Planaria EST Database

DrC_00837

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00837
         (1663 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P19483|ATPA1_BOVIN  ATP synthase alpha chain heart isofor...   858   0.0  
sp|P15999|ATPA_RAT  ATP synthase alpha chain, mitochondrial ...   858   0.0  
sp|Q03265|ATPA_MOUSE  ATP synthase alpha chain, mitochondria...   858   0.0  
sp|P25705|ATPA_HUMAN  ATP synthase alpha chain, mitochondria...   854   0.0  
sp|P35381|ATPA_DROME  ATP synthase alpha chain, mitochondria...   832   0.0  
sp|P08428|ATPA_XENLA  ATP synthase alpha chain, mitochondria...   822   0.0  
sp|P49375|ATPA_KLULA  ATP synthase alpha chain, mitochondria...   733   0.0  
sp|P24487|ATPA_SCHPO  ATP synthase alpha chain, mitochondria...   733   0.0  
sp|P07251|ATPA_YEAST  ATP synthase alpha chain, mitochondria...   729   0.0  
sp|P37211|ATPA_NEUCR  ATP synthase alpha chain, mitochondria...   721   0.0  

>sp|P19483|ATPA1_BOVIN ATP synthase alpha chain heart isoform, mitochondrial precursor
          Length = 553

 Score =  858 bits (2218), Expect = 0.0
 Identities = 441/520 (84%), Positives = 476/520 (91%), Gaps = 2/520 (0%)
 Frame = +1

Query: 58   ARQIHLSNPL--NAEIPEVTSILESAIMGQSSQVSLEETGRVLSIGDGIARVYGLKNIQA 231
            AR +H SN         EV+SILE  I+G  + V LEETGRVLSIGDGIARV+GL+N+QA
Sbjct: 33   ARNLHASNSRLQKTGTAEVSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQA 92

Query: 232  EEMVEFSSGLKGMALNLERDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPIGDELLGRVVD 411
            EEMVEFSSGLKGM+LNLE DNVGVVVFGNDKLIKEGD+VKRTGAIVDVP+G+ELLGRVVD
Sbjct: 93   EEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVD 152

Query: 412  ALGNPIDGKGPFTKGLRARVGLKAPGIIPRTSVKEPMQTGVKAVDSLVPIGRGQRELIIG 591
            ALGN IDGKGP     R RVGLKAPGIIPR SV+EPMQTG+KAVDSLVPIGRGQRELIIG
Sbjct: 153  ALGNAIDGKGPIGSKARRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIG 212

Query: 592  DRQTGKTAIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLSNADAMKYT 771
            DRQTGKT+IAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRL++ADAMKYT
Sbjct: 213  DRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYT 272

Query: 772  IVVSATASDAAPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPP 951
            IVVSATASDAAPLQYL+PYSGC+MGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPP
Sbjct: 273  IVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPP 332

Query: 952  GREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSAYIPTNVISITDGQ 1131
            GREAYPGDVFYLHSRLLERAAKM+D +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQ
Sbjct: 333  GREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQ 392

Query: 1132 IFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQYREVAAFAQFGSD 1311
            IFLETELFYKGIRPAINVGLSVSRVGSAAQT+AMKQVAG MKLELAQYREVAAFAQFGSD
Sbjct: 393  IFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSD 452

Query: 1312 LDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKMDPSKITKFEQEYL 1491
            LDA+TQQLL+RGVRLTELLKQGQY PMAIE+Q+ VIYAGVRGYLDK++PSKITKFE  +L
Sbjct: 453  LDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFL 512

Query: 1492 KNVLVNHQDLLKDIRESGVISEANDAKMKKIVTDFVASLE 1611
             +V+  HQ LL  IR  G ISE +DAK+K+IVT+F+A  E
Sbjct: 513  SHVISQHQALLSKIRTDGKISEESDAKLKEIVTNFLAGFE 552

>sp|P15999|ATPA_RAT ATP synthase alpha chain, mitochondrial precursor
          Length = 543

 Score =  858 bits (2217), Expect = 0.0
 Identities = 440/519 (84%), Positives = 477/519 (91%), Gaps = 2/519 (0%)
 Frame = +1

Query: 61   RQIHLSNPL--NAEIPEVTSILESAIMGQSSQVSLEETGRVLSIGDGIARVYGLKNIQAE 234
            R +H SN         E++SILE  I+G  + V LEETGRVLSIGDGIARV+GL+N+QAE
Sbjct: 24   RNLHASNTRLQKTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAE 83

Query: 235  EMVEFSSGLKGMALNLERDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPIGDELLGRVVDA 414
            EMVEFSSGLKGM+LNLE DNVGVVVFGNDKLIKEGD+VKRTGAIVDVP+GDELLGRVVDA
Sbjct: 84   EMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGDELLGRVVDA 143

Query: 415  LGNPIDGKGPFTKGLRARVGLKAPGIIPRTSVKEPMQTGVKAVDSLVPIGRGQRELIIGD 594
            LGN IDGKGP    +R RVGLKAPGIIPR SV+EPMQTG+KAVDSLVPIGRGQRELIIGD
Sbjct: 144  LGNAIDGKGPVGSKIRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGD 203

Query: 595  RQTGKTAIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLSNADAMKYTI 774
            RQTGKT+IAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRL++ADAMKYTI
Sbjct: 204  RQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTI 263

Query: 775  VVSATASDAAPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPG 954
            VVSATASDAAPLQYL+PYSGC+MGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPG
Sbjct: 264  VVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPG 323

Query: 955  REAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSAYIPTNVISITDGQI 1134
            REAYPGDVFYLHSRLLERAAKM+D +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQI
Sbjct: 324  REAYPGDVFYLHSRLLERAAKMNDSFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQI 383

Query: 1135 FLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQYREVAAFAQFGSDL 1314
            FLETELFYKGIRPAINVGLSVSRVGSAAQT+AMKQVAG MKLELAQYREVAAFAQFGSDL
Sbjct: 384  FLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDL 443

Query: 1315 DASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKMDPSKITKFEQEYLK 1494
            DA+TQQLL+RGVRLTELLKQGQY PMAIE+Q+ VIYAGVRGYLDK++PSKITKFE  +L 
Sbjct: 444  DAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFESAFLS 503

Query: 1495 NVLVNHQDLLKDIRESGVISEANDAKMKKIVTDFVASLE 1611
            +V+  HQ LL +IR  G ISE +DAK+K+IVT+F+A  E
Sbjct: 504  HVVSQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGFE 542

>sp|Q03265|ATPA_MOUSE ATP synthase alpha chain, mitochondrial precursor
          Length = 553

 Score =  858 bits (2217), Expect = 0.0
 Identities = 441/520 (84%), Positives = 477/520 (91%), Gaps = 2/520 (0%)
 Frame = +1

Query: 58   ARQIHLSNPL--NAEIPEVTSILESAIMGQSSQVSLEETGRVLSIGDGIARVYGLKNIQA 231
            AR +H SN         E++SILE  I+G  + V LEETGRVLSIGDGIARV+GL+N+QA
Sbjct: 33   ARNLHASNTRLQKTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQA 92

Query: 232  EEMVEFSSGLKGMALNLERDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPIGDELLGRVVD 411
            EEMVEFSSGLKGM+LNLE DNVGVVVFGNDKLIKEGDVVKRTGAIVDVP+G+ELLGRVVD
Sbjct: 93   EEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPVGEELLGRVVD 152

Query: 412  ALGNPIDGKGPFTKGLRARVGLKAPGIIPRTSVKEPMQTGVKAVDSLVPIGRGQRELIIG 591
            ALGN IDGKGP     R RVGLKAPGIIPR SV+EPMQTG+KAVDSLVPIGRGQRELIIG
Sbjct: 153  ALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIG 212

Query: 592  DRQTGKTAIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLSNADAMKYT 771
            DRQTGKT+IAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRL++ADAMKYT
Sbjct: 213  DRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYT 272

Query: 772  IVVSATASDAAPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPP 951
            IVVSATASDAAPLQYL+PYSGC+MGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPP
Sbjct: 273  IVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPP 332

Query: 952  GREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSAYIPTNVISITDGQ 1131
            GREAYPGDVFYLHSRLLERAAKM+D +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQ
Sbjct: 333  GREAYPGDVFYLHSRLLERAAKMNDSFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQ 392

Query: 1132 IFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQYREVAAFAQFGSD 1311
            IFLETELFYKGIRPAINVGLSVSRVGSAAQT+AMKQVAG MKLELAQYREVAAFAQFGSD
Sbjct: 393  IFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSD 452

Query: 1312 LDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKMDPSKITKFEQEYL 1491
            LDA+TQQLL+RGVRLTELLKQGQY PMAIE+Q+ VIYAGVRGYLDK++PSKITKFE  +L
Sbjct: 453  LDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFL 512

Query: 1492 KNVLVNHQDLLKDIRESGVISEANDAKMKKIVTDFVASLE 1611
             +V+  HQ LL +IR  G ISE +DAK+K+IVT+F+A  E
Sbjct: 513  SHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGFE 552

>sp|P25705|ATPA_HUMAN ATP synthase alpha chain, mitochondrial precursor
          Length = 553

 Score =  854 bits (2206), Expect = 0.0
 Identities = 439/520 (84%), Positives = 475/520 (91%), Gaps = 2/520 (0%)
 Frame = +1

Query: 58   ARQIHLSNP--LNAEIPEVTSILESAIMGQSSQVSLEETGRVLSIGDGIARVYGLKNIQA 231
            AR  H SN         E++SILE  I+G  + V LEETGRVLSIGDGIARV+GL+N+QA
Sbjct: 33   ARNFHASNTHLQKTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQA 92

Query: 232  EEMVEFSSGLKGMALNLERDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPIGDELLGRVVD 411
            EEMVEFSSGLKGM+LNLE DNVGVVVFGNDKLIKEGD+VKRTGAIVDVP+G+ELLGRVVD
Sbjct: 93   EEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVD 152

Query: 412  ALGNPIDGKGPFTKGLRARVGLKAPGIIPRTSVKEPMQTGVKAVDSLVPIGRGQRELIIG 591
            ALGN IDGKGP     R RVGLKAPGIIPR SV+EPMQTG+KAVDSLVPIGRGQRELIIG
Sbjct: 153  ALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIG 212

Query: 592  DRQTGKTAIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLSNADAMKYT 771
            DRQTGKT+IAIDTIINQKRFNDG+DEKKKLYCIYVAIGQKRSTVAQLVKRL++ADAMKYT
Sbjct: 213  DRQTGKTSIAIDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYT 272

Query: 772  IVVSATASDAAPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPP 951
            IVVSATASDAAPLQYL+PYSGC+MGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPP
Sbjct: 273  IVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPP 332

Query: 952  GREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSAYIPTNVISITDGQ 1131
            GREAYPGDVFYLHSRLLERAAKM+D +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQ
Sbjct: 333  GREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQ 392

Query: 1132 IFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQYREVAAFAQFGSD 1311
            IFLETELFYKGIRPAINVGLSVSRVGSAAQT+AMKQVAG MKLELAQYREVAAFAQFGSD
Sbjct: 393  IFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSD 452

Query: 1312 LDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKMDPSKITKFEQEYL 1491
            LDA+TQQLL+RGVRLTELLKQGQY PMAIE+Q+ VIYAGVRGYLDK++PSKITKFE  +L
Sbjct: 453  LDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFL 512

Query: 1492 KNVLVNHQDLLKDIRESGVISEANDAKMKKIVTDFVASLE 1611
             +V+  HQ LL  IR  G ISE +DAK+K+IVT+F+A  E
Sbjct: 513  SHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGFE 552

>sp|P35381|ATPA_DROME ATP synthase alpha chain, mitochondrial precursor (Protein
            bellwether)
          Length = 552

 Score =  832 bits (2150), Expect = 0.0
 Identities = 425/519 (81%), Positives = 471/519 (90%)
 Frame = +1

Query: 58   ARQIHLSNPLNAEIPEVTSILESAIMGQSSQVSLEETGRVLSIGDGIARVYGLKNIQAEE 237
            AR++H+++   +   E+++ILE  I+G + +  LEETGRVLSIGDGIARVYGL NIQA+E
Sbjct: 36   ARKLHVASTQRSA--EISNILEERILGVAPKADLEETGRVLSIGDGIARVYGLNNIQADE 93

Query: 238  MVEFSSGLKGMALNLERDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPIGDELLGRVVDAL 417
            MVEFSSGLKGMALNLE DNVGVVVFGNDKLIK+GD+VKRTGAIVDVP+GDELLGRVVDAL
Sbjct: 94   MVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKQGDIVKRTGAIVDVPVGDELLGRVVDAL 153

Query: 418  GNPIDGKGPFTKGLRARVGLKAPGIIPRTSVKEPMQTGVKAVDSLVPIGRGQRELIIGDR 597
            GN IDGKG      R RVG+KAPGIIPR SV+EPMQTG+KAVDSLVPIGRGQRELIIGDR
Sbjct: 154  GNAIDGKGAINTKDRFRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDR 213

Query: 598  QTGKTAIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLSNADAMKYTIV 777
            QTGKTA+AIDTIINQKRFN+  DE KKLYCIYVAIGQKRSTVAQ+VKRL+++ AM Y+++
Sbjct: 214  QTGKTALAIDTIINQKRFNEAQDESKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYSVI 273

Query: 778  VSATASDAAPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGR 957
            VSATASDAAPLQYL+PYSGCAMGEYFRD GKHALIIYDDLSKQAVAYRQMSLLLRRPPGR
Sbjct: 274  VSATASDAAPLQYLAPYSGCAMGEYFRDKGKHALIIYDDLSKQAVAYRQMSLLLRRPPGR 333

Query: 958  EAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIF 1137
            EAYPGDVFYLHSRLLERAAKMS   GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIF
Sbjct: 334  EAYPGDVFYLHSRLLERAAKMSPAMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIF 393

Query: 1138 LETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQYREVAAFAQFGSDLD 1317
            LETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAG MKLELAQYREVAAFAQFGSDLD
Sbjct: 394  LETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLD 453

Query: 1318 ASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKMDPSKITKFEQEYLKN 1497
            A+TQQLLNRGVRLTELLKQGQYVPMAIEDQ+ VIY GVRG+LDKMDP+KITKFE+E+L++
Sbjct: 454  AATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGVRGHLDKMDPAKITKFEKEFLQH 513

Query: 1498 VLVNHQDLLKDIRESGVISEANDAKMKKIVTDFVASLEG 1614
            +  + Q LL  I + G ISEA+DAK+K IV  F+++ +G
Sbjct: 514  IKTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTFQG 552

>sp|P08428|ATPA_XENLA ATP synthase alpha chain, mitochondrial precursor
          Length = 545

 Score =  822 bits (2124), Expect = 0.0
 Identities = 428/520 (82%), Positives = 461/520 (88%), Gaps = 3/520 (0%)
 Frame = +1

Query: 61   RQIHLSN---PLNAEIPEVTSILESAIMGQSSQVSLEETGRVLSIGDGIARVYGLKNIQA 231
            R IH S    P  +   EV+SILE  I+G  +   LEETGRVLSIGDGIARVYGL+N+QA
Sbjct: 34   RNIHASGVWPPEKSGTAEVSSILEERILGADTTADLEETGRVLSIGDGIARVYGLRNVQA 93

Query: 232  EEMVEFSSGLKGMALNLERDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPIGDELLGRVVD 411
            EEMVEFSSGLKGM+LNLE DNVGVV   NDKLIKEGD+VKRTGAIVDVP+GDELLGRVVD
Sbjct: 94   EEMVEFSSGLKGMSLNLEPDNVGVVGLANDKLIKEGDIVKRTGAIVDVPVGDELLGRVVD 153

Query: 412  ALGNPIDGKGPFTKGLRARVGLKAPGIIPRTSVKEPMQTGVKAVDSLVPIGRGQRELIIG 591
            ALGN IDGKGP     R RVGLKAPGIIPR SV+EPMQTG+KAVDSLVPIGRGQRELIIG
Sbjct: 154  ALGNTIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIG 213

Query: 592  DRQTGKTAIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLSNADAMKYT 771
            DRQTGKT+IAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKR         L++ADAMKYT
Sbjct: 214  DRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKR---------LTDADAMKYT 264

Query: 772  IVVSATASDAAPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPP 951
            IVVS TASDAAPLQYL+PYSGC+MGEYFRDNG HALIIYDDLSKQAVAYRQMSLLLRRPP
Sbjct: 265  IVVSRTASDAAPLQYLAPYSGCSMGEYFRDNGTHALIIYDDLSKQAVAYRQMSLLLRRPP 324

Query: 952  GREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSAYIPTNVISITDGQ 1131
            GREAYPGDVFYLHSRLLERAAKM+D +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQ
Sbjct: 325  GREAYPGDVFYLHSRLLERAAKMNDHFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQ 384

Query: 1132 IFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQYREVAAFAQFGSD 1311
            IFLETELFYKGIRPAINVGLSVSRVGSAAQT+AMKQVAG MKLELAQYREVAAFAQFGSD
Sbjct: 385  IFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSD 444

Query: 1312 LDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKMDPSKITKFEQEYL 1491
            LDA+TQQLLNRGVRLTELLKQGQYVPMAIE+Q+ VIYAGVRG+LDKM+PSKITKFE  +L
Sbjct: 445  LDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGVRGHLDKMEPSKITKFESAFL 504

Query: 1492 KNVLVNHQDLLKDIRESGVISEANDAKMKKIVTDFVASLE 1611
             +V   HQ+LL  IR  G ISE  DAK+K+IV +F+++ E
Sbjct: 505  AHVKSQHQELLATIRADGKISEQADAKLKEIVLNFLSTFE 544

>sp|P49375|ATPA_KLULA ATP synthase alpha chain, mitochondrial precursor
          Length = 548

 Score =  733 bits (1893), Expect = 0.0
 Identities = 369/505 (73%), Positives = 436/505 (86%)
 Frame = +1

Query: 91   AEIPEVTSILESAIMGQSSQVSLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGM 270
            A+  EV+SILE  I G S + +L ETGRVL++GDGIARV+GL N+QAEE+VEFSSG+KGM
Sbjct: 43   AQPTEVSSILEERIRGVSEESNLNETGRVLAVGDGIARVFGLNNVQAEELVEFSSGVKGM 102

Query: 271  ALNLERDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPIGDELLGRVVDALGNPIDGKGPFT 450
            ALNLE   VG+V+FG+D+L+KEG+VVKRTG IVDV +G ELLGRVVDALGNPIDGKGP  
Sbjct: 103  ALNLEPGQVGIVLFGSDRLVKEGEVVKRTGKIVDVGVGPELLGRVVDALGNPIDGKGPIN 162

Query: 451  KGLRARVGLKAPGIIPRTSVKEPMQTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDT 630
               R+R  +KAPGI+PR SV EP+QTG+K+VD+LVPIGRGQRELIIGDRQTGKTA+A+DT
Sbjct: 163  ASGRSRAQVKAPGILPRRSVHEPVQTGLKSVDALVPIGRGQRELIIGDRQTGKTAVALDT 222

Query: 631  IINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLSNADAMKYTIVVSATASDAAPL 810
            I+NQKR+N+GTDE KKLYC+YVA+GQKRSTVAQLV+ L   DA+KY+I+V+ATAS+AAPL
Sbjct: 223  ILNQKRWNNGTDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDALKYSIIVAATASEAAPL 282

Query: 811  QYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 990
            QY++P++  A+GE+FRDNG+HALIIYDDLSKQAVAYRQ+SLLLRRPPGREAYPGDVFYLH
Sbjct: 283  QYIAPFTAAAIGEWFRDNGRHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLH 342

Query: 991  SRLLERAAKMSDVYGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIR 1170
            SRLLERAAKMS+  GGGSLTALPVIETQ GDVSAYIPTNVISITDGQIFLE ELFYKGIR
Sbjct: 343  SRLLERAAKMSEKNGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIR 402

Query: 1171 PAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQYREVAAFAQFGSDLDASTQQLLNRGV 1350
            PAINVGLSVSRVGSAAQ KA+KQVAG +KL LAQYREVAAFAQFGSDLDAST+Q L RG 
Sbjct: 403  PAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLARGE 462

Query: 1351 RLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKMDPSKITKFEQEYLKNVLVNHQDLLKD 1530
            RLT+LLKQ QY P+A E+Q+ +IYAGV GYLD +D S+I +FE ++L  +  NH +++  
Sbjct: 463  RLTQLLKQNQYSPLAAEEQVPLIYAGVNGYLDNIDISRIAEFETKFLAYLKANHDEIVSA 522

Query: 1531 IRESGVISEANDAKMKKIVTDFVAS 1605
            IRE G +S+   A +K     FVA+
Sbjct: 523  IREKGELSKELLATLKSATESFVAT 547

>sp|P24487|ATPA_SCHPO ATP synthase alpha chain, mitochondrial precursor
          Length = 536

 Score =  733 bits (1891), Expect = 0.0
 Identities = 361/501 (72%), Positives = 438/501 (87%)
 Frame = +1

Query: 103  EVTSILESAIMGQSSQVSLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNL 282
            EV SILE  I G  +Q  + E+GRVLSIGDGIAR+ GL N+QAEE+VEFSSG+KGMALNL
Sbjct: 35   EVPSILEERIRGAYNQAQMMESGRVLSIGDGIARISGLSNVQAEELVEFSSGIKGMALNL 94

Query: 283  ERDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPIGDELLGRVVDALGNPIDGKGPFTKGLR 462
            E D VG V+FGND+L++EG+VVKRT  IVDVP+G+ LLGRVVDALGNPIDGKGP     R
Sbjct: 95   EADTVGCVLFGNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDALGNPIDGKGPIKTTER 154

Query: 463  ARVGLKAPGIIPRTSVKEPMQTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQ 642
             RV LKAPGI+PRTSV EPMQTG+KA+DS+VPIGRGQRELIIGDRQTGKTAIA+DTI+N 
Sbjct: 155  RRVQLKAPGILPRTSVCEPMQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAIALDTILNH 214

Query: 643  KRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLSNADAMKYTIVVSATASDAAPLQYLS 822
            KR+N+ +DE KKLYC+YVA+GQKRSTVAQLV++L   D++KY+I+V+ATAS++APLQYL+
Sbjct: 215  KRWNNSSDESKKLYCVYVAVGQKRSTVAQLVQKLEENDSLKYSIIVAATASESAPLQYLA 274

Query: 823  PYSGCAMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 1002
            P+SGCAMGE+FRDNGKH L++YDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL
Sbjct: 275  PFSGCAMGEWFRDNGKHGLVVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 334

Query: 1003 ERAAKMSDVYGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 1182
            ERAAKMS  +GGGSLTALPVIETQ GDVSAYIPTNVISITDGQIFLE+ELF+KGIRPAIN
Sbjct: 335  ERAAKMSPKHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFFKGIRPAIN 394

Query: 1183 VGLSVSRVGSAAQTKAMKQVAGRMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTE 1362
            VGLSVSRVGSAAQ KAMKQVAG++KL LAQYREVA+FAQFGSDLDA T+  L+RG+RLTE
Sbjct: 395  VGLSVSRVGSAAQVKAMKQVAGQIKLFLAQYREVASFAQFGSDLDAGTRATLDRGLRLTE 454

Query: 1363 LLKQGQYVPMAIEDQIVVIYAGVRGYLDKMDPSKITKFEQEYLKNVLVNHQDLLKDIRES 1542
            LLKQ QY P+A+E+Q+ +IY GV+GYLDK+   ++ +FE +++  +  +  ++++ IR+ 
Sbjct: 455  LLKQPQYSPLAVEEQVPLIYCGVKGYLDKIPVDRVVEFEHKFIPYLRSSGAEIMEAIRKE 514

Query: 1543 GVISEANDAKMKKIVTDFVAS 1605
            GV+S+  +  +K ++ +F++S
Sbjct: 515  GVLSKTTEDSLKAVIKEFLSS 535

>sp|P07251|ATPA_YEAST ATP synthase alpha chain, mitochondrial precursor
          Length = 545

 Score =  729 bits (1881), Expect = 0.0
 Identities = 368/505 (72%), Positives = 435/505 (86%)
 Frame = +1

Query: 91   AEIPEVTSILESAIMGQSSQVSLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGM 270
            A+  EV+SILE  I G S + +L ETGRVL++GDGIARV+GL NIQAEE+VEFSSG+KGM
Sbjct: 40   AQPTEVSSILEERIKGVSDEANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGM 99

Query: 271  ALNLERDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPIGDELLGRVVDALGNPIDGKGPFT 450
            ALNLE   VG+V+FG+D+L+KEG++VKRTG IVDVP+G  LLGRVVDALGNPIDGKGP  
Sbjct: 100  ALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPID 159

Query: 451  KGLRARVGLKAPGIIPRTSVKEPMQTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDT 630
               R+R  +KAPGI+PR SV EP+QTG+KAVD+LVPIGRGQRELIIGDRQTGKTA+A+DT
Sbjct: 160  AAGRSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDT 219

Query: 631  IINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLSNADAMKYTIVVSATASDAAPL 810
            I+NQKR+N+G+DE KKLYC+YVA+GQKRSTVAQLV+ L   DAMKY+I+V+ATAS+AAPL
Sbjct: 220  ILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPL 279

Query: 811  QYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 990
            QYL+P++  ++GE+FRDNGKHALI+YDDLSKQAVAYRQ+SLLLRRPPGREAYPGDVFYLH
Sbjct: 280  QYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLH 339

Query: 991  SRLLERAAKMSDVYGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIR 1170
            SRLLERAAK+S+  G GSLTALPVIETQ GDVSAYIPTNVISITDGQIFLE ELFYKGIR
Sbjct: 340  SRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIR 399

Query: 1171 PAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQYREVAAFAQFGSDLDASTQQLLNRGV 1350
            PAINVGLSVSRVGSAAQ KA+KQVAG +KL LAQYREVAAFAQFGSDLDAST+Q L RG 
Sbjct: 400  PAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYREVAAFAQFGSDLDASTKQTLVRGE 459

Query: 1351 RLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKMDPSKITKFEQEYLKNVLVNHQDLLKD 1530
            RLT+LLKQ QY P+A E+Q+ +IYAGV G+LD ++ S+I +FE  +L  +  NH +LL +
Sbjct: 460  RLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSNHNELLTE 519

Query: 1531 IRESGVISEANDAKMKKIVTDFVAS 1605
            IRE G +S+   A +K     FVA+
Sbjct: 520  IREKGELSKELLASLKSATESFVAT 544

>sp|P37211|ATPA_NEUCR ATP synthase alpha chain, mitochondrial precursor
          Length = 551

 Score =  721 bits (1860), Expect = 0.0
 Identities = 359/524 (68%), Positives = 437/524 (83%)
 Frame = +1

Query: 43   SPISLARQIHLSNPLNAEIPEVTSILESAIMGQSSQVSLEETGRVLSIGDGIARVYGLKN 222
            +P+  A Q        A   EV+SILE  I G   + +L ETGRVLS+GDGIARV+G+ N
Sbjct: 28   APVVSAVQARTYADAKATPTEVSSILEQRIRGVQEESNLAETGRVLSVGDGIARVHGMAN 87

Query: 223  IQAEEMVEFSSGLKGMALNLERDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPIGDELLGR 402
            +QAEE+VEF+SG+KGM +NLE   VGVV+FG+D+L+KEG+ VKRTG IVDVP+G ELLGR
Sbjct: 88   VQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVDVPVGPELLGR 147

Query: 403  VVDALGNPIDGKGPFTKGLRARVGLKAPGIIPRTSVKEPMQTGVKAVDSLVPIGRGQREL 582
            V+DALGNPIDGKGP     + R  LKAPGI+PR SV +P+QTG+K+VD++VPIGRGQREL
Sbjct: 148  VIDALGNPIDGKGPINCKEKRRAQLKAPGILPRQSVNQPVQTGLKSVDAMVPIGRGQREL 207

Query: 583  IIGDRQTGKTAIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLSNADAM 762
            IIGDRQTGKTA+A+D I+NQKR+N G+DE KKLYC+YVA+GQKRSTVAQLVK L   DAM
Sbjct: 208  IIGDRQTGKTAVALDAILNQKRWNSGSDEDKKLYCVYVAVGQKRSTVAQLVKTLEENDAM 267

Query: 763  KYTIVVSATASDAAPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 942
            KY+IVV+ATAS+AAPLQYL+P++G  +GEYFRDNGKH+L+I+DDL+KQAVAYRQMSLLLR
Sbjct: 268  KYSIVVAATASEAAPLQYLAPFTGACVGEYFRDNGKHSLVIFDDLTKQAVAYRQMSLLLR 327

Query: 943  RPPGREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSAYIPTNVISIT 1122
            RPPGREAYPGDVFYLHSRLLERAAKM+  +GGGS+TALPVIETQ GDVSAYIPTNVISIT
Sbjct: 328  RPPGREAYPGDVFYLHSRLLERAAKMNKTHGGGSMTALPVIETQGGDVSAYIPTNVISIT 387

Query: 1123 DGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQYREVAAFAQF 1302
            DGQIFLE+ELFYKG+RPAINVGLSVSRVGSAAQ KAMKQVAG +KL LAQYREVAAFAQF
Sbjct: 388  DGQIFLESELFYKGVRPAINVGLSVSRVGSAAQLKAMKQVAGSLKLFLAQYREVAAFAQF 447

Query: 1303 GSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKMDPSKITKFEQ 1482
            GSDLDA+T+Q LNRG RLTELLKQ QY PMA+ + + +I+AGV G+LD +  +KI ++E 
Sbjct: 448  GSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGVNGFLDSVPVAKILQWEA 507

Query: 1483 EYLKNVLVNHQDLLKDIRESGVISEANDAKMKKIVTDFVASLEG 1614
            ++L ++  N  +++  I + G IS+  +AK++ ++  F  S  G
Sbjct: 508  DFLAHLKTNEPEIMATIDKEGAISKDLEAKLRDVIQTFTKSFLG 551

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 179,825,406
Number of Sequences: 369166
Number of extensions: 3814403
Number of successful extensions: 11910
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11283
length of database: 68,354,980
effective HSP length: 116
effective length of database: 46,925,720
effective search space used: 20506539640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00837

  1. Dr_sW_024_L01
  2. Dr_sW_021_E03
  3. Dr_sW_009_L21
  4. Dr_sW_028_F14
  5. Dr_sW_006_C22
  6. Dr_sW_015_E22
  7. Dr_sW_016_M05