEDAE Vacuolar ATP synthase catalytic subunit A (V-ATPase A subunit)
(Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa
subunit)
Length = 615
Score = 434 bits (1117), Expect = e-121
Identities = 216/271 (79%), Positives = 244/271 (90%), Gaps = 1/271 (0%)
Frame = +3
Query: 3 DSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVTIV 182
DSTSRWAEALREISGRLAEMPA+SGYPAYLGARLASFYERAGRV+C+G P ER+GSV+IV
Sbjct: 347 DSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNP-EREGSVSIV 405
Query: 183 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFYDK 362
GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLIS+SKY RALDDFYDK
Sbjct: 406 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYDK 465
Query: 363 HYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGYSP 542
++ EFV K EILQEEEDLSEIVQLVGK SLAE+DKITLEVA+L+KDDFLQQN YS
Sbjct: 466 NFQEFVPTAYKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSA 525
Query: 543 YDKFCPFYKTVG-MLKNMIHFYDQARHAVETTSQSDSKITWSMIREAMNDTIYKISSMKF 719
YD+FCPFYKTVG ML+NMI FYD ARHAVETT+QS++KITW++IR++M + +Y++SSMKF
Sbjct: 526 YDRFCPFYKTVGRMLRNMIGFYDMARHAVETTAQSENKITWNVIRDSMGNILYQLSSMKF 585
Query: 720 KDPVKDGKEKILHDFDELYEEISNGFRNLED 812
KDP + K KI DFD+LYE++ FRNLED
Sbjct: 586 KDPGRMAK-KIKADFDQLYEDLQQAFRNLED 615
>sp|P49087|VATA_MAIZE Vacuolar ATP synthase catalytic subunit A (V-ATPase A subunit)
(Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa
subunit)
Length = 561
Score = 379 bits (973), Expect = e-105
Identities = 183/271 (67%), Positives = 229/271 (84%), Gaps = 1/271 (0%)
Frame = +3
Query: 3 DSTSRWAEALREISGRLAEMPAESGYPAYLGARLASFYERAGRVQCIGGPDERQGSVTIV 182
DSTSRWAEALREISGRLAEMPA+SGYPAYL ARLASFYERAG+V+C+G PD R GSVTIV
Sbjct: 290 DSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGSPD-RNGSVTIV 348
Query: 183 GAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISHSKYTRALDDFYDK 362
GAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLIS+SKY++AL+ FY+K
Sbjct: 349 GAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALESFYEK 408
Query: 363 HYNEFVALRTKTSEILQEEEDLSEIVQLVGKGSLAESDKITLEVARLIKDDFLQQNGYSP 542
+F+ +RTK E+LQ E+DL+EIVQLVGK +LAESDKITLE A+L+++D+L QN ++P
Sbjct: 409 FDPDFIDIRTKAREVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTP 468
Query: 543 YDKFCPFYKTVGMLKNMIHFYDQARHAVETTSQSDS-KITWSMIREAMNDTIYKISSMKF 719
YDKFCPFYK+V M++N+IHF A AVE + +D KIT+S+I+ + D Y++ S KF
Sbjct: 469 YDKFCPFYKSVWMMRNIIHFNTLANQAVERAAGTDGHKITYSVIKHRLGDLFYRLVSQKF 528
Query: 720 KDPVKDGKEKILHDFDELYEEISNGFRNLED 812
+DP +G+E ++ F +LY++++ GFRNLED
Sbjct: 529 EDPA-EGEEALVGKFKKLYDDLTTGFRNLED 558
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,449,297
Number of Sequences: 369166
Number of extensions: 2333351
Number of successful extensions: 8115
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7742
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)